RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 RD3LP0DJH9 198 aa7.76□□□□□ -1.17
COL1A1-210ENST00000504289 FOSL1P15407 271 aa7.76□□□□□ -1.17
COL1A1-210ENST00000504289 HOXA5P20719 270 aa7.76□□□□□ -1.17
COL1A1-210ENST00000504289 GATA3P23771 443 aa7.76□□□□□ -1.17
COL1A1-210ENST00000504289 MYCNOSP40205 109 aa7.76□□□□□ -1.17
COL1A1-210ENST00000504289 CNN1P51911 297 aaKnown RBP7.76□□□□□ -1.17
COL1A1-210ENST00000504289 SNRPEP62304 92 aaKnown RBP7.76□□□□□ -1.17
COL1A1-210ENST00000504289 SUMO1P63165 101 aaKnown RBP7.76□□□□□ -1.17
COL1A1-210ENST00000504289 COX19Q49B96 90 aa7.76□□□□□ -1.17
COL1A1-210ENST00000504289 ZFP82Q8N141 532 aa7.76□□□□□ -1.17
COL1A1-210ENST00000504289 LYPD1Q8N2G4 141 aa7.76□□□□□ -1.17
COL1A1-210ENST00000504289 VN1R17PQ8TDU5 208 aa7.76□□□□□ -1.17
COL1A1-210ENST00000504289 AJUBAQ96IF1 538 aa7.76□□□□□ -1.17
COL1A1-210ENST00000504289 RBM14Q96PK6 669 aaKnown RBP7.76□□□□□ -1.17
COL1A1-210ENST00000504289 CHRDL1Q9BU40 450 aa7.76□□□□□ -1.17
COL1A1-210ENST00000504289 DERL1Q9BUN8 251 aa7.76□□□□□ -1.17
COL1A1-210ENST00000504289 MRPL27Q9P0M9 148 aaKnown RBP7.76□□□□□ -1.17
COL1A1-210ENST00000504289 KLF12Q9Y4X4 402 aa7.76□□□□□ -1.17
COL1A1-210ENST00000504289 WNK2Q9Y3S1 2297 aa7.75□□□□□ -1.17
COL1A1-210ENST00000504289 A0A1W2PRD5 423 aa7.75□□□□□ -1.17
COL1A1-210ENST00000504289 A0A1W2PRF3 423 aa7.75□□□□□ -1.17
COL1A1-210ENST00000504289 A0A1W2PRM7 423 aa7.75□□□□□ -1.17
COL1A1-210ENST00000504289 NCBP2LA6PVI3 153 aaKnown RBP7.75□□□□□ -1.17
COL1A1-210ENST00000504289 PHOX2AO14813 284 aa7.75□□□□□ -1.17
COL1A1-210ENST00000504289 GCGP01275 180 aa7.75□□□□□ -1.17
COL1A1-210ENST00000504289 IGKV1-17P01599 117 aa7.75□□□□□ -1.17
COL1A1-210ENST00000504289 NBEAP1P0C6P0 100 aa7.75□□□□□ -1.17
COL1A1-210ENST00000504289 PSG1P11464 419 aa7.75□□□□□ -1.17
COL1A1-210ENST00000504289 ORM2P19652 201 aa7.75□□□□□ -1.17
COL1A1-210ENST00000504289 CRYBB3P26998 211 aa7.75□□□□□ -1.17
COL1A1-210ENST00000504289 SAA4P35542 130 aa7.75□□□□□ -1.17
COL1A1-210ENST00000504289 PRB3Q04118 309 aaPredicted RBP7.75□□□□□ -1.17
COL1A1-210ENST00000504289 DYNAPQ8N1N2 210 aa7.75□□□□□ -1.17
COL1A1-210ENST00000504289 ARL6IP6Q8N6S5 226 aa7.75□□□□□ -1.17
COL1A1-210ENST00000504289 LINC00469Q8N7U9 141 aa7.75□□□□□ -1.17
COL1A1-210ENST00000504289 Q8N9W7 124 aa7.75□□□□□ -1.17
COL1A1-210ENST00000504289 OR1B1Q8NGR6 318 aa7.75□□□□□ -1.17
COL1A1-210ENST00000504289 FAM110DQ8TAY7 271 aaPredicted RBP7.75□□□□□ -1.17
COL1A1-210ENST00000504289 ELOVL1Q9BW60 279 aa7.75□□□□□ -1.17
COL1A1-210ENST00000504289 ARHGAP32A7KAX9 2087 aa7.75□□□□□ -1.17
COL1A1-210ENST00000504289 TRBV9A0A0B4J1U6 114 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 TRBV6-1A0A0K0K1D8 114 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 WI2-2373I1.2A0A1W2PRP0 233 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 PEX7O00628 323 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 HIST1H2BKO60814 126 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 TRGC2P03986 189 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 HIST1H2BJP06899 126 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 SMIM6P0DI80 62 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 HIST1H1EP10412 219 aaKnown RBP7.74□□□□□ -1.17
COL1A1-210ENST00000504289 GP9P14770 177 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 SLC25A16P16260 332 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 HIST1H2BOP23527 126 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 HIST1H2BBP33778 126 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 CDX1P47902 265 aaPredicted RBP7.74□□□□□ -1.17
COL1A1-210ENST00000504289 HIST1H2BDP58876 126 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 HIST1H2BCP62807 126 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 FABP9Q0Z7S8 132 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 HIST2H2BEQ16778 126 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 CENPWQ5EE01 88 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 COA6Q5JTJ3 125 aaKnown RBP7.74□□□□□ -1.17
COL1A1-210ENST00000504289 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.74□□□□□ -1.17
COL1A1-210ENST00000504289 FAM231DQ6ZW35 169 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 ZNF329Q86UD4 541 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 C5orf17Q8NAS9 161 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 SGMS2Q8NHU3 365 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 HIST1H2BHQ93079 126 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 IGF2BP2-AS1Q96M15 143 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 FANCD2OSQ96PS1 177 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 HIST1H2BNQ99877 126 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 HIST1H2BMQ99879 126 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 MEGF9Q9H1U4 602 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 OTORQ9NRC9 128 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 IL36BQ9NZH7 164 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 PITPNC1Q9UKF7 332 aa7.74□□□□□ -1.17
COL1A1-210ENST00000504289 SPTAN1Q13813 2472 aaKnown RBP7.74□□□□□ -1.17
COL1A1-210ENST00000504289 DCHS2Q6V1P9 2916 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 IGHV7-81A0A0B4J1V7 117 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 TRAV5A0A0B4J249 113 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 IGHV1-69DA0A0B4J2H0 117 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 CENPVL3A0A0U1RRI6 287 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 ZNF98A6NK75 572 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 GNG7O60262 68 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 BRI3O95415 125 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 IGHV1-69P01742 117 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 AKR1D1P51857 326 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 CRIP2P52943 208 aaPredicted RBP7.73□□□□□ -1.17
COL1A1-210ENST00000504289 ATP5J2P56134 94 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 PDE6HQ13956 83 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 TMEM183BQ1AE95 376 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 ASPHD1Q5U4P2 390 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 MORN5Q5VZ52 161 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 BPIFA4PQ86YQ2 179 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 ATG101Q9BSB4 218 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 SHANK2-AS3Q9BTD1 123 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 SLC25A39Q9BZJ4 359 aaPredicted RBP7.73□□□□□ -1.17
COL1A1-210ENST00000504289 C21orf62Q9NYP8 219 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 EPDR1Q9UM22 224 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 ABCA1O95477 2261 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 HECTD1Q9ULT8 2610 aa7.73□□□□□ -1.17
COL1A1-210ENST00000504289 PTPN13Q12923 2485 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms