RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 ENKURQ8TC29 256 aa11.51□□□□□ -0.57
MUC1-220ENST00000498431 RAB40CQ96S21 281 aa11.51□□□□□ -0.57
MUC1-220ENST00000498431 IGLV2-18A0A075B6J9 118 aa11.5□□□□□ -0.57
MUC1-220ENST00000498431 A0A0B4J293 547 aa11.5□□□□□ -0.57
MUC1-220ENST00000498431 C3orf85A0A1B0GTC6 90 aa11.5□□□□□ -0.57
MUC1-220ENST00000498431 CLN5O75503 358 aa11.5□□□□□ -0.57
MUC1-220ENST00000498431 B3GALNT1O75752 331 aa11.5□□□□□ -0.57
MUC1-220ENST00000498431 IGKV1-17P01599 117 aa11.5□□□□□ -0.57
MUC1-220ENST00000498431 IGKV1-5P01602 117 aa11.5□□□□□ -0.57
MUC1-220ENST00000498431 TCRBP04435 133 aa11.5□□□□□ -0.57
MUC1-220ENST00000498431 P0C879 139 aa11.5□□□□□ -0.57
MUC1-220ENST00000498431 PSMG4Q5JS54 123 aa11.5□□□□□ -0.57
MUC1-220ENST00000498431 SLC35G3Q8N808 338 aa11.5□□□□□ -0.57
MUC1-220ENST00000498431 NAA60Q9H7X0 242 aa11.5□□□□□ -0.57
MUC1-220ENST00000498431 XCL2Q9UBD3 114 aa11.5□□□□□ -0.57
MUC1-220ENST00000498431 KCNIP3Q9Y2W7 256 aa11.5□□□□□ -0.57
MUC1-220ENST00000498431 LRP1BQ9NZR2 4599 aa11.49□□□□□ -0.57
MUC1-220ENST00000498431 CRYM-AS1A6NIL9 109 aa11.49□□□□□ -0.57
MUC1-220ENST00000498431 INS-IGF2F8WCM5 200 aa11.49□□□□□ -0.57
MUC1-220ENST00000498431 AKR1C4P17516 323 aa11.49□□□□□ -0.57
MUC1-220ENST00000498431 DHRS2Q13268 280 aa11.49□□□□□ -0.57
MUC1-220ENST00000498431 TIGITQ495A1 244 aa11.49□□□□□ -0.57
MUC1-220ENST00000498431 Q6ZR54 194 aa11.49□□□□□ -0.57
MUC1-220ENST00000498431 TMEM230Q96A57 120 aa11.49□□□□□ -0.57
MUC1-220ENST00000498431 FLVCR2Q9UPI3 526 aa11.49□□□□□ -0.57
MUC1-220ENST00000498431 U3KQE9 123 aa11.49□□□□□ -0.57
MUC1-220ENST00000498431 HELTA6NFD8 242 aa11.48□□□□□ -0.57
MUC1-220ENST00000498431 IFNA17P01571 189 aa11.48□□□□□ -0.57
MUC1-220ENST00000498431 UBE2MP61081 183 aaKnown RBP11.48□□□□□ -0.57
MUC1-220ENST00000498431 TMEM128Q5BJH2 165 aa11.48□□□□□ -0.57
MUC1-220ENST00000498431 NRARPQ7Z6K4 114 aa11.48□□□□□ -0.57
MUC1-220ENST00000498431 OR4X1Q8NH49 305 aa11.48□□□□□ -0.57
MUC1-220ENST00000498431 GLMPQ8WWB7 406 aa11.48□□□□□ -0.57
MUC1-220ENST00000498431 TP53RKQ96S44 253 aa11.48□□□□□ -0.57
MUC1-220ENST00000498431 C20orf85Q9H1P6 137 aa11.48□□□□□ -0.57
MUC1-220ENST00000498431 H2AFB2P0C5Z0 115 aa11.47□□□□□ -0.57
MUC1-220ENST00000498431 OR5AC1P0C628 307 aa11.47□□□□□ -0.57
MUC1-220ENST00000498431 OPRK1P41145 380 aa11.47□□□□□ -0.57
MUC1-220ENST00000498431 DHODHQ02127 395 aa11.47□□□□□ -0.57
MUC1-220ENST00000498431 SP6Q3SY56 376 aa11.47□□□□□ -0.57
MUC1-220ENST00000498431 C16orf54Q6UWD8 224 aa11.47□□□□□ -0.57
MUC1-220ENST00000498431 NUDT15Q9NV35 164 aa11.47□□□□□ -0.57
MUC1-220ENST00000498431 TRAV6A0A075B6T7 132 aa11.46□□□□□ -0.57
MUC1-220ENST00000498431 A0A0G2JRQ6 117 aa11.46□□□□□ -0.57
MUC1-220ENST00000498431 H3BMM0 161 aa11.46□□□□□ -0.57
MUC1-220ENST00000498431 CORTO00230 105 aa11.46□□□□□ -0.57
MUC1-220ENST00000498431 IFNA10P01566 189 aa11.46□□□□□ -0.57
MUC1-220ENST00000498431 ANXA3P12429 323 aa11.46□□□□□ -0.57
MUC1-220ENST00000498431 VAMP1P23763 118 aa11.46□□□□□ -0.57
MUC1-220ENST00000498431 UCP1P25874 307 aa11.46□□□□□ -0.57
MUC1-220ENST00000498431 NPY1RP25929 384 aa11.46□□□□□ -0.57
MUC1-220ENST00000498431 HOXA1P49639 335 aaPredicted RBP11.46□□□□□ -0.57
MUC1-220ENST00000498431 SUB1P53999 127 aaKnown RBP eCLIP11.46□□□□□ -0.57
MUC1-220ENST00000498431 TRIM16LQ309B1 348 aa11.46□□□□□ -0.57
MUC1-220ENST00000498431 Q6ZRM9 215 aa11.46□□□□□ -0.57
MUC1-220ENST00000498431 NARS2Q96I59 477 aaKnown RBP11.46□□□□□ -0.57
MUC1-220ENST00000498431 NACAE9PAV3 2078 aa11.45□□□□□ -0.58
MUC1-220ENST00000498431 FAM90A26D6RGX4 464 aa11.45□□□□□ -0.58
MUC1-220ENST00000498431 ATG12O94817 140 aa11.45□□□□□ -0.58
MUC1-220ENST00000498431 SFT2D2O95562 160 aa11.45□□□□□ -0.58
MUC1-220ENST00000498431 PTTG1O95997 202 aa11.45□□□□□ -0.58
MUC1-220ENST00000498431 ANXA7P20073 488 aaKnown RBP11.45□□□□□ -0.58
MUC1-220ENST00000498431 AKR1C2P52895 323 aa11.45□□□□□ -0.58
MUC1-220ENST00000498431 EMP1P54849 157 aa11.45□□□□□ -0.58
MUC1-220ENST00000498431 SUPT4H1P63272 117 aaKnown RBP11.45□□□□□ -0.58
MUC1-220ENST00000498431 BSXQ3C1V8 233 aa11.45□□□□□ -0.58
MUC1-220ENST00000498431 ZNF705AQ6ZN79 300 aaPredicted RBP11.45□□□□□ -0.58
MUC1-220ENST00000498431 UBE2DNLQ8IWF7 75 aa11.45□□□□□ -0.58
MUC1-220ENST00000498431 GLYATL2Q8WU03 294 aa11.45□□□□□ -0.58
MUC1-220ENST00000498431 C1QTNF4Q9BXJ3 329 aa11.45□□□□□ -0.58
MUC1-220ENST00000498431 TMEM222Q9H0R3 208 aa11.45□□□□□ -0.58
MUC1-220ENST00000498431 PLA2G2EQ9NZK7 142 aa11.45□□□□□ -0.58
MUC1-220ENST00000498431 ZNF705FA8MVS1 300 aaPredicted RBP11.44□□□□□ -0.58
MUC1-220ENST00000498431 HNRNPCP07910 306 aaKnown RBP eCLIP11.44□□□□□ -0.58
MUC1-220ENST00000498431 OR4E1P0C645 316 aa11.44□□□□□ -0.58
MUC1-220ENST00000498431 IGLC1P0CG04 106 aa11.44□□□□□ -0.58
MUC1-220ENST00000498431 ZNF705DP0CH99 300 aaPredicted RBP11.44□□□□□ -0.58
MUC1-220ENST00000498431 ZNF705BP0CI00 300 aaPredicted RBP11.44□□□□□ -0.58
MUC1-220ENST00000498431 DEFB1P60022 68 aa11.44□□□□□ -0.58
MUC1-220ENST00000498431 SRPXP78539 464 aa11.44□□□□□ -0.58
MUC1-220ENST00000498431 PPP1R1AQ13522 171 aa11.44□□□□□ -0.58
MUC1-220ENST00000498431 USF2Q15853 346 aaPredicted RBP11.44□□□□□ -0.58
MUC1-220ENST00000498431 RGS21Q2M5E4 152 aa11.44□□□□□ -0.58
MUC1-220ENST00000498431 C4orf46Q504U0 113 aa11.44□□□□□ -0.58
MUC1-220ENST00000498431 APOBP04114 4563 aaKnown RBP11.43□□□□□ -0.58
MUC1-220ENST00000498431 PIGBOS1A0A0B4J2F0 54 aa11.43□□□□□ -0.58
MUC1-220ENST00000498431 C9orf170A2RU37 121 aa11.43□□□□□ -0.58
MUC1-220ENST00000498431 INMT-MINDY4F8WBC2 141 aa11.43□□□□□ -0.58
MUC1-220ENST00000498431 CDS2O95674 445 aa11.43□□□□□ -0.58
MUC1-220ENST00000498431 IFNA21P01568 189 aa11.43□□□□□ -0.58
MUC1-220ENST00000498431 SPART-AS1P0CW21 52 aa11.43□□□□□ -0.58
MUC1-220ENST00000498431 EIF2B2P49770 351 aaKnown RBP11.43□□□□□ -0.58
MUC1-220ENST00000498431 FXYD7P58549 80 aa11.43□□□□□ -0.58
MUC1-220ENST00000498431 NUTF2P61970 127 aaKnown RBP11.43□□□□□ -0.58
MUC1-220ENST00000498431 GDF5OSQ5U4N7 250 aa11.43□□□□□ -0.58
MUC1-220ENST00000498431 PRSS54Q6PEW0 395 aa11.43□□□□□ -0.58
MUC1-220ENST00000498431 LGI3Q8N145 548 aa11.43□□□□□ -0.58
MUC1-220ENST00000498431 NEU1Q99519 415 aa11.43□□□□□ -0.58
MUC1-220ENST00000498431 PDCD10Q9BUL8 212 aa11.43□□□□□ -0.58
MUC1-220ENST00000498431 IGHV3OR16-12A0A075B7B8 117 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 175.3 ms