RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 SPSB3Q6PJ21 355 aa12.66□□□□□ -0.38
PKD1-220ENST00000487932 DLX4Q92988 240 aaPredicted RBP12.66□□□□□ -0.38
PKD1-220ENST00000487932 SSBP2P81877 361 aaPredicted RBP12.66□□□□□ -0.38
PKD1-220ENST00000487932 MSRB2Q9Y3D2 182 aa12.66□□□□□ -0.38
PKD1-220ENST00000487932 DAD1P61803 113 aa12.66□□□□□ -0.38
PKD1-220ENST00000487932 C20orf204Q6ZNR8 217 aa12.66□□□□□ -0.38
PKD1-220ENST00000487932 Q96MF0 132 aa12.66□□□□□ -0.38
PKD1-220ENST00000487932 IGHV3-16A0A0C4DH30 117 aa12.66□□□□□ -0.38
PKD1-220ENST00000487932 RPL23P62829 140 aaKnown RBP12.66□□□□□ -0.38
PKD1-220ENST00000487932 Q8TAT8 98 aa12.66□□□□□ -0.38
PKD1-220ENST00000487932 CKAP5Q14008 2032 aa12.66□□□□□ -0.38
PKD1-220ENST00000487932 IGHV1-3A0A0C4DH29 117 aa12.66□□□□□ -0.38
PKD1-220ENST00000487932 F2Z2F3 143 aa12.66□□□□□ -0.38
PKD1-220ENST00000487932 LYZL4Q96KX0 146 aa12.66□□□□□ -0.38
PKD1-220ENST00000487932 RPUSD1Q9UJJ7 312 aaKnown RBP12.65□□□□□ -0.38
PKD1-220ENST00000487932 FGFBP3Q8TAT2 258 aa12.65□□□□□ -0.38
PKD1-220ENST00000487932 A8MWV9 139 aa12.65□□□□□ -0.39
PKD1-220ENST00000487932 MRPL14Q6P1L8 145 aaKnown RBP12.65□□□□□ -0.39
PKD1-220ENST00000487932 LINC00477Q96M19 166 aa12.65□□□□□ -0.39
PKD1-220ENST00000487932 A0A0G2JNJ9 132 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 A8MXK9 166 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 Q9UFV3 132 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 TRBV6-7A0A0A0MS04 114 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 NAA38Q9BRA0 125 aaKnown RBP12.64□□□□□ -0.39
PKD1-220ENST00000487932 CABIN1Q9Y6J0 2220 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 KNCNA6PVL3 124 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 IGHV1-8P0DP01 117 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 ESDP10768 282 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 CCL20P78556 96 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 Q0VFX4 171 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 DMRT1Q9Y5R6 373 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 EFNB3Q15768 340 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 C14orf178Q8N769 122 aaPredicted RBP12.64□□□□□ -0.39
PKD1-220ENST00000487932 C18orf12Q96KH6 178 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 CSTL1Q9H114 145 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 XCL2Q9UBD3 114 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 LEPROTO15243 131 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 PSG1P11464 419 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 CD59P13987 128 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 MESP1Q9BRJ9 268 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 C1QTNF4Q9BXJ3 329 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 BPESC1Q9GZL8 116 aa12.64□□□□□ -0.39
PKD1-220ENST00000487932 PRDM13Q9H4Q3 707 aa12.63□□□□□ -0.39
PKD1-220ENST00000487932 TRAV8-3A0A0A6YYJ7 113 aa12.63□□□□□ -0.39
PKD1-220ENST00000487932 IFI27L1Q96BM0 104 aa12.63□□□□□ -0.39
PKD1-220ENST00000487932 SPXQ9BT56 116 aa12.63□□□□□ -0.39
PKD1-220ENST00000487932 SNHG12Q9BXW3 62 aa12.63□□□□□ -0.39
PKD1-220ENST00000487932 RTTNQ86VV8 2226 aa12.63□□□□□ -0.39
PKD1-220ENST00000487932 A0A096LPF7 62 aa12.63□□□□□ -0.39
PKD1-220ENST00000487932 MBD3L4A6NDZ8 208 aaPredicted RBP12.63□□□□□ -0.39
PKD1-220ENST00000487932 MBD3L3A6NE82 208 aaPredicted RBP12.63□□□□□ -0.39
PKD1-220ENST00000487932 MBD3L5A6NJ08 208 aaPredicted RBP12.63□□□□□ -0.39
PKD1-220ENST00000487932 TMEM238C9JI98 176 aa12.63□□□□□ -0.39
PKD1-220ENST00000487932 D6R8Y8 96 aa12.63□□□□□ -0.39
PKD1-220ENST00000487932 TBX6O95947 436 aaPredicted RBP12.63□□□□□ -0.39
PKD1-220ENST00000487932 DEFB131AP59861 70 aa12.63□□□□□ -0.39
PKD1-220ENST00000487932 MBD3L2Q8NHZ7 208 aaPredicted RBP12.63□□□□□ -0.39
PKD1-220ENST00000487932 EIF4EBP2Q13542 120 aaPredicted RBP12.63□□□□□ -0.39
PKD1-220ENST00000487932 NKAPP1Q8N9T2 125 aa12.63□□□□□ -0.39
PKD1-220ENST00000487932 MRPS18CQ9Y3D5 142 aaKnown RBP12.63□□□□□ -0.39
PKD1-220ENST00000487932 ESPL1Q14674 2120 aa12.63□□□□□ -0.39
PKD1-220ENST00000487932 PSPNO60542 156 aa12.63□□□□□ -0.39
PKD1-220ENST00000487932 SPTA1P02549 2419 aa12.62□□□□□ -0.39
PKD1-220ENST00000487932 TRBV7-1A0A0A6YYK4 115 aa12.62□□□□□ -0.39
PKD1-220ENST00000487932 DUTP33316 252 aaKnown RBP12.62□□□□□ -0.39
PKD1-220ENST00000487932 IL17RELQ6ZVW7 336 aa12.62□□□□□ -0.39
PKD1-220ENST00000487932 OCIAD2Q56VL3 154 aa12.62□□□□□ -0.39
PKD1-220ENST00000487932 NHLRC3Q5JS37 347 aa12.62□□□□□ -0.39
PKD1-220ENST00000487932 SPATA31B1PQ5VZV4 182 aa12.62□□□□□ -0.39
PKD1-220ENST00000487932 LYZL1Q6UWQ5 148 aa12.62□□□□□ -0.39
PKD1-220ENST00000487932 GAGE12JA6NER3 117 aa12.62□□□□□ -0.39
PKD1-220ENST00000487932 GAGE1Q13065 139 aa12.62□□□□□ -0.39
PKD1-220ENST00000487932 GAGE4Q13068 117 aa12.62□□□□□ -0.39
PKD1-220ENST00000487932 GAGE5Q13069 117 aa12.62□□□□□ -0.39
PKD1-220ENST00000487932 GAGE13Q4V321 117 aa12.62□□□□□ -0.39
PKD1-220ENST00000487932 OCC1Q8TAD7 63 aa12.62□□□□□ -0.39
PKD1-220ENST00000487932 TMEM178BH3BS89 294 aa12.61□□□□□ -0.39
PKD1-220ENST00000487932 COL8A2P25067 703 aa12.61□□□□□ -0.39
PKD1-220ENST00000487932 RBMY1FQ15415 496 aaKnown RBP12.61□□□□□ -0.39
PKD1-220ENST00000487932 SPOCK3Q9BQ16 436 aa12.61□□□□□ -0.39
PKD1-220ENST00000487932 KLF12Q9Y4X4 402 aa12.61□□□□□ -0.39
PKD1-220ENST00000487932 SPTBP11277 2137 aa12.61□□□□□ -0.39
PKD1-220ENST00000487932 ERVH48-1M5A8F1 160 aa12.61□□□□□ -0.39
PKD1-220ENST00000487932 CD200R1LQ6Q8B3 271 aa12.61□□□□□ -0.39
PKD1-220ENST00000487932 FOXG1P55316 489 aaPredicted RBP12.61□□□□□ -0.39
PKD1-220ENST00000487932 TRAV25A0A0B4J276 109 aa12.61□□□□□ -0.39
PKD1-220ENST00000487932 LINC00587B1AMM8 73 aa12.61□□□□□ -0.39
PKD1-220ENST00000487932 SH2D1AO60880 128 aa12.6□□□□□ -0.39
PKD1-220ENST00000487932 TNFRSF6BO95407 300 aa12.6□□□□□ -0.39
PKD1-220ENST00000487932 ZNF479Q96JC4 524 aa12.6□□□□□ -0.39
PKD1-220ENST00000487932 PPBPP02775 128 aa12.6□□□□□ -0.39
PKD1-220ENST00000487932 GAGE2AQ6NT46 116 aa12.6□□□□□ -0.39
PKD1-220ENST00000487932 RHPN1-AS1Q9BWJ2 59 aa12.6□□□□□ -0.39
PKD1-220ENST00000487932 NDUFS5O43920 106 aa12.6□□□□□ -0.39
PKD1-220ENST00000487932 DKK1O94907 266 aa12.6□□□□□ -0.39
PKD1-220ENST00000487932 IFI6P09912 130 aa12.6□□□□□ -0.39
PKD1-220ENST00000487932 PRIMA1Q86XR5 153 aa12.6□□□□□ -0.39
PKD1-220ENST00000487932 ZNF319Q9P2F9 582 aa12.6□□□□□ -0.39
PKD1-220ENST00000487932 RALGAPA1Q6GYQ0 2036 aa12.6□□□□□ -0.39
PKD1-220ENST00000487932 THAP8Q8NA92 274 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms