RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 A0A0G2JLM5 398 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 C15orf61A6NNL5 157 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 TAAR5O14804 337 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 BCL2L11O43521 198 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 TRGV3P03979 118 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 OR9G9P0C7N8 305 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 APELAP0DMC3 54 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 DEFA4P12838 97 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 PVALBP20472 110 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 PSMB8P28062 276 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 RAB9AP51151 201 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 TPPP2P59282 170 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 RPL23AP62750 156 aaKnown RBP6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 IL15RAQ13261 267 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 EXOSC2Q13868 293 aaKnown RBP6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 C10orf55Q5SWW7 151 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 HSD17B13Q7Z5P4 300 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 KLHL30-AS1Q8NEE0 82 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 OR5B3Q8NH48 314 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 RBPMSQ93062 196 aaKnown RBP6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 PHYHIPLQ96FC7 376 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 AQP10Q96PS8 301 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 HINT2Q9BX68 163 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 C1QTNF4Q9BXJ3 329 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 ZC4H2Q9NQZ6 224 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 CACFD1Q9UGQ2 172 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 NSG2Q9Y328 171 aa6.2□□□□□ -1.42
TRAPPC12-221ENST00000489032 TRAV3A0A0B4J244 114 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 TEX50A0A1B0GTY4 177 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 E5RGE8 158 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 ST8SIA3O43173 380 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 DEDDO75618 318 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 IFNA17P01571 189 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 IGKV1-39P01597 117 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 IGKV1-5P01602 117 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 IGKV1D-39P04432 117 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 SLC25A6P12236 298 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 CDX1P47902 265 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 OR2B8PP59922 312 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 MRGPRG-AS1Q2M3A8 158 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 TCTEX1D4Q5JR98 221 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 CLLU1Q5K131 121 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 EIF5AL1Q6IS14 154 aaKnown RBP6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 LYZL2Q7Z4W2 148 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 SELENOHQ8IZQ5 122 aaKnown RBP6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 TTC9CQ8N5M4 171 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 SLC35G3Q8N808 338 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 LSM10Q969L4 123 aaKnown RBP6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 UBE2E2Q96LR5 201 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 MS4A10Q96PG2 267 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 RNF126Q9BV68 326 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 ENY2Q9NPA8 101 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 ZNF257Q9Y2Q1 563 aa6.19□□□□□ -1.42
TRAPPC12-221ENST00000489032 IGHV4OR15-8A0A075B7B6 117 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 A0A1B0GU03 582 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 RNF222A6NCQ9 220 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 MPTX1A8MV57 137 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 K7EPK0 472 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 SOX15O60248 233 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 BRI3O95415 125 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 TPT1P13693 172 aaKnown RBP6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 MYOD1P15172 320 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 HIST1H1BP16401 226 aaKnown RBP6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 P2RY1P47900 373 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 HSPE1P61604 102 aaKnown RBP6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 ERHP84090 104 aaKnown RBP6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 SPSB3Q6PJ21 355 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 ZNF429Q86V71 674 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 SLC7A5P1Q8MH63 180 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 ZNF491Q8N8L2 437 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 OR1L6Q8NGR2 347 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 OR1S1Q8NH92 325 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 LRRC20Q8TCA0 184 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 C4orf3Q8WVX3 66 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 USMG5Q96IX5 58 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 ZNF471Q9BX82 626 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 PLEKHA3Q9HB20 300 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 TMEM14BQ9NUH8 114 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 THYN1Q9P016 225 aa6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 LSM5Q9Y4Y9 91 aaKnown RBP6.18□□□□□ -1.42
TRAPPC12-221ENST00000489032 LINC00862A6NCI5 91 aa6.17□□□□□ -1.42
TRAPPC12-221ENST00000489032 FAM223BA6NKX1 122 aa6.17□□□□□ -1.42
TRAPPC12-221ENST00000489032 CRYGCP07315 174 aa6.17□□□□□ -1.42
TRAPPC12-221ENST00000489032 OR13C7P0DN81 318 aa6.17□□□□□ -1.42
TRAPPC12-221ENST00000489032 VPREB1P12018 145 aa6.17□□□□□ -1.42
TRAPPC12-221ENST00000489032 RPL12P30050 165 aaKnown RBP6.17□□□□□ -1.42
TRAPPC12-221ENST00000489032 MYCNOSP40205 109 aa6.17□□□□□ -1.42
TRAPPC12-221ENST00000489032 NKX2-1P43699 371 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC12-221ENST00000489032 HOXA1P49639 335 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC12-221ENST00000489032 CD81P60033 236 aa6.17□□□□□ -1.42
TRAPPC12-221ENST00000489032 PRCDQ00LT1 54 aa6.17□□□□□ -1.42
TRAPPC12-221ENST00000489032 RELQ04864 619 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC12-221ENST00000489032 ATP5G2Q06055 141 aa6.17□□□□□ -1.42
TRAPPC12-221ENST00000489032 NMSQ5H8A3 153 aa6.17□□□□□ -1.42
TRAPPC12-221ENST00000489032 FAM223AQ8IWN6 122 aa6.17□□□□□ -1.42
TRAPPC12-221ENST00000489032 NECAP1Q8NC96 275 aa6.17□□□□□ -1.42
TRAPPC12-221ENST00000489032 OR4D5Q8NGN0 318 aa6.17□□□□□ -1.42
TRAPPC12-221ENST00000489032 LHFPL5Q8TAF8 219 aa6.17□□□□□ -1.42
TRAPPC12-221ENST00000489032 STOML3Q8TAV4 291 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms