RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 TEX261Q6UWH6 196 aa0.8□□□□□ -2.28
CD46-216ENST00000490278 SOSTDC1Q6X4U4 206 aa0.8□□□□□ -2.28
CD46-216ENST00000490278 KIFC1Q9BW19 673 aa0.8□□□□□ -2.28
CD46-216ENST00000490278 TLNRD1Q9H1K6 362 aa0.8□□□□□ -2.28
CD46-216ENST00000490278 TMEM133Q9H2Q1 129 aa0.8□□□□□ -2.28
CD46-216ENST00000490278 BCL2L10Q9HD36 194 aa0.8□□□□□ -2.28
CD46-216ENST00000490278 C14orf132Q9NPU4 83 aa0.8□□□□□ -2.28
CD46-216ENST00000490278 CDC42SE1Q9NRR8 79 aa0.8□□□□□ -2.28
CD46-216ENST00000490278 U3KQ87 197 aa0.8□□□□□ -2.28
CD46-216ENST00000490278 PLXND1Q9Y4D7 1925 aa0.79□□□□□ -2.28
CD46-216ENST00000490278 CLDN25C9JDP6 229 aa0.79□□□□□ -2.28
CD46-216ENST00000490278 OR7C1O76099 320 aaPredicted RBP0.79□□□□□ -2.28
CD46-216ENST00000490278 EIF5AP63241 154 aaKnown RBP0.79□□□□□ -2.28
CD46-216ENST00000490278 MPV17LQ2QL34 196 aa0.79□□□□□ -2.28
CD46-216ENST00000490278 LYRM7Q5U5X0 104 aa0.79□□□□□ -2.28
CD46-216ENST00000490278 CLECL1Q8IZS7 167 aa0.79□□□□□ -2.28
CD46-216ENST00000490278 SLAMF6Q96DU3 332 aa0.79□□□□□ -2.28
CD46-216ENST00000490278 BTF3L4Q96K17 158 aa0.79□□□□□ -2.28
CD46-216ENST00000490278 SIGMAR1Q99720 223 aa0.79□□□□□ -2.28
CD46-216ENST00000490278 NMNAT1Q9HAN9 279 aaPredicted RBP0.79□□□□□ -2.28
CD46-216ENST00000490278 ERP29P30040 261 aaKnown RBP0.78□□□□□ -2.28
CD46-216ENST00000490278 SRP14P37108 136 aaKnown RBP0.78□□□□□ -2.28
CD46-216ENST00000490278 DYNLT1P63172 113 aa0.78□□□□□ -2.28
CD46-216ENST00000490278 SLC30A7Q8NEW0 376 aa0.78□□□□□ -2.28
CD46-216ENST00000490278 GNPDA2Q8TDQ7 276 aa0.78□□□□□ -2.28
CD46-216ENST00000490278 PRADC1Q9BSG0 188 aa0.78□□□□□ -2.28
CD46-216ENST00000490278 PARVBQ9HBI1 364 aa0.78□□□□□ -2.28
CD46-216ENST00000490278 TAF1LQ8IZX4 1826 aa0.78□□□□□ -2.29
CD46-216ENST00000490278 DENND4CQ5VZ89 1909 aa0.77□□□□□ -2.29
CD46-216ENST00000490278 CEP192Q8TEP8 1941 aa0.77□□□□□ -2.29
CD46-216ENST00000490278 TRAV4A0A0B4J268 109 aa0.77□□□□□ -2.29
CD46-216ENST00000490278 GADD45GO95257 159 aa0.77□□□□□ -2.29
CD46-216ENST00000490278 ZNF25P17030 456 aaPredicted RBP0.77□□□□□ -2.29
CD46-216ENST00000490278 RNASE4P34096 147 aaKnown RBP0.77□□□□□ -2.29
CD46-216ENST00000490278 PIGPP57054 158 aa0.77□□□□□ -2.29
CD46-216ENST00000490278 LIN52Q52LA3 116 aa0.77□□□□□ -2.29
CD46-216ENST00000490278 KRTAP5-10Q6L8G5 202 aa0.77□□□□□ -2.29
CD46-216ENST00000490278 OR11H6Q8NGC7 330 aa0.77□□□□□ -2.29
CD46-216ENST00000490278 LAMB4A4D0S4 1761 aa0.76□□□□□ -2.29
CD46-216ENST00000490278 RIMBP3CA6NJZ7 1639 aa0.76□□□□□ -2.29
CD46-216ENST00000490278 RIMBP3BA6NNM3 1639 aa0.76□□□□□ -2.29
CD46-216ENST00000490278 RIMBP3Q9UFD9 1639 aa0.76□□□□□ -2.29
CD46-216ENST00000490278 FMN1Q68DA7 1419 aa0.76□□□□□ -2.29
CD46-216ENST00000490278 CTXN2P0C2S0 81 aa0.76□□□□□ -2.29
CD46-216ENST00000490278 ERVS71-1P61550 626 aa0.76□□□□□ -2.29
CD46-216ENST00000490278 KRR1Q13601 381 aaKnown RBP0.76□□□□□ -2.29
CD46-216ENST00000490278 AKIRIN2Q53H80 203 aa0.76□□□□□ -2.29
CD46-216ENST00000490278 Q8IYB0 196 aa0.76□□□□□ -2.29
CD46-216ENST00000490278 TMEM254Q8TBM7 123 aa0.76□□□□□ -2.29
CD46-216ENST00000490278 TNRC6AQ8NDV7 1962 aaKnown RBP0.76□□□□□ -2.29
CD46-216ENST00000490278 SCN10AQ9Y5Y9 1956 aa0.76□□□□□ -2.29
CD46-216ENST00000490278 TRBV19A0A075B6N1 114 aa0.75□□□□□ -2.29
CD46-216ENST00000490278 E2F6O75461 281 aa0.75□□□□□ -2.29
CD46-216ENST00000490278 DHFRP00374 187 aa0.75□□□□□ -2.29
CD46-216ENST00000490278 SERPINB9P50453 376 aa0.75□□□□□ -2.29
CD46-216ENST00000490278 FADDQ13158 208 aa0.75□□□□□ -2.29
CD46-216ENST00000490278 RRN3P1Q2M238 152 aa0.75□□□□□ -2.29
CD46-216ENST00000490278 FAM74A1Q5RGS3 127 aa0.75□□□□□ -2.29
CD46-216ENST00000490278 OR2T35Q8NGX2 323 aa0.75□□□□□ -2.29
CD46-216ENST00000490278 STAG3L4Q8TBR4 150 aa0.75□□□□□ -2.29
CD46-216ENST00000490278 BORCS5Q969J3 196 aa0.75□□□□□ -2.29
CD46-216ENST00000490278 YPEL2Q96QA6 119 aa0.75□□□□□ -2.29
CD46-216ENST00000490278 AMELYQ99218 206 aa0.75□□□□□ -2.29
CD46-216ENST00000490278 LINC00467Q9BRT7 94 aa0.75□□□□□ -2.29
CD46-216ENST00000490278 ARHGEF28Q8N1W1 1705 aaKnown RBP0.75□□□□□ -2.29
CD46-216ENST00000490278 TRGV10A0A0A0MS01 117 aa0.74□□□□□ -2.29
CD46-216ENST00000490278 FAM159BA6NKW6 160 aa0.74□□□□□ -2.29
CD46-216ENST00000490278 TIMM17BO60830 172 aa0.74□□□□□ -2.29
CD46-216ENST00000490278 S100A6P06703 90 aa0.74□□□□□ -2.29
CD46-216ENST00000490278 C22orf39Q6P5X5 142 aa0.74□□□□□ -2.29
CD46-216ENST00000490278 PDZD9Q8IXQ8 264 aa0.74□□□□□ -2.29
CD46-216ENST00000490278 ST6GALNAC3Q8NDV1 305 aa0.74□□□□□ -2.29
CD46-216ENST00000490278 PATE1Q8WXA2 126 aa0.74□□□□□ -2.29
CD46-216ENST00000490278 GPER1Q99527 375 aa0.74□□□□□ -2.29
CD46-216ENST00000490278 TMEM126AQ9H061 195 aa0.74□□□□□ -2.29
CD46-216ENST00000490278 ENY2Q9NPA8 101 aa0.74□□□□□ -2.29
CD46-216ENST00000490278 FAM32AQ9Y421 112 aaKnown RBP0.74□□□□□ -2.29
CD46-216ENST00000490278 CHCHD2Q9Y6H1 151 aaPredicted RBP0.74□□□□□ -2.29
CD46-216ENST00000490278 NOTCH1P46531 2555 aa0.74□□□□□ -2.29
CD46-216ENST00000490278 SCN3AQ9NY46 2000 aa0.73□□□□□ -2.29
CD46-216ENST00000490278 TRBV6-4A0A1B0GX49 114 aa0.73□□□□□ -2.29
CD46-216ENST00000490278 TCRBV4S1A1TA0A5B7 111 aa0.73□□□□□ -2.29
CD46-216ENST00000490278 CCL25O15444 150 aa0.73□□□□□ -2.29
CD46-216ENST00000490278 CCL16O15467 120 aa0.73□□□□□ -2.29
CD46-216ENST00000490278 NDUFB3O43676 98 aa0.73□□□□□ -2.29
CD46-216ENST00000490278 DNAL4O96015 105 aa0.73□□□□□ -2.29
CD46-216ENST00000490278 PRB4P10163 310 aaPredicted RBP0.73□□□□□ -2.29
CD46-216ENST00000490278 ATP5G3P48201 142 aa0.73□□□□□ -2.29
CD46-216ENST00000490278 REEP5Q00765 189 aa0.73□□□□□ -2.29
CD46-216ENST00000490278 IMUPQ9GZP8 106 aa0.73□□□□□ -2.29
CD46-216ENST00000490278 ARL2BPQ9Y2Y0 163 aa0.73□□□□□ -2.29
CD46-216ENST00000490278 MCM3APO60318 1980 aa0.72□□□□□ -2.29
CD46-216ENST00000490278 A8MWV9 139 aa0.72□□□□□ -2.29
CD46-216ENST00000490278 IFNA7P01567 189 aa0.72□□□□□ -2.29
CD46-216ENST00000490278 IFNA6P05013 189 aa0.72□□□□□ -2.29
CD46-216ENST00000490278 CST2P09228 141 aa0.72□□□□□ -2.29
CD46-216ENST00000490278 SPRNQ5BIV9 151 aa0.72□□□□□ -2.29
CD46-216ENST00000490278 BCL2L15Q5TBC7 163 aa0.72□□□□□ -2.29
CD46-216ENST00000490278 GOLT1AQ6ZVE7 132 aa0.72□□□□□ -2.29
CD46-216ENST00000490278 OR10X1Q8NGY0 326 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms