RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 TRGV9Q99603 122 aa8.95□□□□□ -0.98
CHMP3-209ENST00000494623 GNB1LQ9BYB4 327 aa8.95□□□□□ -0.98
CHMP3-209ENST00000494623 IGF2RP11717 2491 aa8.95□□□□□ -0.98
CHMP3-209ENST00000494623 ANKHD1Q8IWZ3 2542 aaKnown RBP8.95□□□□□ -0.98
CHMP3-209ENST00000494623 ZZEF1O43149 2961 aa8.95□□□□□ -0.98
CHMP3-209ENST00000494623 DCHS2Q6V1P9 2916 aa8.95□□□□□ -0.98
CHMP3-209ENST00000494623 TEX22C9J3V5 150 aa8.95□□□□□ -0.98
CHMP3-209ENST00000494623 HYPMO75409 117 aa8.95□□□□□ -0.98
CHMP3-209ENST00000494623 SERF1AO75920 110 aa8.95□□□□□ -0.98
CHMP3-209ENST00000494623 RPL19P84098 196 aaKnown RBP8.95□□□□□ -0.98
CHMP3-209ENST00000494623 PRR27Q6MZM9 219 aa8.95□□□□□ -0.98
CHMP3-209ENST00000494623 TMEM116Q8NCL8 245 aa8.95□□□□□ -0.98
CHMP3-209ENST00000494623 HILPDAQ9Y5L2 63 aa8.95□□□□□ -0.98
CHMP3-209ENST00000494623 CNIH1O95406 144 aa8.94□□□□□ -0.98
CHMP3-209ENST00000494623 SLC25A5P05141 298 aaKnown RBP8.94□□□□□ -0.98
CHMP3-209ENST00000494623 NBEAP1P0C6P0 100 aa8.94□□□□□ -0.98
CHMP3-209ENST00000494623 IQCJQ1A5X6 159 aa8.94□□□□□ -0.98
CHMP3-209ENST00000494623 FBXL19-AS1Q494R0 122 aa8.94□□□□□ -0.98
CHMP3-209ENST00000494623 LDLRAD2Q5SZI1 272 aa8.94□□□□□ -0.98
CHMP3-209ENST00000494623 CYB5R2Q6BCY4 276 aa8.94□□□□□ -0.98
CHMP3-209ENST00000494623 PVRIGQ6DKI7 326 aa8.94□□□□□ -0.98
CHMP3-209ENST00000494623 SRSF12Q8WXF0 261 aaKnown RBP8.94□□□□□ -0.98
CHMP3-209ENST00000494623 F11RQ9Y624 299 aaKnown RBP8.94□□□□□ -0.98
CHMP3-209ENST00000494623 A0A1W2PRD5 423 aa8.94□□□□□ -0.98
CHMP3-209ENST00000494623 A0A1W2PRF3 423 aa8.94□□□□□ -0.98
CHMP3-209ENST00000494623 A0A1W2PRM7 423 aa8.94□□□□□ -0.98
CHMP3-209ENST00000494623 SMIM27A0A1W2PRY6 76 aa8.94□□□□□ -0.98
CHMP3-209ENST00000494623 LIPFP07098 398 aa8.94□□□□□ -0.98
CHMP3-209ENST00000494623 CD24P25063 80 aa8.94□□□□□ -0.98
CHMP3-209ENST00000494623 ADORA2A-AS1P86434 159 aa8.94□□□□□ -0.98
CHMP3-209ENST00000494623 TMEM136Q6ZRR5 245 aa8.94□□□□□ -0.98
CHMP3-209ENST00000494623 STXBP6Q8NFX7 210 aa8.94□□□□□ -0.98
CHMP3-209ENST00000494623 RAB1BQ9H0U4 201 aa8.94□□□□□ -0.98
CHMP3-209ENST00000494623 ARHGAP32A7KAX9 2087 aa8.94□□□□□ -0.98
CHMP3-209ENST00000494623 TRBV9A0A0B4J1U6 114 aa8.93□□□□□ -0.98
CHMP3-209ENST00000494623 LY6LH3BQJ8 138 aa8.93□□□□□ -0.98
CHMP3-209ENST00000494623 TIMM23O14925 209 aa8.93□□□□□ -0.98
CHMP3-209ENST00000494623 LINC00310P59036 64 aa8.93□□□□□ -0.98
CHMP3-209ENST00000494623 REC114Q7Z4M0 266 aa8.93□□□□□ -0.98
CHMP3-209ENST00000494623 WNT10AQ9GZT5 417 aa8.93□□□□□ -0.98
CHMP3-209ENST00000494623 EPDR1Q9UM22 224 aa8.93□□□□□ -0.98
CHMP3-209ENST00000494623 A0A1B0GV90 55 aa8.93□□□□□ -0.98
CHMP3-209ENST00000494623 ZNF705FA8MVS1 300 aaPredicted RBP8.93□□□□□ -0.98
CHMP3-209ENST00000494623 CORTO00230 105 aa8.93□□□□□ -0.98
CHMP3-209ENST00000494623 RBP4P02753 201 aa8.93□□□□□ -0.98
CHMP3-209ENST00000494623 ZNF705DP0CH99 300 aaPredicted RBP8.93□□□□□ -0.98
CHMP3-209ENST00000494623 ZNF705BP0CI00 300 aaPredicted RBP8.93□□□□□ -0.98
CHMP3-209ENST00000494623 TPPP2P59282 170 aa8.93□□□□□ -0.98
CHMP3-209ENST00000494623 LYZP61626 148 aa8.93□□□□□ -0.98
CHMP3-209ENST00000494623 UBE2G1P62253 170 aa8.93□□□□□ -0.98
CHMP3-209ENST00000494623 KLRB1Q12918 225 aa8.93□□□□□ -0.98
CHMP3-209ENST00000494623 WDR73Q6P4I2 378 aa8.93□□□□□ -0.98
CHMP3-209ENST00000494623 NUDT10Q8NFP7 164 aa8.93□□□□□ -0.98
CHMP3-209ENST00000494623 NUDT11Q96G61 164 aa8.93□□□□□ -0.98
CHMP3-209ENST00000494623 ATRXP46100 2492 aa8.93□□□□□ -0.98
CHMP3-209ENST00000494623 A8MWP6 167 aa8.92□□□□□ -0.98
CHMP3-209ENST00000494623 PSG1P11464 419 aa8.92□□□□□ -0.98
CHMP3-209ENST00000494623 MYCNOSP40205 109 aa8.92□□□□□ -0.98
CHMP3-209ENST00000494623 MMDQ15546 238 aa8.92□□□□□ -0.98
CHMP3-209ENST00000494623 SSX2Q16385 188 aa8.92□□□□□ -0.98
CHMP3-209ENST00000494623 C8orf46Q8TAG6 207 aa8.92□□□□□ -0.98
CHMP3-209ENST00000494623 GNB4Q9HAV0 340 aa8.92□□□□□ -0.98
CHMP3-209ENST00000494623 NAGKQ9UJ70 344 aa8.92□□□□□ -0.98
CHMP3-209ENST00000494623 IZUMO1RA6ND01 250 aa8.92□□□□□ -0.98
CHMP3-209ENST00000494623 AMY1AP04745 511 aa8.92□□□□□ -0.98
CHMP3-209ENST00000494623 HTR1DP28221 377 aa8.92□□□□□ -0.98
CHMP3-209ENST00000494623 PAFAH1B2P68402 229 aa8.92□□□□□ -0.98
CHMP3-209ENST00000494623 KLRD1Q13241 179 aa8.92□□□□□ -0.98
CHMP3-209ENST00000494623 TPTE2P1Q5T6R2 138 aa8.92□□□□□ -0.98
CHMP3-209ENST00000494623 NOL4LQ96MY1 436 aaPredicted RBP8.92□□□□□ -0.98
CHMP3-209ENST00000494623 HSPB9Q9BQS6 159 aa8.92□□□□□ -0.98
CHMP3-209ENST00000494623 COL25A1Q9BXS0 654 aaPredicted RBP8.92□□□□□ -0.98
CHMP3-209ENST00000494623 SAMD10Q9BYL1 202 aa8.92□□□□□ -0.98
CHMP3-209ENST00000494623 ZNF331Q9NQX6 463 aaPredicted RBP8.92□□□□□ -0.98
CHMP3-209ENST00000494623 MT-ND6P03923 174 aa8.91□□□□□ -0.98
CHMP3-209ENST00000494623 Q0VG73 95 aa8.91□□□□□ -0.98
CHMP3-209ENST00000494623 TMEM183BQ1AE95 376 aa8.91□□□□□ -0.98
CHMP3-209ENST00000494623 Q6ZWC4 215 aa8.91□□□□□ -0.98
CHMP3-209ENST00000494623 LY6G5BQ8NDX9 201 aa8.91□□□□□ -0.98
CHMP3-209ENST00000494623 TIMD4Q96H15 378 aa8.91□□□□□ -0.98
CHMP3-209ENST00000494623 FAM103A1Q9BTL3 118 aaKnown RBP8.91□□□□□ -0.98
CHMP3-209ENST00000494623 CBY1Q9Y3M2 126 aa8.91□□□□□ -0.98
CHMP3-209ENST00000494623 IGLC1P0CG04 106 aa8.91□□□□□ -0.98
CHMP3-209ENST00000494623 GRAMD2BQ96HH9 432 aa8.91□□□□□ -0.98
CHMP3-209ENST00000494623 TBX15Q96SF7 602 aa8.91□□□□□ -0.98
CHMP3-209ENST00000494623 DPM3Q9P2X0 92 aa8.91□□□□□ -0.98
CHMP3-209ENST00000494623 HIGD1AQ9Y241 93 aa8.91□□□□□ -0.98
CHMP3-209ENST00000494623 I3L2K1 104 aa8.9□□□□□ -0.98
CHMP3-209ENST00000494623 UCNP55089 124 aa8.9□□□□□ -0.98
CHMP3-209ENST00000494623 HES1Q14469 280 aa8.9□□□□□ -0.98
CHMP3-209ENST00000494623 RNF5Q99942 180 aa8.9□□□□□ -0.98
CHMP3-209ENST00000494623 RASL11BQ9BPW5 248 aa8.9□□□□□ -0.98
CHMP3-209ENST00000494623 CBLN4Q9NTU7 201 aa8.9□□□□□ -0.98
CHMP3-209ENST00000494623 LOC105371242A0A075B767 164 aa8.9□□□□□ -0.98
CHMP3-209ENST00000494623 ZNF253O75346 499 aa8.9□□□□□ -0.98
CHMP3-209ENST00000494623 APCSP02743 223 aa8.9□□□□□ -0.98
CHMP3-209ENST00000494623 GP9P14770 177 aa8.9□□□□□ -0.98
CHMP3-209ENST00000494623 PAX1P15863 534 aa8.9□□□□□ -0.98
CHMP3-209ENST00000494623 SRIP30626 198 aa8.9□□□□□ -0.98
CHMP3-209ENST00000494623 USF2Q15853 346 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms