RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 MOB3BQ86TA1 216 aa5.32□□□□□ -1.56
CLCN3-203ENST00000502998 DEFB106AQ8N104 65 aa5.32□□□□□ -1.56
CLCN3-203ENST00000502998 C11orf44Q8N8P7 122 aa5.32□□□□□ -1.56
CLCN3-203ENST00000502998 TEX45Q8NA69 505 aa5.32□□□□□ -1.56
CLCN3-203ENST00000502998 RPS4Y2Q8TD47 263 aa5.32□□□□□ -1.56
CLCN3-203ENST00000502998 IGFBPL1Q8WX77 278 aa5.32□□□□□ -1.56
CLCN3-203ENST00000502998 DPH3Q96FX2 82 aa5.32□□□□□ -1.56
CLCN3-203ENST00000502998 BMFQ96LC9 184 aa5.32□□□□□ -1.56
CLCN3-203ENST00000502998 TMEM204Q9BSN7 226 aa5.32□□□□□ -1.56
CLCN3-203ENST00000502998 TMEM147Q9BVK8 224 aa5.32□□□□□ -1.56
CLCN3-203ENST00000502998 TMED7Q9Y3B3 224 aa5.32□□□□□ -1.56
CLCN3-203ENST00000502998 USP9YO00507 2555 aaPredicted RBP5.31□□□□□ -1.56
CLCN3-203ENST00000502998 MDFIC2A0A1B0GVS7 189 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 CEBPZOSA8MTT3 80 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 TMEM178BH3BS89 294 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 M0QYG6 137 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 NKX2-2O95096 273 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 HLA-DQA1P01909 254 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 PSMB8P28062 276 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 PFN2P35080 140 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 RPL13AP40429 203 aaKnown RBP5.31□□□□□ -1.56
CLCN3-203ENST00000502998 FHL3Q13643 280 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 RNPS1Q15287 305 aaKnown RBP5.31□□□□□ -1.56
CLCN3-203ENST00000502998 ZNF672Q499Z4 452 aaPredicted RBP5.31□□□□□ -1.56
CLCN3-203ENST00000502998 DMRTC1Q5HYR2 192 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 FAM166AQ6J272 317 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 MFSD12Q6NUT3 480 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 ACP7Q6ZNF0 438 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 PRSS41Q7RTY9 318 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 HSD11B1LQ7Z5J1 315 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 ZNF645Q8N7E2 425 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 IL17DQ8TAD2 202 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 RNF128Q8TEB7 428 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 ABHD14BQ96IU4 210 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 CCDC140Q96MF4 163 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 GFI1Q99684 422 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 VKORC1Q9BQB6 163 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 IL36BQ9NZH7 164 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 HIGD1BQ9P298 99 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 PYGO1Q9Y3Y4 419 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 BOD1L1Q8NFC6 3051 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 DOPEY1Q5JWR5 2465 aa5.31□□□□□ -1.56
CLCN3-203ENST00000502998 CPAMD8Q8IZJ3 1885 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 FAM236AA0A1B0GUQ0 79 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 FAM236BA0A1B0GV22 79 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 ZFP92A6NM28 416 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 LY6LH3BQJ8 138 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 J3QLW9 94 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 CLDN14O95500 239 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 CPSF4O95639 269 aaKnown RBP5.3□□□□□ -1.56
CLCN3-203ENST00000502998 TRACP01848 142 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 RBP4P02753 201 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 PLA2G2AP14555 144 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 IGFBP3P17936 291 aaPredicted RBP5.3□□□□□ -1.56
CLCN3-203ENST00000502998 AMY2BP19961 511 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 FOXA3P55318 350 aaPredicted RBP5.3□□□□□ -1.56
CLCN3-203ENST00000502998 DLX1P56177 255 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 RPS11P62280 158 aaKnown RBP eCLIP5.3□□□□□ -1.56
CLCN3-203ENST00000502998 PMAIP1Q13794 54 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 KLF5Q13887 457 aaPredicted RBP5.3□□□□□ -1.56
CLCN3-203ENST00000502998 PHLDA2Q53GA4 152 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 CFAP126Q5VTH2 177 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 EBLN2Q6P2I7 272 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 FBXL14Q8N1E6 418 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 EXOC3-AS1Q8N2X6 119 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 ANKRD29Q8N6D5 301 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 TMEM99Q8N816 258 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 WDR31Q8NA23 367 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 ZNF721Q8TF20 911 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 TMEM59Q9BXS4 323 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 RELNP78509 3460 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 NBPF19A0A087WUL8 3843 aa5.3□□□□□ -1.56
CLCN3-203ENST00000502998 TRAV4A0A0B4J268 109 aa5.29□□□□□ -1.56
CLCN3-203ENST00000502998 TRBV7-7A0A0K0K1E9 115 aa5.29□□□□□ -1.56
CLCN3-203ENST00000502998 C1orf226A1L170 272 aa5.29□□□□□ -1.56
CLCN3-203ENST00000502998 SNURFLB1AK76 121 aa5.29□□□□□ -1.56
CLCN3-203ENST00000502998 IGLL5B9A064 214 aa5.29□□□□□ -1.56
CLCN3-203ENST00000502998 LMX1BO60663 402 aa5.29□□□□□ -1.56
CLCN3-203ENST00000502998 PGLYRP1O75594 196 aaPredicted RBP5.29□□□□□ -1.56
CLCN3-203ENST00000502998 FGF1P05230 155 aa5.29□□□□□ -1.56
CLCN3-203ENST00000502998 EBI3Q14213 229 aa5.29□□□□□ -1.56
CLCN3-203ENST00000502998 ASPHD1Q5U4P2 390 aa5.29□□□□□ -1.56
CLCN3-203ENST00000502998 PCSK4Q6UW60 755 aa5.29□□□□□ -1.56
CLCN3-203ENST00000502998 SBSPONQ8IVN8 264 aa5.29□□□□□ -1.56
CLCN3-203ENST00000502998 NUP35Q8NFH5 326 aa5.29□□□□□ -1.56
CLCN3-203ENST00000502998 AJUBAQ96IF1 538 aa5.29□□□□□ -1.56
CLCN3-203ENST00000502998 MRPL20Q9BYC9 149 aaKnown RBP5.29□□□□□ -1.56
CLCN3-203ENST00000502998 SPRY4Q9C004 299 aa5.29□□□□□ -1.56
CLCN3-203ENST00000502998 LAMTOR3Q9UHA4 124 aa5.29□□□□□ -1.56
CLCN3-203ENST00000502998 ANKRD17O75179 2603 aaKnown RBP5.29□□□□□ -1.56
CLCN3-203ENST00000502998 COL5A1P20908 1838 aaPredicted RBP5.29□□□□□ -1.56
CLCN3-203ENST00000502998 RP1L1Q8IWN7 2480 aaPredicted RBP5.29□□□□□ -1.56
CLCN3-203ENST00000502998 IGHV1-24A0A0C4DH33 117 aa5.28□□□□□ -1.56
CLCN3-203ENST00000502998 A0A0D9SEW6 157 aa5.28□□□□□ -1.56
CLCN3-203ENST00000502998 A0A1B0GTL3 188 aa5.28□□□□□ -1.56
CLCN3-203ENST00000502998 TEX50A0A1B0GTY4 177 aa5.28□□□□□ -1.56
CLCN3-203ENST00000502998 hDV102S1A0JD36 115 aa5.28□□□□□ -1.56
CLCN3-203ENST00000502998 PRSS38A1L453 326 aa5.28□□□□□ -1.56
CLCN3-203ENST00000502998 LILRA5A6NI73 299 aa5.28□□□□□ -1.56
CLCN3-203ENST00000502998 A8MWL6 223 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms