RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 C9orf152Q5JTZ5 239 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 DTX2Q86UW9 622 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 NHLRC2Q8NBF2 726 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 NPBQ8NG41 125 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 CMTM2Q8TAZ6 248 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 LINC00479Q96M42 142 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 NAT8BQ9UHF3 227 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 EPDR1Q9UM22 224 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 IGF2RP11717 2491 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 GRIFINA4D1Z8 144 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 ODF3BA8MYP8 253 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 NDUFA3O95167 84 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 PSG1P11464 419 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 LYZP61626 148 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 IQCJQ1A5X6 159 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 FAM209BQ5JX69 171 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 LDLRAD2Q5SZI1 272 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 CCDC144NLQ6NUI1 221 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 C1orf122Q6ZSJ8 110 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 TMEM256Q8N2U0 113 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 CFHR4Q92496 578 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 GATCO43716 136 aaKnown RBP8.8□□□□□ -1
CMSS1-208ENST00000496116 AMY1AP04745 511 aa8.8□□□□□ -1
CMSS1-208ENST00000496116 GP9P14770 177 aa8.8□□□□□ -1
CMSS1-208ENST00000496116 DEFA6Q01524 100 aa8.8□□□□□ -1
CMSS1-208ENST00000496116 HES1Q14469 280 aa8.8□□□□□ -1
CMSS1-208ENST00000496116 C5orf17Q8NAS9 161 aa8.8□□□□□ -1
CMSS1-208ENST00000496116 ATG101Q9BSB4 218 aa8.8□□□□□ -1
CMSS1-208ENST00000496116 TRAV34A0A0B4J273 112 aa8.8□□□□□ -1
CMSS1-208ENST00000496116 IZUMO1RA6ND01 250 aa8.8□□□□□ -1
CMSS1-208ENST00000496116 SPINK4O60575 86 aa8.8□□□□□ -1
CMSS1-208ENST00000496116 HLA-DQA1P01909 254 aa8.8□□□□□ -1
CMSS1-208ENST00000496116 SNRPCP09234 159 aaKnown RBP8.8□□□□□ -1
CMSS1-208ENST00000496116 HIST1H1EP10412 219 aaKnown RBP8.8□□□□□ -1
CMSS1-208ENST00000496116 TCL1AP56279 114 aa8.8□□□□□ -1
CMSS1-208ENST00000496116 GNG5P63218 68 aa8.8□□□□□ -1
CMSS1-208ENST00000496116 PAFAH1B2P68402 229 aa8.8□□□□□ -1
CMSS1-208ENST00000496116 KLRD1Q13241 179 aa8.8□□□□□ -1
CMSS1-208ENST00000496116 LHFPL4Q7Z7J7 247 aa8.8□□□□□ -1
CMSS1-208ENST00000496116 KIR3DL3Q8N743 410 aa8.8□□□□□ -1
CMSS1-208ENST00000496116 GRAMD2BQ96HH9 432 aa8.8□□□□□ -1
CMSS1-208ENST00000496116 FMC1Q96HJ9 113 aa8.8□□□□□ -1
CMSS1-208ENST00000496116 GSX1Q9H4S2 264 aaPredicted RBP8.8□□□□□ -1
CMSS1-208ENST00000496116 OOSP1A8MZH6 123 aa8.79□□□□□ -1
CMSS1-208ENST00000496116 ESDP10768 282 aa8.79□□□□□ -1
CMSS1-208ENST00000496116 TPPP2P59282 170 aa8.79□□□□□ -1
CMSS1-208ENST00000496116 RAB4BP61018 213 aa8.79□□□□□ -1
CMSS1-208ENST00000496116 SLC35B1P78383 322 aa8.79□□□□□ -1
CMSS1-208ENST00000496116 Q0VG73 95 aa8.79□□□□□ -1
CMSS1-208ENST00000496116 USF2Q15853 346 aaPredicted RBP8.79□□□□□ -1
CMSS1-208ENST00000496116 RASL11AQ6T310 242 aa8.79□□□□□ -1
CMSS1-208ENST00000496116 BAGE3Q86Y29 109 aa8.79□□□□□ -1
CMSS1-208ENST00000496116 TMEM190Q8WZ59 177 aa8.79□□□□□ -1
CMSS1-208ENST00000496116 GPR82Q96P67 336 aa8.79□□□□□ -1
CMSS1-208ENST00000496116 SLC25A39Q9BZJ4 359 aaPredicted RBP8.79□□□□□ -1
CMSS1-208ENST00000496116 Q9H3A6 140 aa8.79□□□□□ -1
CMSS1-208ENST00000496116 ZNF331Q9NQX6 463 aaPredicted RBP8.79□□□□□ -1
CMSS1-208ENST00000496116 TMEM14CQ9P0S9 112 aa8.79□□□□□ -1
CMSS1-208ENST00000496116 KLF12Q9Y4X4 402 aa8.79□□□□□ -1
CMSS1-208ENST00000496116 A0A1B0GUS0 222 aa8.78□□□□□ -1
CMSS1-208ENST00000496116 K7EIM0 57 aa8.78□□□□□ -1
CMSS1-208ENST00000496116 C5orf64Q2M2E5 130 aa8.78□□□□□ -1
CMSS1-208ENST00000496116 PRR27Q6MZM9 219 aa8.78□□□□□ -1
CMSS1-208ENST00000496116 ZNF600Q6ZNG1 722 aa8.78□□□□□ -1
CMSS1-208ENST00000496116 TMEM136Q6ZRR5 245 aa8.78□□□□□ -1
CMSS1-208ENST00000496116 NUDT10Q8NFP7 164 aa8.78□□□□□ -1
CMSS1-208ENST00000496116 NUDT11Q96G61 164 aa8.78□□□□□ -1
CMSS1-208ENST00000496116 RPH3ALQ9UNE2 315 aa8.78□□□□□ -1
CMSS1-208ENST00000496116 RNF24Q9Y225 148 aa8.78□□□□□ -1
CMSS1-208ENST00000496116 FRMD6-AS1P0C7T7 363 aa8.78□□□□□ -1
CMSS1-208ENST00000496116 DDTP30046 118 aa8.78□□□□□ -1
CMSS1-208ENST00000496116 OR10J3Q5JRS4 329 aa8.78□□□□□ -1
CMSS1-208ENST00000496116 MINOS1Q5TGZ0 78 aa8.78□□□□□ -1
CMSS1-208ENST00000496116 LEMD1Q68G75 181 aa8.78□□□□□ -1
CMSS1-208ENST00000496116 MRPL54Q6P161 138 aaKnown RBP8.78□□□□□ -1
CMSS1-208ENST00000496116 VMO1Q7Z5L0 202 aa8.78□□□□□ -1
CMSS1-208ENST00000496116 S100A7AQ86SG5 101 aa8.78□□□□□ -1
CMSS1-208ENST00000496116 TMEM68Q96MH6 324 aa8.78□□□□□ -1
CMSS1-208ENST00000496116 MS4A10Q96PG2 267 aa8.78□□□□□ -1
CMSS1-208ENST00000496116 RBM14Q96PK6 669 aaKnown RBP8.78□□□□□ -1
CMSS1-208ENST00000496116 MINOS1-NBL1R4GNA1 71 aa8.78□□□□□ -1
CMSS1-208ENST00000496116 TRAV30A0A087WSZ9 112 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 NUPR1O60356 82 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 TOMM40O96008 361 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 CA1P00915 261 aaPredicted RBP8.77□□□□□ -1.01
CMSS1-208ENST00000496116 IGKV1-17P01599 117 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 TCRAP04437 139 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 LY6DQ14210 128 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 LURAP1LQ8IV03 231 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 MBD6Q96DN6 1003 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 NOL4LQ96MY1 436 aaPredicted RBP8.77□□□□□ -1.01
CMSS1-208ENST00000496116 FAM103A1Q9BTL3 118 aaKnown RBP8.77□□□□□ -1.01
CMSS1-208ENST00000496116 OTORQ9NRC9 128 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 MRPL27Q9P0M9 148 aaKnown RBP8.77□□□□□ -1.01
CMSS1-208ENST00000496116 TP53TG3Q9ULZ0 132 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 ARHGAP32A7KAX9 2087 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 RELNP78509 3460 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 NBASA2RRP1 2371 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 A0A1W2PRD5 423 aa8.77□□□□□ -1.01
CMSS1-208ENST00000496116 A0A1W2PRF3 423 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms