RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 FKBP1CQ5VVH2 108 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 LPCAT3Q6P1A2 487 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 OR52L1Q8NGH7 329 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 OR51A2Q8NGJ7 313 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 FNDC9Q8TBE3 224 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 ZCCHC13Q8WW36 166 aaKnown RBP2.65□□□□□ -1.99
CCDC39-207ENST00000495817 MGLLQ99685 303 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 NKX6-2Q9C056 277 aaPredicted RBP2.65□□□□□ -1.99
CCDC39-207ENST00000495817 TUBA4BQ9H853 241 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 TPT1P8Q9HAU6 139 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 HES4Q9HCC6 221 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 C14orf105Q9NVL8 296 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 SNX12Q9UMY4 172 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 LRRC37A2A6NM11 1700 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 DMDP11532 3685 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 ZNF236Q9UL36 1845 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 A0A1W2PRE2 83 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 C5orf58C9J3I9 102 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 J3QRE1 110 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 SLC17A3O00476 420 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 LY6HO94772 140 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 C1QCP02747 245 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 SMIM6P0DI80 62 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 SULT1A3P0DMM9 295 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 SULT1A4P0DMN0 295 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 CPMP14384 443 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 GPX2P18283 190 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 CD200P41217 278 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 RAB13P51153 203 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 HIST1H3AP68431 136 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 H3F3AP84243 136 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 EMX1Q04741 257 aaPredicted RBP2.64□□□□□ -1.99
CCDC39-207ENST00000495817 C9orf64Q5T6V5 341 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 N4BP2L1Q5TBK1 243 aaPredicted RBP2.64□□□□□ -1.99
CCDC39-207ENST00000495817 TEX36Q5VZQ5 186 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 HIST2H3AQ71DI3 136 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 UMODL1-AS1Q8N2C9 162 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 OR4C16Q8NGL9 310 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 OR9Q1Q8NGQ5 310 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 OR5C1Q8NGR4 320 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 SKA2Q8WVK7 121 aaPredicted RBP2.64□□□□□ -1.99
CCDC39-207ENST00000495817 DNAJC9Q8WXX5 260 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 CCDC32Q9BV29 185 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 RNASE7Q9H1E1 156 aaKnown RBP2.64□□□□□ -1.99
CCDC39-207ENST00000495817 MED29Q9NX70 200 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 ANGPT4Q9Y264 503 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 PCYT1BQ9Y5K3 369 aaPredicted RBP2.64□□□□□ -1.99
CCDC39-207ENST00000495817 MYH13Q9UKX3 1938 aa2.64□□□□□ -1.99
CCDC39-207ENST00000495817 C5orf42Q9H799 3197 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 BDP1A6H8Y1 2624 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 DCHS1Q96JQ0 3298 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 IGHV3-73A0A0B4J1V6 119 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 C9orf170A2RU37 121 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 GRIFINA4D1Z8 144 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 MAP1LC3B2A6NCE7 125 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 EEF1E1-BLOC1S5C9J1V9 151 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 C3orf84H3BNL1 204 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 M0R381 172 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 TXNDC9O14530 226 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 PFDN1O60925 122 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 SULT1C4O75897 302 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 IGF2P01344 180 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 BPGMP07738 259 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 IL3P08700 152 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 COX4I1P13073 169 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 PSMD8P48556 350 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 SERPINB10P48595 397 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 DEFA1P59665 94 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 HLA-DRB3P79483 266 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 PLPPR5Q32ZL2 321 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 DCUN1D2Q6PH85 259 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 ZNF439Q8NDP4 499 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 OR4K13Q8NH42 304 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 MCFD2Q8NI22 146 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 DCUN1D1Q96GG9 259 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 DNAJC30Q96LL9 226 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 GGACTQ9BVM4 153 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 MAP1LC3BQ9GZQ8 125 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 C16orf95Q9H693 158 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 COA4Q9NYJ1 87 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 PSORS1C2Q9UIG4 136 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 TRANK1O15050 2925 aa2.63□□□□□ -1.99
CCDC39-207ENST00000495817 CFAP54Q96N23 3096 aa2.62□□□□□ -1.99
CCDC39-207ENST00000495817 MYH6P13533 1939 aa2.62□□□□□ -1.99
CCDC39-207ENST00000495817 MYH9P35579 1960 aaKnown RBP2.62□□□□□ -1.99
CCDC39-207ENST00000495817 A0A1B0GVG6 124 aa2.62□□□□□ -1.99
CCDC39-207ENST00000495817 C19orf71A6NCJ1 209 aa2.62□□□□□ -1.99
CCDC39-207ENST00000495817 CYB5BO43169 146 aa2.62□□□□□ -1.99
CCDC39-207ENST00000495817 ORC5O43913 435 aa2.62□□□□□ -1.99
CCDC39-207ENST00000495817 SOD1P00441 154 aa2.62□□□□□ -1.99
CCDC39-207ENST00000495817 TTRP02766 147 aa2.62□□□□□ -1.99
CCDC39-207ENST00000495817 OR5G3P0C626 314 aa2.62□□□□□ -1.99
CCDC39-207ENST00000495817 IFI30P13284 250 aa2.62□□□□□ -1.99
CCDC39-207ENST00000495817 CA5AP35218 305 aa2.62□□□□□ -1.99
CCDC39-207ENST00000495817 HSPE1P61604 102 aaKnown RBP2.62□□□□□ -1.99
CCDC39-207ENST00000495817 PRDX4Q13162 271 aa2.62□□□□□ -1.99
CCDC39-207ENST00000495817 TOMM20LQ6UXN7 152 aa2.62□□□□□ -1.99
CCDC39-207ENST00000495817 ZNF550Q7Z398 422 aa2.62□□□□□ -1.99
CCDC39-207ENST00000495817 JOSD2Q8TAC2 188 aa2.62□□□□□ -1.99
CCDC39-207ENST00000495817 GNPDA2Q8TDQ7 276 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms