RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 CITO14578 2027 aa0.53□□□□□ -2.32
PRPF4B-207ENST00000490399 COL1A1P02452 1464 aaPredicted RBP0.53□□□□□ -2.33
PRPF4B-207ENST00000490399 KMT2CQ8NEZ4 4911 aaKnown RBP0.53□□□□□ -2.33
PRPF4B-207ENST00000490399 RYR1P21817 5038 aa0.53□□□□□ -2.33
PRPF4B-207ENST00000490399 SYNE2Q8WXH0 6885 aaKnown RBP0.52□□□□□ -2.33
PRPF4B-207ENST00000490399 C7orf71A4D174 169 aa0.52□□□□□ -2.33
PRPF4B-207ENST00000490399 KPNA3O00505 521 aaPredicted RBP0.52□□□□□ -2.33
PRPF4B-207ENST00000490399 NIPSNAP2O75323 286 aa0.52□□□□□ -2.33
PRPF4B-207ENST00000490399 RHOBP62745 196 aa0.52□□□□□ -2.33
PRPF4B-207ENST00000490399 PTRHD1Q6GMV3 140 aaKnown RBP0.52□□□□□ -2.33
PRPF4B-207ENST00000490399 GDPD1Q8N9F7 314 aa0.52□□□□□ -2.33
PRPF4B-207ENST00000490399 UCK1Q9HA47 277 aa0.52□□□□□ -2.33
PRPF4B-207ENST00000490399 MYO3BQ8WXR4 1341 aa0.52□□□□□ -2.33
PRPF4B-207ENST00000490399 ARHGEF28Q8N1W1 1705 aaKnown RBP0.52□□□□□ -2.33
PRPF4B-207ENST00000490399 TET1Q8NFU7 2136 aa0.52□□□□□ -2.33
PRPF4B-207ENST00000490399 KMT2DO14686 5537 aa0.51□□□□□ -2.33
PRPF4B-207ENST00000490399 SMIM23A6NLE4 172 aa0.51□□□□□ -2.33
PRPF4B-207ENST00000490399 GADD45GO95257 159 aa0.51□□□□□ -2.33
PRPF4B-207ENST00000490399 ANP32AP39687 249 aaKnown RBP0.51□□□□□ -2.33
PRPF4B-207ENST00000490399 EFNA4P52798 201 aa0.51□□□□□ -2.33
PRPF4B-207ENST00000490399 ITGB3BPQ13352 177 aaPredicted RBP0.51□□□□□ -2.33
PRPF4B-207ENST00000490399 LCA10Q71F78 164 aa0.51□□□□□ -2.33
PRPF4B-207ENST00000490399 OR2T10Q8NGZ9 312 aa0.51□□□□□ -2.33
PRPF4B-207ENST00000490399 SLC25A40Q8TBP6 338 aa0.51□□□□□ -2.33
PRPF4B-207ENST00000490399 PATE1Q8WXA2 126 aa0.51□□□□□ -2.33
PRPF4B-207ENST00000490399 BORCS7Q96B45 105 aa0.51□□□□□ -2.33
PRPF4B-207ENST00000490399 SLAMF6Q96DU3 332 aa0.51□□□□□ -2.33
PRPF4B-207ENST00000490399 TMEM70Q9BUB7 260 aa0.51□□□□□ -2.33
PRPF4B-207ENST00000490399 ASH1LQ9NR48 2969 aaKnown RBP0.51□□□□□ -2.33
PRPF4B-207ENST00000490399 FBXO5Q9UKT4 447 aa0.51□□□□□ -2.33
PRPF4B-207ENST00000490399 PRELID3BQ9Y3B1 194 aa0.51□□□□□ -2.33
PRPF4B-207ENST00000490399 RIMBP3CA6NJZ7 1639 aa0.5□□□□□ -2.33
PRPF4B-207ENST00000490399 RIMBP3BA6NNM3 1639 aa0.5□□□□□ -2.33
PRPF4B-207ENST00000490399 RIMBP3Q9UFD9 1639 aa0.5□□□□□ -2.33
PRPF4B-207ENST00000490399 CYB5BO43169 146 aa0.5□□□□□ -2.33
PRPF4B-207ENST00000490399 KLF7O75840 302 aaPredicted RBP0.5□□□□□ -2.33
PRPF4B-207ENST00000490399 SERPINE1P05121 402 aa0.5□□□□□ -2.33
PRPF4B-207ENST00000490399 SRIP30626 198 aa0.5□□□□□ -2.33
PRPF4B-207ENST00000490399 RANP62826 216 aaKnown RBP0.5□□□□□ -2.33
PRPF4B-207ENST00000490399 DYNLT1P63172 113 aa0.5□□□□□ -2.33
PRPF4B-207ENST00000490399 PSG9Q00887 426 aa0.5□□□□□ -2.33
PRPF4B-207ENST00000490399 AESQ08117 197 aa0.5□□□□□ -2.33
PRPF4B-207ENST00000490399 IAH1Q2TAA2 248 aaPredicted RBP0.5□□□□□ -2.33
PRPF4B-207ENST00000490399 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
PRPF4B-207ENST00000490399 FAM74A1Q5RGS3 127 aa0.5□□□□□ -2.33
PRPF4B-207ENST00000490399 Q8IYB0 196 aa0.5□□□□□ -2.33
PRPF4B-207ENST00000490399 TEX47Q8TBZ9 253 aa0.5□□□□□ -2.33
PRPF4B-207ENST00000490399 C4orf3Q8WVX3 66 aa0.5□□□□□ -2.33
PRPF4B-207ENST00000490399 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.5□□□□□ -2.33
PRPF4B-207ENST00000490399 TAS2R7Q9NYW3 318 aa0.5□□□□□ -2.33
PRPF4B-207ENST00000490399 TTC28Q96AY4 2481 aa0.49□□□□□ -2.33
PRPF4B-207ENST00000490399 SMIM9A6NGZ8 99 aa0.49□□□□□ -2.33
PRPF4B-207ENST00000490399 CCL16O15467 120 aa0.49□□□□□ -2.33
PRPF4B-207ENST00000490399 PPIBP23284 216 aaKnown RBP0.49□□□□□ -2.33
PRPF4B-207ENST00000490399 OR6V1Q8N148 313 aa0.49□□□□□ -2.33
PRPF4B-207ENST00000490399 OTUD6BQ8N6M0 293 aa0.49□□□□□ -2.33
PRPF4B-207ENST00000490399 C2orf50Q96LR7 162 aa0.49□□□□□ -2.33
PRPF4B-207ENST00000490399 PRADC1Q9BSG0 188 aa0.49□□□□□ -2.33
PRPF4B-207ENST00000490399 TLNRD1Q9H1K6 362 aa0.49□□□□□ -2.33
PRPF4B-207ENST00000490399 C14orf132Q9NPU4 83 aa0.49□□□□□ -2.33
PRPF4B-207ENST00000490399 NOSIPQ9Y314 301 aaKnown RBP0.49□□□□□ -2.33
PRPF4B-207ENST00000490399 KIF1BO60333 1816 aa0.49□□□□□ -2.33
PRPF4B-207ENST00000490399 NEBP20929 6669 aa0.49□□□□□ -2.33
PRPF4B-207ENST00000490399 BPTFQ12830 3046 aa0.48□□□□□ -2.33
PRPF4B-207ENST00000490399 RYR2Q92736 4967 aa0.48□□□□□ -2.33
PRPF4B-207ENST00000490399 PIK3C2GO75747 1445 aa0.48□□□□□ -2.33
PRPF4B-207ENST00000490399 ZFYVE9O95405 1425 aa0.48□□□□□ -2.33
PRPF4B-207ENST00000490399 TRBV6-4A0A1B0GX49 114 aa0.48□□□□□ -2.33
PRPF4B-207ENST00000490399 RPP14O95059 124 aaKnown RBP0.48□□□□□ -2.33
PRPF4B-207ENST00000490399 TCRBP04435 133 aa0.48□□□□□ -2.33
PRPF4B-207ENST00000490399 LSM6P62312 80 aaKnown RBP0.48□□□□□ -2.33
PRPF4B-207ENST00000490399 GKN2Q86XP6 184 aa0.48□□□□□ -2.33
PRPF4B-207ENST00000490399 ST6GALNAC3Q8NDV1 305 aa0.48□□□□□ -2.33
PRPF4B-207ENST00000490399 SLC30A7Q8NEW0 376 aa0.48□□□□□ -2.33
PRPF4B-207ENST00000490399 OR8J2Q8NGG1 315 aa0.48□□□□□ -2.33
PRPF4B-207ENST00000490399 ARL5BQ96KC2 179 aa0.48□□□□□ -2.33
PRPF4B-207ENST00000490399 TRIM4Q9C037 500 aa0.48□□□□□ -2.33
PRPF4B-207ENST00000490399 IDI2-AS1Q9NZ38 188 aa0.48□□□□□ -2.33
PRPF4B-207ENST00000490399 CHCHD2Q9Y6H1 151 aaPredicted RBP0.48□□□□□ -2.33
PRPF4B-207ENST00000490399 STAB1Q9NY15 2570 aa0.48□□□□□ -2.33
PRPF4B-207ENST00000490399 FAT4Q6V0I7 4981 aa0.47□□□□□ -2.33
PRPF4B-207ENST00000490399 FANCMQ8IYD8 2048 aa0.47□□□□□ -2.33
PRPF4B-207ENST00000490399 PDE6DO43924 150 aa0.47□□□□□ -2.33
PRPF4B-207ENST00000490399 C8GP07360 202 aa0.47□□□□□ -2.33
PRPF4B-207ENST00000490399 RNASE4P34096 147 aaKnown RBP0.47□□□□□ -2.33
PRPF4B-207ENST00000490399 CEBPGP53567 150 aa0.47□□□□□ -2.33
PRPF4B-207ENST00000490399 Q6Q795 121 aa0.47□□□□□ -2.33
PRPF4B-207ENST00000490399 LINC00322Q6ZN03 302 aaPredicted RBP0.47□□□□□ -2.33
PRPF4B-207ENST00000490399 MNS1Q8NEH6 495 aa0.47□□□□□ -2.33
PRPF4B-207ENST00000490399 OR52L1Q8NGH7 329 aa0.47□□□□□ -2.33
PRPF4B-207ENST00000490399 OR51A2Q8NGJ7 313 aa0.47□□□□□ -2.33
PRPF4B-207ENST00000490399 OR2T35Q8NGX2 323 aa0.47□□□□□ -2.33
PRPF4B-207ENST00000490399 STAG3L4Q8TBR4 150 aa0.47□□□□□ -2.33
PRPF4B-207ENST00000490399 FAM172AQ8WUF8 416 aa0.47□□□□□ -2.33
PRPF4B-207ENST00000490399 TVP23BQ9NYZ1 205 aa0.47□□□□□ -2.33
PRPF4B-207ENST00000490399 TMEM14CQ9P0S9 112 aa0.47□□□□□ -2.33
PRPF4B-207ENST00000490399 MUC5ACP98088 5654 aa0.47□□□□□ -2.33
PRPF4B-207ENST00000490399 MDN1Q9NU22 5596 aa0.47□□□□□ -2.33
PRPF4B-207ENST00000490399 FREM3P0C091 2139 aa0.47□□□□□ -2.33
PRPF4B-207ENST00000490399 SPTBP11277 2137 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms