RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 IL36BQ9NZH7 164 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 IGHV2-26A0A0B4J1V2 119 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 C7orf71A4D174 169 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 LOXP28300 417 aaPredicted RBP6.02□□□□□ -1.45
PDGFC-203ENST00000502773 BRWD1-AS2P59051 145 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 HSD52Q0P140 79 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 ZNF841Q6ZN19 808 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 VKORC1L1Q8N0U8 176 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 Q8NA96 180 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 TMEM170AQ8WVE7 144 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 RASL11BQ9BPW5 248 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 HIGD1AQ9Y241 93 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 TSSC4Q9Y5U2 329 aaPredicted RBP6.02□□□□□ -1.45
PDGFC-203ENST00000502773 FOXH1O75593 365 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 FAM87AP0C7U9 286 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 FAM106CPP0CH98 169 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 PVRIGQ6DKI7 326 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 PPP1R27Q86WC6 154 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 RPRMLQ8N4K4 120 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 TEX29Q8N6K0 151 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 CYYR1Q96J86 154 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 BUB1B-PAK6H3BSN5 160 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 H3BVH4 76 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 WISP2O76076 250 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 MOSP00540 346 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 HLA-DQA1P01909 254 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 IGFBP2P18065 325 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 TCL1AP56279 114 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 ODF1Q14990 250 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 ANXA2RQ3ZCQ2 193 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 LYRM7Q5U5X0 104 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 LEAP2Q969E1 77 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 MRAP2Q96G30 205 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 SSBP3Q9BWW4 388 aaPredicted RBP6.01□□□□□ -1.45
PDGFC-203ENST00000502773 A0A1B0GWB2 263 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 IGHV3-7P01780 117 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 PFN1P07737 140 aaKnown RBP6.01□□□□□ -1.45
PDGFC-203ENST00000502773 SLC35B1P78383 322 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 MSMPQ1L6U9 139 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 LINC01551Q86U37 167 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 LYPD1Q8N2G4 141 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 SLC25A33Q9BSK2 321 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 NRN1Q9NPD7 142 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 HILPDAQ9Y5L2 63 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 FAM186AA6NE01 2351 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 SERF1AO75920 110 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 CCL3L1P16619 93 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 ZCCHC24Q8N2G6 241 aaKnown RBP6.01□□□□□ -1.45
PDGFC-203ENST00000502773 OR10AG1Q8NH19 301 aa6.01□□□□□ -1.45
PDGFC-203ENST00000502773 COL25A1Q9BXS0 654 aaPredicted RBP6.01□□□□□ -1.45
PDGFC-203ENST00000502773 PRSS46E5RG02 174 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 K7EP13 123 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 TNFRSF13BO14836 293 aaPredicted RBP6□□□□□ -1.45
PDGFC-203ENST00000502773 SPINK8P0C7L1 97 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 PRTN3P24158 256 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 SHISA2Q6UWI4 295 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 FAM19A2Q8N3H0 131 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 C20orf144Q9BQM9 153 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 LAMA2P24043 3122 aaKnown RBP6□□□□□ -1.45
PDGFC-203ENST00000502773 IGHV1-3A0A0C4DH29 117 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 IGHV2-70DA0A0C4DH43 119 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 PROP1O75360 226 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 CBLN1P23435 193 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 TSPOP30536 169 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 MFAP4P55083 255 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 GTF3C1Q12789 2109 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 C5orf17Q8NAS9 161 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 AAMDCQ9H7C9 122 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 HES1Q14469 280 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 MRPL54Q6P161 138 aaKnown RBP6□□□□□ -1.45
PDGFC-203ENST00000502773 OR2T6Q8NHC8 308 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 NPIPB3Q92617 1050 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 FMC1Q96HJ9 113 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 SIGLEC9Q9Y336 463 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 CACNA1HO95180 2353 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 OTOGLQ3ZCN5 2332 aa6□□□□□ -1.45
PDGFC-203ENST00000502773 TRAV3A0A0B4J244 114 aa5.99□□□□□ -1.45
PDGFC-203ENST00000502773 NBR2O15453 112 aa5.99□□□□□ -1.45
PDGFC-203ENST00000502773 IGKV1D-33P01593 117 aa5.99□□□□□ -1.45
PDGFC-203ENST00000502773 IGKV1-33P01594 117 aa5.99□□□□□ -1.45
PDGFC-203ENST00000502773 GCSHP23434 173 aa5.99□□□□□ -1.45
PDGFC-203ENST00000502773 TM4SF20Q53R12 229 aa5.99□□□□□ -1.45
PDGFC-203ENST00000502773 OR11H6Q8NGC7 330 aa5.99□□□□□ -1.45
PDGFC-203ENST00000502773 LINC01560Q8TB33 94 aa5.99□□□□□ -1.45
PDGFC-203ENST00000502773 F11RQ9Y624 299 aaKnown RBP5.99□□□□□ -1.45
PDGFC-203ENST00000502773 A0A1B0GUS0 222 aa5.99□□□□□ -1.45
PDGFC-203ENST00000502773 A6NJY4 79 aa5.99□□□□□ -1.45
PDGFC-203ENST00000502773 A8MWL6 223 aa5.99□□□□□ -1.45
PDGFC-203ENST00000502773 SLC25A5P05141 298 aaKnown RBP5.99□□□□□ -1.45
PDGFC-203ENST00000502773 SCGB1C2P0DMR2 95 aa5.99□□□□□ -1.45
PDGFC-203ENST00000502773 GNB1P62873 340 aa5.99□□□□□ -1.45
PDGFC-203ENST00000502773 PSG9Q00887 426 aa5.99□□□□□ -1.45
PDGFC-203ENST00000502773 COA6Q5JTJ3 125 aaKnown RBP5.99□□□□□ -1.45
PDGFC-203ENST00000502773 TMEM116Q8NCL8 245 aa5.99□□□□□ -1.45
PDGFC-203ENST00000502773 EAF1Q96JC9 268 aaPredicted RBP5.99□□□□□ -1.45
PDGFC-203ENST00000502773 GNB1LQ9BYB4 327 aa5.99□□□□□ -1.45
PDGFC-203ENST00000502773 TFF1P04155 84 aa5.99□□□□□ -1.45
PDGFC-203ENST00000502773 OR5AL1P0C617 328 aa5.99□□□□□ -1.45
PDGFC-203ENST00000502773 CT45A10P0DMU9 189 aa5.99□□□□□ -1.45
PDGFC-203ENST00000502773 GPR82Q96P67 336 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms