RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 IFNA5P01569 189 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 IFNA16P05015 189 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 TPM3P06753 285 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 S100A4P26447 101 aaKnown RBP0□□□□□ -2.41
SYCP1-208ENST00000493377 AP3S2P59780 193 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 IMPG1Q17R60 797 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 SPRNQ5BIV9 151 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 CDKL4Q5MAI5 379 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 BRMS1LQ5PSV4 323 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 CCDC122Q5T0U0 273 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 SPOPLQ6IQ16 392 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 KRTAP26-1Q6PEX3 210 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 GKN2Q86XP6 184 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 LYSMD1Q96S90 227 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 OR51V1Q9H2C8 321 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 TMEM133Q9H2Q1 129 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 VPS29Q9UBQ0 182 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 RIMBP3Q9UFD9 1639 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 NOSIPQ9Y314 301 aaKnown RBP0□□□□□ -2.41
SYCP1-208ENST00000493377 V9GYY5 206 aaPredicted RBP0□□□□□ -2.41
SYCP1-208ENST00000493377 ANKRD17O75179 2603 aaKnown RBP-0□□□□□ -2.41
SYCP1-208ENST00000493377 SSPOA2VEC9 5147 aa-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 NCOA1Q15788 1441 aa-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 IGLV3-32A0A0A0MS00 114 aa-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 TRAV3A0A0B4J244 114 aa-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 J3QRK9 145 aa-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 M0R036 132 aa-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 PIRO00625 290 aa-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 CRYZL1O95825 349 aa-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 IGLV3-1P01715 115 aa-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 ANP32AP39687 249 aaKnown RBP-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 TPM4P67936 248 aa-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 C12orf74Q32Q52 190 aa-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 SPINK9Q5DT21 86 aa-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 FAM74A1Q5RGS3 127 aa-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 Q8IYB0 196 aa-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 ATOH7Q8N100 152 aa-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 LINC00301Q8NCQ3 95 aa-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 DCUN1D1Q96GG9 259 aa-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 HIST1H2BLQ99880 126 aa-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 TMEM14CQ9P0S9 112 aa-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 MEGF8Q7Z7M0 2845 aa-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 SYNE1Q8NF91 8797 aaKnown RBP-0.01□□□□□ -2.41
SYCP1-208ENST00000493377 KNTC1P50748 2209 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 CECR2Q9BXF3 1484 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 FAM236DA0A1B0GTK5 79 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 TLCD2A6NGC4 264 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 CLDN24A6NM45 220 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 KPNA3O00505 521 aaPredicted RBP-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 CNIH1O95406 144 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 AHSA1O95433 338 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 FAM236CP0DP71 79 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 CASP1P29466 404 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 HOXA6P31267 233 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 RNASE4P34096 147 aaKnown RBP-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 FOXA3P55318 350 aaPredicted RBP-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 C8orf74Q6P047 294 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 ZNF833PQ6ZTB9 187 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 CLECL1Q8IZS7 167 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 CLDN22Q8N7P3 220 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 GDPD1Q8N9F7 314 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 OR11H6Q8NGC7 330 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 OR2T10Q8NGZ9 312 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 WFDC5Q8TCV5 224 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 CT55Q8WUE5 264 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 BORCS7Q96B45 105 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 LINC00052Q96N35 136 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 GPER1Q99527 375 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 LINC00467Q9BRT7 94 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 BCL2L10Q9HD36 194 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 NIT2Q9NQR4 276 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 UBAP1Q9NZ09 502 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 ORMDL1Q9P0S3 153 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 PKIGQ9Y2B9 76 aa-0.02□□□□□ -2.41
SYCP1-208ENST00000493377 PIK3C2GO75747 1445 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 RFX7Q2KHR2 1363 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 NUP98P52948 1817 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 A0A087WSZ3 146 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 A0A087WUJ7 227 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 TCRBV4S1A1TA0A5B7 111 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 hADV38S2A0JD32 116 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 TNNC2P02585 160 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 PPIBP23284 216 aaKnown RBP-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 OMPP47874 163 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 ROMO1P60602 79 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 HIST1H3AP68431 136 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 H3F3AP84243 136 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 COTL1Q14019 142 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 HAGHLQ6PII5 290 aaPredicted RBP-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 Q6Q795 121 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 KRT222Q8N1A0 295 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 EXOC3-AS1Q8N2X6 119 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 TMEM254Q8TBM7 123 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 SLAMF6Q96DU3 332 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 C8orf76Q96K31 380 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 TP53RKQ96S44 253 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 CCDC90BQ9GZT6 254 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 C6orf62Q9GZU0 229 aaPredicted RBP-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 TMEM126AQ9H061 195 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 TLNRD1Q9H1K6 362 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms