RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 A1L4Q6 167 aa16.8■□□□□ 0.28
UBE2D3-216ENST00000503742 MSMBP08118 114 aa16.8■□□□□ 0.28
UBE2D3-216ENST00000503742 STXBP6Q8NFX7 210 aa16.8■□□□□ 0.28
UBE2D3-216ENST00000503742 HSPB9Q9BQS6 159 aa16.8■□□□□ 0.28
UBE2D3-216ENST00000503742 CSMD1Q96PZ7 3565 aa16.8■□□□□ 0.28
UBE2D3-216ENST00000503742 PGPEP1LA6NFU8 196 aa16.8■□□□□ 0.28
UBE2D3-216ENST00000503742 C9JCJ5 164 aa16.8■□□□□ 0.28
UBE2D3-216ENST00000503742 H7BYZ3 331 aa16.8■□□□□ 0.28
UBE2D3-216ENST00000503742 PFN1P07737 140 aaKnown RBP16.8■□□□□ 0.28
UBE2D3-216ENST00000503742 ZNF48Q96MX3 618 aaPredicted RBP16.8■□□□□ 0.28
UBE2D3-216ENST00000503742 NIT2Q9NQR4 276 aa16.8■□□□□ 0.28
UBE2D3-216ENST00000503742 TRBV24-1A0A075B6N3 115 aa16.79■□□□□ 0.28
UBE2D3-216ENST00000503742 IGHV3OR16-10A0A075B7F0 116 aa16.79■□□□□ 0.28
UBE2D3-216ENST00000503742 TRAV40A0A0B4J280 105 aa16.79■□□□□ 0.28
UBE2D3-216ENST00000503742 CD99P14209 185 aa16.79■□□□□ 0.28
UBE2D3-216ENST00000503742 CRYBB3P26998 211 aa16.79■□□□□ 0.28
UBE2D3-216ENST00000503742 SUMO1P63165 101 aaKnown RBP16.79■□□□□ 0.28
UBE2D3-216ENST00000503742 GSN-AS1Q9NRJ2 163 aa16.79■□□□□ 0.28
UBE2D3-216ENST00000503742 TGOLN2O43493 480 aa16.78■□□□□ 0.28
UBE2D3-216ENST00000503742 RPS10P46783 165 aaKnown RBP16.78■□□□□ 0.28
UBE2D3-216ENST00000503742 OR5T1Q8NG75 326 aa16.78■□□□□ 0.28
UBE2D3-216ENST00000503742 OCC1Q8TAD7 63 aa16.78■□□□□ 0.28
UBE2D3-216ENST00000503742 AURKAIP1Q9NWT8 199 aaPredicted RBP16.78■□□□□ 0.28
UBE2D3-216ENST00000503742 LY96Q9Y6Y9 160 aa16.78■□□□□ 0.28
UBE2D3-216ENST00000503742 RD3LP0DJH9 198 aa16.78■□□□□ 0.28
UBE2D3-216ENST00000503742 SGMS2Q8NHU3 365 aa16.78■□□□□ 0.28
UBE2D3-216ENST00000503742 ELOVL1Q9BW60 279 aa16.78■□□□□ 0.28
UBE2D3-216ENST00000503742 MEGF9Q9H1U4 602 aa16.78■□□□□ 0.28
UBE2D3-216ENST00000503742 HIGD1AQ9Y241 93 aa16.78■□□□□ 0.28
UBE2D3-216ENST00000503742 SLC25A16P16260 332 aa16.77■□□□□ 0.28
UBE2D3-216ENST00000503742 HOXA5P20719 270 aa16.77■□□□□ 0.28
UBE2D3-216ENST00000503742 KLK9Q2XQG4 91 aa16.77■□□□□ 0.28
UBE2D3-216ENST00000503742 PIFOQ8TCI5 191 aa16.77■□□□□ 0.28
UBE2D3-216ENST00000503742 FAM210BQ96KR6 192 aa16.77■□□□□ 0.28
UBE2D3-216ENST00000503742 PYGO2Q9BRQ0 406 aa16.77■□□□□ 0.28
UBE2D3-216ENST00000503742 MRPL27Q9P0M9 148 aaKnown RBP16.77■□□□□ 0.28
UBE2D3-216ENST00000503742 KLK9Q9UKQ9 250 aa16.77■□□□□ 0.28
UBE2D3-216ENST00000503742 FAM208BQ5VWN6 2430 aa16.77■□□□□ 0.28
UBE2D3-216ENST00000503742 F8W735 103 aaPredicted RBP16.77■□□□□ 0.27
UBE2D3-216ENST00000503742 TOMM40O96008 361 aa16.77■□□□□ 0.27
UBE2D3-216ENST00000503742 IGHV4-38-2P0DP08 117 aa16.77■□□□□ 0.27
UBE2D3-216ENST00000503742 LYZP61626 148 aa16.77■□□□□ 0.27
UBE2D3-216ENST00000503742 CLEC12BQ2HXU8 276 aa16.77■□□□□ 0.27
UBE2D3-216ENST00000503742 BRD3OSQ6XYD6 125 aa16.77■□□□□ 0.27
UBE2D3-216ENST00000503742 TRAV30A0A087WSZ9 112 aa16.76■□□□□ 0.27
UBE2D3-216ENST00000503742 B4DSR2 109 aa16.76■□□□□ 0.27
UBE2D3-216ENST00000503742 GP9P14770 177 aa16.76■□□□□ 0.27
UBE2D3-216ENST00000503742 MYCNOSP40205 109 aa16.76■□□□□ 0.27
UBE2D3-216ENST00000503742 GALR1P47211 349 aa16.76■□□□□ 0.27
UBE2D3-216ENST00000503742 MFAP4P55083 255 aa16.76■□□□□ 0.27
UBE2D3-216ENST00000503742 C5orf56Q8N8D9 126 aa16.76■□□□□ 0.27
UBE2D3-216ENST00000503742 THYN1Q9P016 225 aa16.76■□□□□ 0.27
UBE2D3-216ENST00000503742 HELTA6NFD8 242 aa16.75■□□□□ 0.27
UBE2D3-216ENST00000503742 CDX1P47902 265 aaPredicted RBP16.75■□□□□ 0.27
UBE2D3-216ENST00000503742 FAM110DQ8TAY7 271 aaPredicted RBP16.75■□□□□ 0.27
UBE2D3-216ENST00000503742 OR5B12Q96R08 314 aa16.75■□□□□ 0.27
UBE2D3-216ENST00000503742 C7orf69Q9H7B7 122 aa16.75■□□□□ 0.27
UBE2D3-216ENST00000503742 LRRK2Q5S007 2527 aa16.75■□□□□ 0.27
UBE2D3-216ENST00000503742 FBN2P35556 2912 aa16.75■□□□□ 0.27
UBE2D3-216ENST00000503742 A0A096LNT2 108 aa16.75■□□□□ 0.27
UBE2D3-216ENST00000503742 A0A0U1RQK1 487 aa16.75■□□□□ 0.27
UBE2D3-216ENST00000503742 NDUFB8O95169 186 aa16.75■□□□□ 0.27
UBE2D3-216ENST00000503742 YPEL3P61236 119 aaPredicted RBP16.75■□□□□ 0.27
UBE2D3-216ENST00000503742 ZNF329Q86UD4 541 aa16.75■□□□□ 0.27
UBE2D3-216ENST00000503742 SFRP2Q96HF1 295 aa16.75■□□□□ 0.27
UBE2D3-216ENST00000503742 SLC25A39Q9BZJ4 359 aaPredicted RBP16.75■□□□□ 0.27
UBE2D3-216ENST00000503742 S4R3C0 116 aa16.75■□□□□ 0.27
UBE2D3-216ENST00000503742 K7EN84 100 aa16.74■□□□□ 0.27
UBE2D3-216ENST00000503742 PPP1R2P9O14990 202 aa16.74■□□□□ 0.27
UBE2D3-216ENST00000503742 ATP6V0E1O15342 81 aa16.74■□□□□ 0.27
UBE2D3-216ENST00000503742 ZNF491Q8N8L2 437 aa16.74■□□□□ 0.27
UBE2D3-216ENST00000503742 NECAP1Q8NC96 275 aa16.74■□□□□ 0.27
UBE2D3-216ENST00000503742 C21orf62Q9NYP8 219 aa16.74■□□□□ 0.27
UBE2D3-216ENST00000503742 GNG7O60262 68 aa16.73■□□□□ 0.27
UBE2D3-216ENST00000503742 OR2J3O76001 311 aa16.73■□□□□ 0.27
UBE2D3-216ENST00000503742 SRP14P37108 136 aaKnown RBP16.73■□□□□ 0.27
UBE2D3-216ENST00000503742 TEX38Q6PEX7 206 aa16.73■□□□□ 0.27
UBE2D3-216ENST00000503742 LURAP1LQ8IV03 231 aa16.73■□□□□ 0.27
UBE2D3-216ENST00000503742 HIF1ANQ9NWT6 349 aa16.73■□□□□ 0.27
UBE2D3-216ENST00000503742 CELSR2Q9HCU4 2923 aa16.73■□□□□ 0.27
UBE2D3-216ENST00000503742 WI2-2373I1.2A0A1W2PRP0 233 aa16.73■□□□□ 0.27
UBE2D3-216ENST00000503742 LINC00587B1AMM8 73 aa16.73■□□□□ 0.27
UBE2D3-216ENST00000503742 NBEAP1P0C6P0 100 aa16.73■□□□□ 0.27
UBE2D3-216ENST00000503742 HIST1H1BP16401 226 aaKnown RBP16.73■□□□□ 0.27
UBE2D3-216ENST00000503742 CENPWQ5EE01 88 aa16.73■□□□□ 0.27
UBE2D3-216ENST00000503742 LEMD1Q68G75 181 aa16.73■□□□□ 0.27
UBE2D3-216ENST00000503742 UNQ5815/PRO19632Q6UWF5 114 aa16.73■□□□□ 0.27
UBE2D3-216ENST00000503742 TMEM14CQ9P0S9 112 aa16.73■□□□□ 0.27
UBE2D3-216ENST00000503742 MOB4Q9Y3A3 225 aa16.73■□□□□ 0.27
UBE2D3-216ENST00000503742 TRAV20A0A0B4J274 112 aa16.72■□□□□ 0.27
UBE2D3-216ENST00000503742 MDFIC2A0A1B0GVS7 189 aa16.72■□□□□ 0.27
UBE2D3-216ENST00000503742 FCGR2BP31994 310 aaPredicted RBP16.72■□□□□ 0.27
UBE2D3-216ENST00000503742 TMEM68Q96MH6 324 aa16.72■□□□□ 0.27
UBE2D3-216ENST00000503742 TMUB1Q9BVT8 246 aa16.72■□□□□ 0.27
UBE2D3-216ENST00000503742 LINC01548A6NM66 108 aa16.71■□□□□ 0.27
UBE2D3-216ENST00000503742 HNF1AP20823 631 aa16.71■□□□□ 0.27
UBE2D3-216ENST00000503742 GATA3P23771 443 aa16.71■□□□□ 0.27
UBE2D3-216ENST00000503742 GNG4P50150 75 aa16.71■□□□□ 0.27
UBE2D3-216ENST00000503742 TMEM219Q86XT9 240 aa16.71■□□□□ 0.27
UBE2D3-216ENST00000503742 RNF125Q96EQ8 232 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms