RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 PYYP10082 97 aa11.91□□□□□ -0.5
COL9A1-208ENST00000489611 ARF6P62330 175 aa11.91□□□□□ -0.5
COL9A1-208ENST00000489611 GBGT1Q8N5D6 347 aa11.91□□□□□ -0.5
COL9A1-208ENST00000489611 RASL11BQ9BPW5 248 aa11.91□□□□□ -0.5
COL9A1-208ENST00000489611 EPDR1Q9UM22 224 aa11.91□□□□□ -0.5
COL9A1-208ENST00000489611 HIGD1AQ9Y241 93 aa11.91□□□□□ -0.5
COL9A1-208ENST00000489611 KLF12Q9Y4X4 402 aa11.91□□□□□ -0.5
COL9A1-208ENST00000489611 TRAV30A0A087WSZ9 112 aa11.9□□□□□ -0.5
COL9A1-208ENST00000489611 IGLC1P0CG04 106 aa11.9□□□□□ -0.5
COL9A1-208ENST00000489611 OR5I1Q13606 314 aa11.9□□□□□ -0.5
COL9A1-208ENST00000489611 C5orf17Q8NAS9 161 aa11.9□□□□□ -0.5
COL9A1-208ENST00000489611 IGHV3-48P01763 117 aa11.9□□□□□ -0.51
COL9A1-208ENST00000489611 MGST1P10620 155 aaKnown RBP11.9□□□□□ -0.51
COL9A1-208ENST00000489611 UBE2G1P62253 170 aa11.9□□□□□ -0.51
COL9A1-208ENST00000489611 BAGE2Q86Y30 109 aa11.9□□□□□ -0.51
COL9A1-208ENST00000489611 WNT10AQ9GZT5 417 aa11.9□□□□□ -0.51
COL9A1-208ENST00000489611 MRPL18Q9H0U6 180 aaKnown RBP11.9□□□□□ -0.51
COL9A1-208ENST00000489611 A0A1W2PPR1 153 aa11.89□□□□□ -0.51
COL9A1-208ENST00000489611 LINC00587B1AMM8 73 aa11.89□□□□□ -0.51
COL9A1-208ENST00000489611 FCN1O00602 326 aa11.89□□□□□ -0.51
COL9A1-208ENST00000489611 HIST1H1EP10412 219 aaKnown RBP11.89□□□□□ -0.51
COL9A1-208ENST00000489611 GP9P14770 177 aa11.89□□□□□ -0.51
COL9A1-208ENST00000489611 ADMP35318 185 aa11.89□□□□□ -0.51
COL9A1-208ENST00000489611 OR8I2Q8N0Y5 310 aa11.89□□□□□ -0.51
COL9A1-208ENST00000489611 FMC1Q96HJ9 113 aa11.89□□□□□ -0.51
COL9A1-208ENST00000489611 ZNF48Q96MX3 618 aaPredicted RBP11.89□□□□□ -0.51
COL9A1-208ENST00000489611 ATG101Q9BSB4 218 aa11.89□□□□□ -0.51
COL9A1-208ENST00000489611 SPTBN1Q01082 2364 aaKnown RBP11.89□□□□□ -0.51
COL9A1-208ENST00000489611 TSTD3H0UI37 97 aa11.88□□□□□ -0.51
COL9A1-208ENST00000489611 HLA-DQA1P01909 254 aa11.88□□□□□ -0.51
COL9A1-208ENST00000489611 ESDP10768 282 aa11.88□□□□□ -0.51
COL9A1-208ENST00000489611 DLX1P56177 255 aa11.88□□□□□ -0.51
COL9A1-208ENST00000489611 RANP62826 216 aaKnown RBP11.88□□□□□ -0.51
COL9A1-208ENST00000489611 PAFAH1B2P68402 229 aa11.88□□□□□ -0.51
COL9A1-208ENST00000489611 TMEM68Q96MH6 324 aa11.88□□□□□ -0.51
COL9A1-208ENST00000489611 RNASE7Q9H1E1 156 aaKnown RBP11.88□□□□□ -0.51
COL9A1-208ENST00000489611 A6NNC1 897 aa11.88□□□□□ -0.51
COL9A1-208ENST00000489611 NPIPB5A8MRT5 1133 aa11.88□□□□□ -0.51
COL9A1-208ENST00000489611 ZNF705GA8MUZ8 300 aaPredicted RBP11.88□□□□□ -0.51
COL9A1-208ENST00000489611 SCGB2A1O75556 95 aa11.88□□□□□ -0.51
COL9A1-208ENST00000489611 SLC25A5P05141 298 aaKnown RBP11.88□□□□□ -0.51
COL9A1-208ENST00000489611 PSG1P11464 419 aa11.88□□□□□ -0.51
COL9A1-208ENST00000489611 CRISP2P16562 243 aa11.88□□□□□ -0.51
COL9A1-208ENST00000489611 PKIAP61925 76 aa11.88□□□□□ -0.51
COL9A1-208ENST00000489611 Q0VG73 95 aa11.88□□□□□ -0.51
COL9A1-208ENST00000489611 EBI3Q14213 229 aa11.88□□□□□ -0.51
COL9A1-208ENST00000489611 FXYD3Q14802 87 aa11.88□□□□□ -0.51
COL9A1-208ENST00000489611 C5orf64Q2M2E5 130 aa11.88□□□□□ -0.51
COL9A1-208ENST00000489611 ZNF562Q6V9R5 426 aa11.88□□□□□ -0.51
COL9A1-208ENST00000489611 PRDM13Q9H4Q3 707 aa11.88□□□□□ -0.51
COL9A1-208ENST00000489611 TBL2Q9Y4P3 447 aaKnown RBP11.88□□□□□ -0.51
COL9A1-208ENST00000489611 IZUMO1RA6ND01 250 aa11.87□□□□□ -0.51
COL9A1-208ENST00000489611 SNURFLB1AK76 121 aa11.87□□□□□ -0.51
COL9A1-208ENST00000489611 RD3LP0DJH9 198 aa11.87□□□□□ -0.51
COL9A1-208ENST00000489611 WIPF2Q8TF74 440 aaPredicted RBP11.87□□□□□ -0.51
COL9A1-208ENST00000489611 GPR82Q96P67 336 aa11.87□□□□□ -0.51
COL9A1-208ENST00000489611 THYN1Q9P016 225 aa11.87□□□□□ -0.51
COL9A1-208ENST00000489611 MRPL27Q9P0M9 148 aaKnown RBP11.87□□□□□ -0.51
COL9A1-208ENST00000489611 HILPDAQ9Y5L2 63 aa11.87□□□□□ -0.51
COL9A1-208ENST00000489611 PGPA6NDG6 321 aa11.86□□□□□ -0.51
COL9A1-208ENST00000489611 GATCO43716 136 aaKnown RBP11.86□□□□□ -0.51
COL9A1-208ENST00000489611 LY6HO94772 140 aa11.86□□□□□ -0.51
COL9A1-208ENST00000489611 AMY1AP04745 511 aa11.86□□□□□ -0.51
COL9A1-208ENST00000489611 GZMBP10144 247 aa11.86□□□□□ -0.51
COL9A1-208ENST00000489611 CBLN1P23435 193 aa11.86□□□□□ -0.51
COL9A1-208ENST00000489611 IER3P46695 156 aa11.86□□□□□ -0.51
COL9A1-208ENST00000489611 EFNA4P52798 201 aa11.86□□□□□ -0.51
COL9A1-208ENST00000489611 LDLRAD2Q5SZI1 272 aa11.86□□□□□ -0.51
COL9A1-208ENST00000489611 LYPD1Q8N2G4 141 aa11.86□□□□□ -0.51
COL9A1-208ENST00000489611 GRAMD2BQ96HH9 432 aa11.86□□□□□ -0.51
COL9A1-208ENST00000489611 OTORQ9NRC9 128 aa11.86□□□□□ -0.51
COL9A1-208ENST00000489611 SERTAD4Q9NUC0 356 aa11.86□□□□□ -0.51
COL9A1-208ENST00000489611 K7EIM0 57 aa11.86□□□□□ -0.51
COL9A1-208ENST00000489611 TOMM40O96008 361 aa11.86□□□□□ -0.51
COL9A1-208ENST00000489611 HES1Q14469 280 aa11.86□□□□□ -0.51
COL9A1-208ENST00000489611 IQCJQ1A5X6 159 aa11.86□□□□□ -0.51
COL9A1-208ENST00000489611 CT83Q5H943 113 aa11.86□□□□□ -0.51
COL9A1-208ENST00000489611 OR10J3Q5JRS4 329 aa11.86□□□□□ -0.51
COL9A1-208ENST00000489611 VMO1Q7Z5L0 202 aa11.86□□□□□ -0.51
COL9A1-208ENST00000489611 SLC25A39Q9BZJ4 359 aaPredicted RBP11.86□□□□□ -0.51
COL9A1-208ENST00000489611 NAT8BQ9UHF3 227 aa11.86□□□□□ -0.51
COL9A1-208ENST00000489611 PLXNB1O43157 2135 aa11.85□□□□□ -0.51
COL9A1-208ENST00000489611 GOSR1O95249 250 aa11.85□□□□□ -0.51
COL9A1-208ENST00000489611 APELAP0DMC3 54 aa11.85□□□□□ -0.51
COL9A1-208ENST00000489611 S100A7P31151 101 aa11.85□□□□□ -0.51
COL9A1-208ENST00000489611 LYZP61626 148 aa11.85□□□□□ -0.51
COL9A1-208ENST00000489611 USF2Q15853 346 aaPredicted RBP11.85□□□□□ -0.51
COL9A1-208ENST00000489611 ZNF600Q6ZNG1 722 aa11.85□□□□□ -0.51
COL9A1-208ENST00000489611 BPIFA4PQ86YQ2 179 aa11.85□□□□□ -0.51
COL9A1-208ENST00000489611 CMTM2Q8TAZ6 248 aa11.85□□□□□ -0.51
COL9A1-208ENST00000489611 IGFBPL1Q8WX77 278 aa11.85□□□□□ -0.51
COL9A1-208ENST00000489611 MBD6Q96DN6 1003 aa11.85□□□□□ -0.51
COL9A1-208ENST00000489611 ZNF331Q9NQX6 463 aaPredicted RBP11.85□□□□□ -0.51
COL9A1-208ENST00000489611 C1RLQ9NZP8 487 aa11.85□□□□□ -0.51
COL9A1-208ENST00000489611 ABCA4P78363 2273 aa11.85□□□□□ -0.51
COL9A1-208ENST00000489611 TRBV6-1A0A0K0K1D8 114 aa11.84□□□□□ -0.51
COL9A1-208ENST00000489611 IGKV1-17P01599 117 aa11.84□□□□□ -0.51
COL9A1-208ENST00000489611 TPPP2P59282 170 aa11.84□□□□□ -0.51
COL9A1-208ENST00000489611 PRB3Q04118 309 aaPredicted RBP11.84□□□□□ -0.51
COL9A1-208ENST00000489611 SRSF1Q07955 248 aaKnown RBP eCLIP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms