RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 C11orf71Q6IPW1 123 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 OR4A16Q8NH70 328 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 C8orf46Q8TAG6 207 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 FAM103A1Q9BTL3 118 aaKnown RBP9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 MDFIC2A0A1B0GVS7 189 aa9.36□□□□□ -0.91
SNRNP200-208ENST00000497539 PRSS46E5RG02 174 aa9.36□□□□□ -0.91
SNRNP200-208ENST00000497539 ARL14EPLP0DKL9 152 aa9.36□□□□□ -0.91
SNRNP200-208ENST00000497539 CD300EQ496F6 205 aaPredicted RBP9.36□□□□□ -0.91
SNRNP200-208ENST00000497539 VKORC1L1Q8N0U8 176 aa9.36□□□□□ -0.91
SNRNP200-208ENST00000497539 LEAP2Q969E1 77 aa9.36□□□□□ -0.91
SNRNP200-208ENST00000497539 DAZAP1Q96EP5 407 aaKnown RBP9.36□□□□□ -0.91
SNRNP200-208ENST00000497539 RRHO14718 337 aa9.36□□□□□ -0.91
SNRNP200-208ENST00000497539 ZNF90Q03938 601 aa9.36□□□□□ -0.91
SNRNP200-208ENST00000497539 RTL8BQ17RB0 113 aa9.36□□□□□ -0.91
SNRNP200-208ENST00000497539 DEFB125Q8N687 156 aa9.36□□□□□ -0.91
SNRNP200-208ENST00000497539 OR5AN1Q8NGI8 311 aa9.36□□□□□ -0.91
SNRNP200-208ENST00000497539 RNF114Q9Y508 228 aa9.36□□□□□ -0.91
SNRNP200-208ENST00000497539 DCHS1Q96JQ0 3298 aa9.36□□□□□ -0.91
SNRNP200-208ENST00000497539 PLCE1Q9P212 2302 aa9.35□□□□□ -0.91
SNRNP200-208ENST00000497539 PSG9Q00887 426 aa9.35□□□□□ -0.91
SNRNP200-208ENST00000497539 GAGE5Q13069 117 aa9.35□□□□□ -0.91
SNRNP200-208ENST00000497539 GAGE6Q13070 117 aa9.35□□□□□ -0.91
SNRNP200-208ENST00000497539 MIC13Q5XKP0 118 aa9.35□□□□□ -0.91
SNRNP200-208ENST00000497539 OSR1Q8TAX0 266 aaPredicted RBP9.35□□□□□ -0.91
SNRNP200-208ENST00000497539 SSMEM1Q8WWF3 244 aa9.35□□□□□ -0.91
SNRNP200-208ENST00000497539 ST6GALNAC6Q969X2 333 aa9.35□□□□□ -0.91
SNRNP200-208ENST00000497539 PRNDQ9UKY0 176 aa9.35□□□□□ -0.91
SNRNP200-208ENST00000497539 UFC1Q9Y3C8 167 aa9.35□□□□□ -0.91
SNRNP200-208ENST00000497539 OR2T8A6NH00 312 aa9.35□□□□□ -0.91
SNRNP200-208ENST00000497539 FNDC10F2Z333 226 aa9.35□□□□□ -0.91
SNRNP200-208ENST00000497539 C17orf112F2Z3M2 114 aa9.35□□□□□ -0.91
SNRNP200-208ENST00000497539 INS-IGF2F8WCM5 200 aa9.35□□□□□ -0.91
SNRNP200-208ENST00000497539 FOXL1Q12952 345 aa9.35□□□□□ -0.91
SNRNP200-208ENST00000497539 ZNF841Q6ZN19 808 aa9.35□□□□□ -0.91
SNRNP200-208ENST00000497539 SMIM20Q8N5G0 67 aa9.35□□□□□ -0.91
SNRNP200-208ENST00000497539 Q8N976 141 aa9.35□□□□□ -0.91
SNRNP200-208ENST00000497539 OR4F17Q8NGA8 305 aa9.35□□□□□ -0.91
SNRNP200-208ENST00000497539 SPATA25Q9BR10 227 aa9.35□□□□□ -0.91
SNRNP200-208ENST00000497539 UPK2O00526 184 aa9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 CRISP2P16562 243 aa9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 IER3P46695 156 aa9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 TPPP2P59282 170 aa9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 HSPE1P61604 102 aaKnown RBP9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 SLC35B1P78383 322 aa9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 DTX2Q86UW9 622 aa9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 BAGE3Q86Y29 109 aa9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 BAGE2Q86Y30 109 aa9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 OR10G8Q8NGN5 311 aa9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 OR4A5Q8NH83 315 aa9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 UHRF2Q96PU4 802 aa9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 MRPL18Q9H0U6 180 aaKnown RBP9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 TCF19Q9Y242 345 aa9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 TRAV34A0A0B4J273 112 aa9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 GAGE12HA6NDE8 117 aa9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 MPDU1O75352 247 aa9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 CCL3L1P16619 93 aa9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 GATA3P23771 443 aa9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 KIAA1644Q3SXP7 199 aa9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 SPATA31B1PQ5VZV4 182 aa9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 NEU4Q8WWR8 484 aaPredicted RBP9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 WDR83OSQ9Y284 106 aa9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 YTHDF2Q9Y5A9 579 aaKnown RBP9.34□□□□□ -0.91
SNRNP200-208ENST00000497539 TMEM189A5PLL7 270 aa9.33□□□□□ -0.92
SNRNP200-208ENST00000497539 H0YJW9 148 aa9.33□□□□□ -0.92
SNRNP200-208ENST00000497539 K7EN84 100 aa9.33□□□□□ -0.92
SNRNP200-208ENST00000497539 FOXH1O75593 365 aa9.33□□□□□ -0.92
SNRNP200-208ENST00000497539 CD99P14209 185 aa9.33□□□□□ -0.92
SNRNP200-208ENST00000497539 PDPNQ86YL7 162 aa9.33□□□□□ -0.92
SNRNP200-208ENST00000497539 ABHD12Q8N2K0 398 aa9.33□□□□□ -0.92
SNRNP200-208ENST00000497539 OR9G1Q8NH87 305 aa9.33□□□□□ -0.92
SNRNP200-208ENST00000497539 SAMD10Q9BYL1 202 aa9.33□□□□□ -0.92
SNRNP200-208ENST00000497539 KCNIP2Q9NS61 270 aa9.33□□□□□ -0.92
SNRNP200-208ENST00000497539 RALYQ9UKM9 306 aaKnown RBP9.33□□□□□ -0.92
SNRNP200-208ENST00000497539 CEP295Q9C0D2 2601 aa9.33□□□□□ -0.92
SNRNP200-208ENST00000497539 ARFGEF3Q5TH69 2177 aa9.33□□□□□ -0.92
SNRNP200-208ENST00000497539 M0QXV9 152 aa9.33□□□□□ -0.92
SNRNP200-208ENST00000497539 FCN1O00602 326 aa9.33□□□□□ -0.92
SNRNP200-208ENST00000497539 IGHV1-8P0DP01 117 aa9.33□□□□□ -0.92
SNRNP200-208ENST00000497539 KRTDAPP60985 99 aa9.33□□□□□ -0.92
SNRNP200-208ENST00000497539 ASPHD1Q5U4P2 390 aa9.33□□□□□ -0.92
SNRNP200-208ENST00000497539 MRPL16Q9NX20 251 aaKnown RBP9.33□□□□□ -0.92
SNRNP200-208ENST00000497539 THYN1Q9P016 225 aa9.33□□□□□ -0.92
SNRNP200-208ENST00000497539 TRAV3A0A0B4J244 114 aa9.32□□□□□ -0.92
SNRNP200-208ENST00000497539 APOA2P02652 100 aa9.32□□□□□ -0.92
SNRNP200-208ENST00000497539 PRCDQ00LT1 54 aa9.32□□□□□ -0.92
SNRNP200-208ENST00000497539 TREML4Q6UXN2 200 aa9.32□□□□□ -0.92
SNRNP200-208ENST00000497539 LY6G5BQ8NDX9 201 aa9.32□□□□□ -0.92
SNRNP200-208ENST00000497539 POLEQ07864 2286 aa9.32□□□□□ -0.92
SNRNP200-208ENST00000497539 YPEL3P61236 119 aaPredicted RBP9.32□□□□□ -0.92
SNRNP200-208ENST00000497539 OR5AU1Q8NGC0 362 aa9.32□□□□□ -0.92
SNRNP200-208ENST00000497539 H1FXQ92522 213 aaKnown RBP9.32□□□□□ -0.92
SNRNP200-208ENST00000497539 GPR82Q96P67 336 aa9.32□□□□□ -0.92
SNRNP200-208ENST00000497539 MGST2Q99735 147 aa9.32□□□□□ -0.92
SNRNP200-208ENST00000497539 NABP2Q9BQ15 211 aa9.32□□□□□ -0.92
SNRNP200-208ENST00000497539 MRPL20Q9BYC9 149 aaKnown RBP9.32□□□□□ -0.92
SNRNP200-208ENST00000497539 TMEM133Q9H2Q1 129 aa9.32□□□□□ -0.92
SNRNP200-208ENST00000497539 HEYLQ9NQ87 328 aaPredicted RBP9.32□□□□□ -0.92
SNRNP200-208ENST00000497539 LY6DQ14210 128 aa9.31□□□□□ -0.92
SNRNP200-208ENST00000497539 GTF2H5Q6ZYL4 71 aa9.31□□□□□ -0.92
SNRNP200-208ENST00000497539 FBXL7Q9UJT9 491 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms