RNA–Protein interactions for RNA: ENST00000493619.1

RTN4IP1-202, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 3

Gene RTN4IP1, Length 208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-202ENST00000493619 GPR107Q5VW38 600 aa4.27□□□□□ -1.73
RTN4IP1-202ENST00000493619 WDR73Q6P4I2 378 aa4.27□□□□□ -1.73
RTN4IP1-202ENST00000493619 HAPLN4Q86UW8 402 aa4.27□□□□□ -1.73
RTN4IP1-202ENST00000493619 OR10W1Q8NGF6 305 aa4.27□□□□□ -1.73
RTN4IP1-202ENST00000493619 RAB2BQ8WUD1 216 aa4.27□□□□□ -1.73
RTN4IP1-202ENST00000493619 TMEM230Q96A57 120 aa4.27□□□□□ -1.73
RTN4IP1-202ENST00000493619 MRGPRFQ96AM1 343 aa4.27□□□□□ -1.73
RTN4IP1-202ENST00000493619 TMEM222Q9H0R3 208 aa4.27□□□□□ -1.73
RTN4IP1-202ENST00000493619 COMMD3Q9UBI1 195 aa4.27□□□□□ -1.73
RTN4IP1-202ENST00000493619 DYNC2H1Q8NCM8 4307 aaKnown RBP4.27□□□□□ -1.73
RTN4IP1-202ENST00000493619 DNAH1Q9P2D7 4330 aa4.27□□□□□ -1.73
RTN4IP1-202ENST00000493619 TEX13DA0A0J9YY54 714 aaPredicted RBP4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 ZNF705EA8MWA4 302 aaPredicted RBP4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 DIRC3C9JPN6 131 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 RAB3DO95716 219 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 TMEM50AO95807 157 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 P0C879 139 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 AKAIN1P0CW23 69 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 HLA-DMAP28067 261 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 GPX4P36969 197 aaPredicted RBP4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 ALDH3B2P48448 385 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 RAB11AP62491 216 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 DEFB135Q30KP9 77 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 PHLDA2Q53GA4 152 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 STEAP1BQ6NZ63 245 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 TCF24Q7RTU0 167 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 PHLDA1Q8WV24 401 aaPredicted RBP4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 SMIM4Q8WVI0 70 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 ZNF414Q96IQ9 312 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 C20orf173Q96LM9 149 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 RNF2Q99496 336 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 SLC25A21Q9BQT8 299 aaPredicted RBP4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 CHRDL1Q9BU40 450 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 RNF126Q9BV68 326 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 FUNDC2Q9BWH2 189 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 MRPS26Q9BYN8 205 aaKnown RBP4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 NRN1Q9NPD7 142 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 CLEC5AQ9NY25 188 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 CCDC59Q9P031 241 aaKnown RBP4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 PUS1Q9Y606 427 aaKnown RBP eCLIP4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 TMEM56-RWDD3S4R434 201 aa4.26□□□□□ -1.73
RTN4IP1-202ENST00000493619 TRAV10A0A0B4J240 114 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 TRAV3A0A0B4J244 114 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 A0A0B4J2A0 478 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 A0A0J9YWU9 116 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 A0A1B0GU03 582 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 SMIM30A4D0T7 59 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 CRYM-AS1A6NIL9 109 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 ANKRD65E5RJM6 399 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 K7EQG2 157 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 LY6G6CO95867 125 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 TOMM40O96008 361 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 CA1P00915 261 aaPredicted RBP4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 IGHV3-23P01764 117 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 SULT1A3P0DMM9 295 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 SULT1A4P0DMN0 295 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 P0DMU3 169 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 FAM231AP0DMU4 169 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 FAM231CP0DMU5 169 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 RNASE2P10153 161 aaKnown RBP4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 HOXA5P20719 270 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 NKX2-1P43699 371 aaPredicted RBP4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 TMBIM6P55061 237 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 LINC00310P59036 64 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 DEFA5Q01523 94 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 OXA1LQ15070 435 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 SOHLH1Q5JUK2 328 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 GGNBP1Q5YKI7 109 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 TOMM20LQ6UXN7 152 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 GPR141Q7Z602 305 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 SNX29P2Q8IUI4 249 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 OR51G1Q8NGK1 321 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 OR4D5Q8NGN0 318 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 OR11H2Q8NH07 326 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 PINX1Q96BK5 328 aaKnown RBP4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 MS4A6AQ9H2W1 248 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 NAA60Q9H7X0 242 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 EXTL2Q9UBQ6 330 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 SHPKQ9UHJ6 478 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 RABAC1Q9UI14 185 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 RYR2Q92736 4967 aa4.25□□□□□ -1.73
RTN4IP1-202ENST00000493619 SACSQ9NZJ4 4579 aa4.24□□□□□ -1.73
RTN4IP1-202ENST00000493619 FNDC10F2Z333 226 aa4.24□□□□□ -1.73
RTN4IP1-202ENST00000493619 RGS5O15539 181 aa4.24□□□□□ -1.73
RTN4IP1-202ENST00000493619 CD3DP04234 171 aa4.24□□□□□ -1.73
RTN4IP1-202ENST00000493619 ELK1P19419 428 aa4.24□□□□□ -1.73
RTN4IP1-202ENST00000493619 ANXA7P20073 488 aaKnown RBP4.24□□□□□ -1.73
RTN4IP1-202ENST00000493619 OR10J1P30954 320 aa4.24□□□□□ -1.73
RTN4IP1-202ENST00000493619 P2RY1P47900 373 aa4.24□□□□□ -1.73
RTN4IP1-202ENST00000493619 PSMB3P49720 205 aa4.24□□□□□ -1.73
RTN4IP1-202ENST00000493619 MFAP2P55001 183 aa4.24□□□□□ -1.73
RTN4IP1-202ENST00000493619 SUPT4H1P63272 117 aaKnown RBP4.24□□□□□ -1.73
RTN4IP1-202ENST00000493619 SMCO1Q147U7 214 aa4.24□□□□□ -1.73
RTN4IP1-202ENST00000493619 TMEM128Q5BJH2 165 aa4.24□□□□□ -1.73
RTN4IP1-202ENST00000493619 NMSQ5H8A3 153 aa4.24□□□□□ -1.73
RTN4IP1-202ENST00000493619 PXDC1Q5TGL8 231 aa4.24□□□□□ -1.73
RTN4IP1-202ENST00000493619 TRPT1Q86TN4 253 aaKnown RBP4.24□□□□□ -1.73
RTN4IP1-202ENST00000493619 LGI3Q8N145 548 aa4.24□□□□□ -1.73
RTN4IP1-202ENST00000493619 LRTM2Q8N967 370 aa4.24□□□□□ -1.73
RTN4IP1-202ENST00000493619 CYYR1Q96J86 154 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms