RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 RNF144BQ7Z419 303 aa15.78■□□□□ 0.12
COL27A1-207ENST00000494090 FREM3P0C091 2139 aa15.78■□□□□ 0.12
COL27A1-207ENST00000494090 TSPAN13O95857 204 aa15.78■□□□□ 0.12
COL27A1-207ENST00000494090 FOXL2NBQ6ZUU3 175 aa15.78■□□□□ 0.12
COL27A1-207ENST00000494090 M0R1W7 72 aa15.77■□□□□ 0.12
COL27A1-207ENST00000494090 IGHV1-8P0DP01 117 aa15.77■□□□□ 0.12
COL27A1-207ENST00000494090 SLC25A15Q9Y619 301 aa15.77■□□□□ 0.12
COL27A1-207ENST00000494090 OR10W1Q8NGF6 305 aa15.77■□□□□ 0.12
COL27A1-207ENST00000494090 TMEM178BH3BS89 294 aa15.77■□□□□ 0.11
COL27A1-207ENST00000494090 Q0VFX4 171 aa15.77■□□□□ 0.11
COL27A1-207ENST00000494090 RPP25LQ8N5L8 163 aaKnown RBP15.77■□□□□ 0.11
COL27A1-207ENST00000494090 CHCHD1Q96BP2 118 aaKnown RBP15.77■□□□□ 0.11
COL27A1-207ENST00000494090 CRPP02741 224 aa15.77■□□□□ 0.11
COL27A1-207ENST00000494090 CFPP27918 469 aa15.77■□□□□ 0.11
COL27A1-207ENST00000494090 ST6GALNAC3Q8NDV1 305 aa15.77■□□□□ 0.11
COL27A1-207ENST00000494090 MBNL3Q9NUK0 354 aaKnown RBP15.77■□□□□ 0.11
COL27A1-207ENST00000494090 PCP4P48539 62 aa15.76■□□□□ 0.11
COL27A1-207ENST00000494090 TPTE2P1Q5T6R2 138 aa15.76■□□□□ 0.11
COL27A1-207ENST00000494090 CD24P25063 80 aa15.76■□□□□ 0.11
COL27A1-207ENST00000494090 GLMPQ8WWB7 406 aa15.76■□□□□ 0.11
COL27A1-207ENST00000494090 PLXNA3P51805 1871 aa15.76■□□□□ 0.11
COL27A1-207ENST00000494090 SDK2Q58EX2 2172 aa15.76■□□□□ 0.11
COL27A1-207ENST00000494090 ZNF585BQ52M93 769 aa15.75■□□□□ 0.11
COL27A1-207ENST00000494090 CD177Q8N6Q3 437 aa15.75■□□□□ 0.11
COL27A1-207ENST00000494090 NDUFA3O95167 84 aa15.75■□□□□ 0.11
COL27A1-207ENST00000494090 PRB3Q04118 309 aaPredicted RBP15.75■□□□□ 0.11
COL27A1-207ENST00000494090 SBF1O95248 1867 aa15.75■□□□□ 0.11
COL27A1-207ENST00000494090 HGFACQ04756 655 aa15.75■□□□□ 0.11
COL27A1-207ENST00000494090 DTX1Q86Y01 620 aa15.75■□□□□ 0.11
COL27A1-207ENST00000494090 C10orf126Q8N4M7 172 aa15.75■□□□□ 0.11
COL27A1-207ENST00000494090 TRAV5A0A0B4J249 113 aa15.75■□□□□ 0.11
COL27A1-207ENST00000494090 FBLN7Q53RD9 439 aa15.75■□□□□ 0.11
COL27A1-207ENST00000494090 VMO1Q7Z5L0 202 aa15.75■□□□□ 0.11
COL27A1-207ENST00000494090 RNF182Q8N6D2 247 aa15.75■□□□□ 0.11
COL27A1-207ENST00000494090 AGMATQ9BSE5 352 aa15.75■□□□□ 0.11
COL27A1-207ENST00000494090 TRPM7Q96QT4 1865 aa15.75■□□□□ 0.11
COL27A1-207ENST00000494090 B3GALT5-AS1P59052 145 aa15.75■□□□□ 0.11
COL27A1-207ENST00000494090 Q6P435 159 aa15.75■□□□□ 0.11
COL27A1-207ENST00000494090 LINC01551Q86U37 167 aa15.75■□□□□ 0.11
COL27A1-207ENST00000494090 MDS2Q8NDY4 140 aa15.75■□□□□ 0.11
COL27A1-207ENST00000494090 SPCS1Q9Y6A9 102 aa15.75■□□□□ 0.11
COL27A1-207ENST00000494090 MBD3L4A6NDZ8 208 aaPredicted RBP15.74■□□□□ 0.11
COL27A1-207ENST00000494090 MBD3L3A6NE82 208 aaPredicted RBP15.74■□□□□ 0.11
COL27A1-207ENST00000494090 MBD3L5A6NJ08 208 aaPredicted RBP15.74■□□□□ 0.11
COL27A1-207ENST00000494090 ASCL4Q6XD76 172 aa15.74■□□□□ 0.11
COL27A1-207ENST00000494090 BEND2Q8NDZ0 799 aa15.74■□□□□ 0.11
COL27A1-207ENST00000494090 MBD3L2Q8NHZ7 208 aaPredicted RBP15.74■□□□□ 0.11
COL27A1-207ENST00000494090 MGST2Q99735 147 aa15.74■□□□□ 0.11
COL27A1-207ENST00000494090 DPM2O94777 84 aa15.74■□□□□ 0.11
COL27A1-207ENST00000494090 TMEM200BQ69YZ2 307 aa15.74■□□□□ 0.11
COL27A1-207ENST00000494090 AMBPP02760 352 aa15.74■□□□□ 0.11
COL27A1-207ENST00000494090 SEPSECSQ9HD40 501 aaKnown RBP15.74■□□□□ 0.11
COL27A1-207ENST00000494090 IGHV1-3A0A0C4DH29 117 aa15.73■□□□□ 0.11
COL27A1-207ENST00000494090 A0A1B0GWJ7 208 aa15.73■□□□□ 0.11
COL27A1-207ENST00000494090 ARHGEF17Q96PE2 2063 aaPredicted RBP15.73■□□□□ 0.11
COL27A1-207ENST00000494090 SPATA31B1PQ5VZV4 182 aa15.73■□□□□ 0.11
COL27A1-207ENST00000494090 RLFQ13129 1914 aa15.73■□□□□ 0.11
COL27A1-207ENST00000494090 A0A1B0GWB2 263 aa15.73■□□□□ 0.11
COL27A1-207ENST00000494090 FAM169BQ8N8A8 192 aa15.73■□□□□ 0.11
COL27A1-207ENST00000494090 C5orf30Q96GV9 206 aa15.73■□□□□ 0.11
COL27A1-207ENST00000494090 VGLL1Q99990 258 aa15.73■□□□□ 0.11
COL27A1-207ENST00000494090 PGPEP1Q9NXJ5 209 aa15.73■□□□□ 0.11
COL27A1-207ENST00000494090 APOMO95445 188 aa15.72■□□□□ 0.11
COL27A1-207ENST00000494090 TRGV9Q99603 122 aa15.72■□□□□ 0.11
COL27A1-207ENST00000494090 PRADC1Q9BSG0 188 aa15.72■□□□□ 0.11
COL27A1-207ENST00000494090 MDC1Q14676 2089 aaKnown RBP15.72■□□□□ 0.11
COL27A1-207ENST00000494090 SLC25A16P16260 332 aa15.72■□□□□ 0.11
COL27A1-207ENST00000494090 GFI1BQ5VTD9 330 aa15.72■□□□□ 0.11
COL27A1-207ENST00000494090 SLC25A48Q6ZT89 311 aaKnown RBP15.72■□□□□ 0.11
COL27A1-207ENST00000494090 C9orf139Q6ZV77 190 aa15.72■□□□□ 0.11
COL27A1-207ENST00000494090 CLDN16Q9Y5I7 305 aa15.72■□□□□ 0.11
COL27A1-207ENST00000494090 TRBV7-1A0A0A6YYK4 115 aa15.72■□□□□ 0.11
COL27A1-207ENST00000494090 SELLP14151 372 aa15.72■□□□□ 0.11
COL27A1-207ENST00000494090 C15orf32Q32M92 178 aa15.72■□□□□ 0.11
COL27A1-207ENST00000494090 COQ2Q96H96 371 aa15.72■□□□□ 0.11
COL27A1-207ENST00000494090 LY96Q9Y6Y9 160 aa15.72■□□□□ 0.11
COL27A1-207ENST00000494090 CA1P00915 261 aaPredicted RBP15.71■□□□□ 0.11
COL27A1-207ENST00000494090 PLNP26678 52 aa15.71■□□□□ 0.11
COL27A1-207ENST00000494090 SLC25A2Q9BXI2 301 aa15.71■□□□□ 0.11
COL27A1-207ENST00000494090 CD28P10747 220 aa15.71■□□□□ 0.11
COL27A1-207ENST00000494090 RASL11AQ6T310 242 aa15.71■□□□□ 0.11
COL27A1-207ENST00000494090 USMG5Q96IX5 58 aa15.71■□□□□ 0.11
COL27A1-207ENST00000494090 IGHG3P01860 377 aa15.71■□□□□ 0.11
COL27A1-207ENST00000494090 NSUN5P1Q3KNT7 163 aa15.71■□□□□ 0.11
COL27A1-207ENST00000494090 SNRNP200O75643 2136 aaKnown RBP15.71■□□□□ 0.1
COL27A1-207ENST00000494090 TYMSP04818 313 aa15.7■□□□□ 0.1
COL27A1-207ENST00000494090 Q6ZS92 163 aa15.7■□□□□ 0.1
COL27A1-207ENST00000494090 TMEM86BQ8N661 226 aa15.7■□□□□ 0.1
COL27A1-207ENST00000494090 RFNGQ9Y644 331 aa15.7■□□□□ 0.1
COL27A1-207ENST00000494090 RTTNQ86VV8 2226 aa15.7■□□□□ 0.1
COL27A1-207ENST00000494090 C10orf55Q5SWW7 151 aa15.7■□□□□ 0.1
COL27A1-207ENST00000494090 SMPXQ9UHP9 88 aa15.7■□□□□ 0.1
COL27A1-207ENST00000494090 MLNRO43193 412 aa15.7■□□□□ 0.1
COL27A1-207ENST00000494090 UNQ6494/PRO21346Q6UXR6 183 aa15.7■□□□□ 0.1
COL27A1-207ENST00000494090 CHCHD5Q9BSY4 110 aa15.7■□□□□ 0.1
COL27A1-207ENST00000494090 VWA8A3KMH1 1905 aa15.7■□□□□ 0.1
COL27A1-207ENST00000494090 TRAV3A0A0B4J244 114 aa15.7■□□□□ 0.1
COL27A1-207ENST00000494090 LILRA1O75019 489 aa15.7■□□□□ 0.1
COL27A1-207ENST00000494090 CACNA1EQ15878 2313 aa15.69■□□□□ 0.1
COL27A1-207ENST00000494090 ADARB2-AS1A8MUL3 147 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms