RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 OR4F5Q8NH21 305 aa5.88□□□□□ -1.47
APOBEC3A-203ENST00000488758 FAM213BQ8TBF2 198 aa5.88□□□□□ -1.47
APOBEC3A-203ENST00000488758 ZNF502Q8TBZ5 544 aa5.88□□□□□ -1.47
APOBEC3A-203ENST00000488758 Q8WTZ3 238 aa5.88□□□□□ -1.47
APOBEC3A-203ENST00000488758 SAT2Q96F10 170 aaPredicted RBP5.88□□□□□ -1.47
APOBEC3A-203ENST00000488758 ATP6V0BQ99437 205 aa5.88□□□□□ -1.47
APOBEC3A-203ENST00000488758 C16orf95Q9H693 158 aa5.88□□□□□ -1.47
APOBEC3A-203ENST00000488758 GNB4Q9HAV0 340 aa5.88□□□□□ -1.47
APOBEC3A-203ENST00000488758 SLC39A9Q9NUM3 307 aa5.88□□□□□ -1.47
APOBEC3A-203ENST00000488758 FN1P02751 2386 aaKnown RBP5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 IGKV1D-37A0A075B6S9 117 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 A0A1W2PPV4 95 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 OR2T8A6NH00 312 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 NDUFA7O95182 113 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 IGHV3-11P01762 117 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 LINC00869P0C866 280 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 PSG1P11464 419 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 M6PRP20645 277 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 GPR183P32249 361 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 YPEL3P61236 119 aaPredicted RBP5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 TMEM41BQ5BJD5 291 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 FAM209BQ5JX69 171 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 FAM122CQ6P4D5 195 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 C10orf99Q6UWK7 81 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 LCNL1Q6ZST4 164 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 KLHDC1Q8N7A1 406 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 OR5AU1Q8NGC0 362 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 OR4X2Q8NGF9 303 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 OR1L4Q8NGR5 311 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 LINC01006Q8NI28 216 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 ACTR3CQ9C0K3 210 aaPredicted RBP5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 VSIRQ9H7M9 311 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 RPRMQ9NS64 109 aa5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 NSD1Q96L73 2696 aaPredicted RBP5.87□□□□□ -1.47
APOBEC3A-203ENST00000488758 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 CLPSL1A2RUU4 121 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 ANKRD34BA5PLL1 514 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 TEX46H3BTG2 121 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 TGOLN2O43493 480 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 COX7A2P2O60397 106 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 EIF4EBP3O60516 100 aaPredicted RBP5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 HYPMO75409 117 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 YIF1AO95070 293 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 TOMM40O96008 361 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 IGKV1-17P01599 117 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 CTSGP08311 255 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 OR5G3P0C626 314 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 ORM2P19652 201 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 ARL3P36405 182 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 RAB2AP61019 212 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 RELQ04864 619 aaPredicted RBP5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 CLLU1Q5K131 121 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 ZNF343Q6P1L6 599 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 SPSB3Q6PJ21 355 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 ZNF600Q6ZNG1 722 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 ZNF491Q8N8L2 437 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 OR51G1Q8NGK1 321 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 OR1B1Q8NGR6 318 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 GATAD1Q8WUU5 269 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 PCNPQ8WW12 178 aaKnown RBP5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 UBE2E2Q96LR5 201 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 PFDN5Q99471 154 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 RNF2Q99496 336 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 C19orf24Q9BVV8 132 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 DNAJC4Q9NNZ3 241 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 DOK5Q9P104 306 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 PEF1Q9UBV8 284 aaKnown RBP5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 RNF114Q9Y508 228 aa5.86□□□□□ -1.47
APOBEC3A-203ENST00000488758 ANK3Q12955 4377 aaKnown RBP5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 GGCTO75223 188 aaKnown RBP5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 NMBP08949 121 aa5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 S100A7P31151 101 aa5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 CDC34P49427 236 aaPredicted RBP5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 FHITP49789 147 aa5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 PLP1P60201 277 aa5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 LYZP61626 148 aa5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 RHOBP62745 196 aa5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 SRSF2Q01130 221 aaKnown RBP5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 KIAA0141Q14154 515 aaPredicted RBP5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 KHDC1LQ5JSQ8 128 aa5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 PXDC1Q5TGL8 231 aa5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 C10orf113Q5VZT2 155 aa5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 S100A7AQ86SG5 101 aa5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 RPP25LQ8N5L8 163 aaKnown RBP5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 RNF152Q8N8N0 203 aa5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 SPATA3Q8NHX4 192 aa5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 SFT2D1Q8WV19 159 aa5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 CCDC140Q96MF4 163 aa5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 OR5B12Q96R08 314 aa5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 CHRDL1Q9BU40 450 aa5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 PBDC1Q9BVG4 233 aa5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 HRH4Q9H3N8 390 aa5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 PUS1Q9Y606 427 aaKnown RBP eCLIP5.85□□□□□ -1.47
APOBEC3A-203ENST00000488758 IGHV3-35A0A0C4DH35 117 aa5.84□□□□□ -1.47
APOBEC3A-203ENST00000488758 CTXND1A0A1B0GTU2 59 aa5.84□□□□□ -1.47
APOBEC3A-203ENST00000488758 A0A1B0GUS0 222 aa5.84□□□□□ -1.47
APOBEC3A-203ENST00000488758 WI2-2373I1.2A0A1W2PRP0 233 aa5.84□□□□□ -1.47
APOBEC3A-203ENST00000488758 SEC14L6B5MCN3 397 aa5.84□□□□□ -1.47
APOBEC3A-203ENST00000488758 PPP5D1E7EU14 171 aa5.84□□□□□ -1.47
APOBEC3A-203ENST00000488758 OR2C1O95371 312 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms