RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 GNLYP22749 145 aa13.4□□□□□ -0.26
BRAT1-206ENST00000493232 C5orf64Q2M2E5 130 aa13.4□□□□□ -0.26
BRAT1-206ENST00000493232 FAM169BQ8N8A8 192 aa13.4□□□□□ -0.26
BRAT1-206ENST00000493232 SLC25A39Q9BZJ4 359 aaPredicted RBP13.4□□□□□ -0.26
BRAT1-206ENST00000493232 SMPXQ9UHP9 88 aa13.4□□□□□ -0.26
BRAT1-206ENST00000493232 TRAV9-2A0A087WT02 112 aa13.4□□□□□ -0.26
BRAT1-206ENST00000493232 CD33P20138 364 aa13.4□□□□□ -0.26
BRAT1-206ENST00000493232 TMEM86BQ8N661 226 aa13.4□□□□□ -0.26
BRAT1-206ENST00000493232 TMEM242Q9NWH2 141 aa13.4□□□□□ -0.26
BRAT1-206ENST00000493232 IGKV3D-20A0A0C4DH25 116 aa13.4□□□□□ -0.26
BRAT1-206ENST00000493232 PPIFP30405 207 aaKnown RBP13.4□□□□□ -0.26
BRAT1-206ENST00000493232 USMG5Q96IX5 58 aa13.4□□□□□ -0.26
BRAT1-206ENST00000493232 SLC25A16P16260 332 aa13.4□□□□□ -0.26
BRAT1-206ENST00000493232 Q6ZS92 163 aa13.4□□□□□ -0.26
BRAT1-206ENST00000493232 TRAV5A0A0B4J249 113 aa13.4□□□□□ -0.27
BRAT1-206ENST00000493232 TYMSP04818 313 aa13.4□□□□□ -0.27
BRAT1-206ENST00000493232 C3orf36Q3SXR2 165 aa13.4□□□□□ -0.27
BRAT1-206ENST00000493232 PNRC2Q9NPJ4 139 aaKnown RBP13.4□□□□□ -0.27
BRAT1-206ENST00000493232 PMS2P5A8MQ11 134 aa13.39□□□□□ -0.27
BRAT1-206ENST00000493232 UNQ6494/PRO21346Q6UXR6 183 aa13.39□□□□□ -0.27
BRAT1-206ENST00000493232 C11orf44Q8N8P7 122 aa13.39□□□□□ -0.27
BRAT1-206ENST00000493232 OR9G4Q8NGQ1 327 aa13.39□□□□□ -0.27
BRAT1-206ENST00000493232 IGKCP01834 107 aa13.39□□□□□ -0.27
BRAT1-206ENST00000493232 GAFA1Q96PS6 74 aa13.39□□□□□ -0.27
BRAT1-206ENST00000493232 H0YJW9 148 aa13.39□□□□□ -0.27
BRAT1-206ENST00000493232 H3BUX3 64 aa13.39□□□□□ -0.27
BRAT1-206ENST00000493232 ZNF688P0C7X2 276 aa13.39□□□□□ -0.27
BRAT1-206ENST00000493232 KLRD1Q13241 179 aa13.39□□□□□ -0.27
BRAT1-206ENST00000493232 TMEM219Q86XT9 240 aa13.39□□□□□ -0.27
BRAT1-206ENST00000493232 LAMTOR2Q9Y2Q5 125 aa13.39□□□□□ -0.27
BRAT1-206ENST00000493232 TRPM7Q96QT4 1865 aa13.39□□□□□ -0.27
BRAT1-206ENST00000493232 GFI1BQ5VTD9 330 aa13.39□□□□□ -0.27
BRAT1-206ENST00000493232 MORN3Q6PF18 240 aaPredicted RBP13.39□□□□□ -0.27
BRAT1-206ENST00000493232 NPIPB5A8MRT5 1133 aa13.38□□□□□ -0.27
BRAT1-206ENST00000493232 ATRAIDQ6UW56 229 aa13.38□□□□□ -0.27
BRAT1-206ENST00000493232 VSIRQ9H7M9 311 aa13.38□□□□□ -0.27
BRAT1-206ENST00000493232 IFI27L1Q96BM0 104 aa13.38□□□□□ -0.27
BRAT1-206ENST00000493232 CACNA1EQ15878 2313 aa13.38□□□□□ -0.27
BRAT1-206ENST00000493232 ALPK2Q86TB3 2170 aa13.38□□□□□ -0.27
BRAT1-206ENST00000493232 SRD5A1P18405 259 aa13.38□□□□□ -0.27
BRAT1-206ENST00000493232 NMSQ5H8A3 153 aa13.38□□□□□ -0.27
BRAT1-206ENST00000493232 RCHY1Q96PM5 261 aa13.38□□□□□ -0.27
BRAT1-206ENST00000493232 SCN8AQ9UQD0 1980 aa13.38□□□□□ -0.27
BRAT1-206ENST00000493232 CHD5Q8TDI0 1954 aa13.38□□□□□ -0.27
BRAT1-206ENST00000493232 ZNF138P52744 262 aa13.38□□□□□ -0.27
BRAT1-206ENST00000493232 ERVK11-1P61568 191 aa13.38□□□□□ -0.27
BRAT1-206ENST00000493232 PAX2Q02962 417 aa13.38□□□□□ -0.27
BRAT1-206ENST00000493232 LTBP1Q14766 1721 aa13.38□□□□□ -0.27
BRAT1-206ENST00000493232 LCTP09848 1927 aa13.38□□□□□ -0.27
BRAT1-206ENST00000493232 IGKV2-40A0A087WW87 121 aaPredicted RBP13.37□□□□□ -0.27
BRAT1-206ENST00000493232 A0A1B0GW64 132 aa13.37□□□□□ -0.27
BRAT1-206ENST00000493232 FAM223BA6NKX1 122 aa13.37□□□□□ -0.27
BRAT1-206ENST00000493232 BUB1B-PAK6H3BSN5 160 aa13.37□□□□□ -0.27
BRAT1-206ENST00000493232 IGKV2D-40P01614 121 aaPredicted RBP13.37□□□□□ -0.27
BRAT1-206ENST00000493232 RASL11AQ6T310 242 aa13.37□□□□□ -0.27
BRAT1-206ENST00000493232 TMEM14EPQ6UXP3 125 aa13.37□□□□□ -0.27
BRAT1-206ENST00000493232 FAM223AQ8IWN6 122 aa13.37□□□□□ -0.27
BRAT1-206ENST00000493232 BMPERQ8N8U9 685 aa13.37□□□□□ -0.27
BRAT1-206ENST00000493232 PDCD11Q14690 1871 aaKnown RBP13.37□□□□□ -0.27
BRAT1-206ENST00000493232 EVI2AP22794 236 aa13.37□□□□□ -0.27
BRAT1-206ENST00000493232 RPL15P61313 204 aaKnown RBP13.37□□□□□ -0.27
BRAT1-206ENST00000493232 ZNF415Q09FC8 603 aa13.37□□□□□ -0.27
BRAT1-206ENST00000493232 OR5A1Q8NGJ0 315 aa13.37□□□□□ -0.27
BRAT1-206ENST00000493232 SCRT1Q9BWW7 348 aa13.37□□□□□ -0.27
BRAT1-206ENST00000493232 ZNF815PA8K554 130 aa13.37□□□□□ -0.27
BRAT1-206ENST00000493232 LAGE3Q14657 143 aa13.37□□□□□ -0.27
BRAT1-206ENST00000493232 C1QL4Q86Z23 238 aa13.37□□□□□ -0.27
BRAT1-206ENST00000493232 LINC00477Q96M19 166 aa13.37□□□□□ -0.27
BRAT1-206ENST00000493232 ESPL1Q14674 2120 aa13.37□□□□□ -0.27
BRAT1-206ENST00000493232 SRSF3P84103 164 aaKnown RBP13.37□□□□□ -0.27
BRAT1-206ENST00000493232 LINC00469Q8N7U9 141 aa13.37□□□□□ -0.27
BRAT1-206ENST00000493232 TCRAP04437 139 aa13.36□□□□□ -0.27
BRAT1-206ENST00000493232 TMEM155Q4W5P6 130 aa13.36□□□□□ -0.27
BRAT1-206ENST00000493232 NHP2Q9NX24 153 aaKnown RBP13.36□□□□□ -0.27
BRAT1-206ENST00000493232 A0A087WX48 190 aa13.36□□□□□ -0.27
BRAT1-206ENST00000493232 LILRA1O75019 489 aa13.36□□□□□ -0.27
BRAT1-206ENST00000493232 B3GALT5-AS1P59052 145 aa13.36□□□□□ -0.27
BRAT1-206ENST00000493232 GSN-AS1Q9NRJ2 163 aa13.36□□□□□ -0.27
BRAT1-206ENST00000493232 TRBV24-1A0A075B6N3 115 aa13.36□□□□□ -0.27
BRAT1-206ENST00000493232 IGKV1-5P01602 117 aa13.36□□□□□ -0.27
BRAT1-206ENST00000493232 RPL36AP83881 106 aaKnown RBP13.36□□□□□ -0.27
BRAT1-206ENST00000493232 RPL36ALQ969Q0 106 aaKnown RBP13.36□□□□□ -0.27
BRAT1-206ENST00000493232 SUPT4H1P63272 117 aaKnown RBP13.36□□□□□ -0.27
BRAT1-206ENST00000493232 MGST2Q99735 147 aa13.36□□□□□ -0.27
BRAT1-206ENST00000493232 SRSF8Q9BRL6 282 aaKnown RBP13.36□□□□□ -0.27
BRAT1-206ENST00000493232 C1QTNF4Q9BXJ3 329 aa13.36□□□□□ -0.27
BRAT1-206ENST00000493232 RALGAPA1Q6GYQ0 2036 aa13.36□□□□□ -0.27
BRAT1-206ENST00000493232 RTTNQ86VV8 2226 aa13.36□□□□□ -0.27
BRAT1-206ENST00000493232 LINC00587B1AMM8 73 aa13.35□□□□□ -0.27
BRAT1-206ENST00000493232 H3BUT2 72 aa13.35□□□□□ -0.27
BRAT1-206ENST00000493232 Q6P435 159 aa13.35□□□□□ -0.27
BRAT1-206ENST00000493232 Q6ZS49 121 aa13.35□□□□□ -0.27
BRAT1-206ENST00000493232 LYPD1Q8N2G4 141 aa13.35□□□□□ -0.27
BRAT1-206ENST00000493232 FOXL2NBQ6ZUU3 175 aa13.35□□□□□ -0.27
BRAT1-206ENST00000493232 OR2K2Q8NGT1 345 aa13.35□□□□□ -0.27
BRAT1-206ENST00000493232 MDC1Q14676 2089 aaKnown RBP13.35□□□□□ -0.27
BRAT1-206ENST00000493232 DOCK6Q96HP0 2047 aa13.35□□□□□ -0.27
BRAT1-206ENST00000493232 TRAV2A0A0B4J234 112 aa13.35□□□□□ -0.27
BRAT1-206ENST00000493232 TMEM8BA6NDV4 472 aa13.35□□□□□ -0.27
BRAT1-206ENST00000493232 FOXL1Q12952 345 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms