RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 SNRPD3P62318 126 aaKnown RBP3.82□□□□□ -1.8
COL4A3-206ENST00000487633 MRPS15P82914 257 aaKnown RBP3.82□□□□□ -1.8
COL4A3-206ENST00000487633 IDNKQ5T6J7 187 aa3.82□□□□□ -1.8
COL4A3-206ENST00000487633 LYPD5Q6UWN5 251 aa3.82□□□□□ -1.8
COL4A3-206ENST00000487633 ZNF818PQ6ZRF7 136 aa3.82□□□□□ -1.8
COL4A3-206ENST00000487633 GPR141Q7Z602 305 aa3.82□□□□□ -1.8
COL4A3-206ENST00000487633 NFE4Q86UQ8 179 aa3.82□□□□□ -1.8
COL4A3-206ENST00000487633 OR11H7Q8NGC8 314 aa3.82□□□□□ -1.8
COL4A3-206ENST00000487633 RNASE8Q8TDE3 154 aaKnown RBP3.82□□□□□ -1.8
COL4A3-206ENST00000487633 SECTM1Q8WVN6 248 aa3.82□□□□□ -1.8
COL4A3-206ENST00000487633 FCAMRQ8WWV6 532 aa3.82□□□□□ -1.8
COL4A3-206ENST00000487633 YIPF6Q96EC8 236 aa3.82□□□□□ -1.8
COL4A3-206ENST00000487633 CENPOQ9BU64 300 aa3.82□□□□□ -1.8
COL4A3-206ENST00000487633 FUNDC2Q9BWH2 189 aa3.82□□□□□ -1.8
COL4A3-206ENST00000487633 SLC25A39Q9BZJ4 359 aaPredicted RBP3.82□□□□□ -1.8
COL4A3-206ENST00000487633 ATG5Q9H1Y0 275 aa3.82□□□□□ -1.8
COL4A3-206ENST00000487633 TMEM231Q9H6L2 316 aa3.82□□□□□ -1.8
COL4A3-206ENST00000487633 RAB22AQ9UL26 194 aa3.82□□□□□ -1.8
COL4A3-206ENST00000487633 RS1O15537 224 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 SSX5O60225 188 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 NOL3O60936 208 aaKnown RBP3.81□□□□□ -1.8
COL4A3-206ENST00000487633 CLN5O75503 358 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 IGKV1-39P01597 117 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 IGKV1D-39P04432 117 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 HNRNPCP07910 306 aaKnown RBP eCLIP3.81□□□□□ -1.8
COL4A3-206ENST00000487633 HIST1H1DP16402 221 aaKnown RBP3.81□□□□□ -1.8
COL4A3-206ENST00000487633 TALDO1P37837 337 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 LPAR6P43657 344 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 VBP1P61758 197 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 NCS1P62166 190 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 DHODHQ02127 395 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 GPR107Q5VW38 600 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 SFXN4Q6P4A7 337 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 Q6ZS49 121 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 CROCCP3Q8IVE0 287 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 OR13F1Q8NGS4 319 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 OR10R2Q8NGX6 335 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 LGALS14Q8TCE9 139 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 NUDCD2Q8WVJ2 157 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 TMEM230Q96A57 120 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 RAB3CQ96E17 227 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 SCPEP1Q9HB40 452 aa3.81□□□□□ -1.8
COL4A3-206ENST00000487633 CCDC160A6NGH7 325 aa3.8□□□□□ -1.8
COL4A3-206ENST00000487633 CYB5BO43169 146 aa3.8□□□□□ -1.8
COL4A3-206ENST00000487633 RBFOX2O43251 390 aaKnown RBP eCLIP3.8□□□□□ -1.8
COL4A3-206ENST00000487633 SMIM18P0DKX4 95 aa3.8□□□□□ -1.8
COL4A3-206ENST00000487633 RNASE2P10153 161 aaKnown RBP3.8□□□□□ -1.8
COL4A3-206ENST00000487633 RAB6AP20340 208 aa3.8□□□□□ -1.8
COL4A3-206ENST00000487633 UCP1P25874 307 aa3.8□□□□□ -1.8
COL4A3-206ENST00000487633 TGFBR1P36897 503 aa3.8□□□□□ -1.8
COL4A3-206ENST00000487633 RPS19P39019 145 aaKnown RBP3.8□□□□□ -1.8
COL4A3-206ENST00000487633 RPL5P46777 297 aaKnown RBP3.8□□□□□ -1.8
COL4A3-206ENST00000487633 NPBWR1P48145 328 aa3.8□□□□□ -1.8
COL4A3-206ENST00000487633 CNN1P51911 297 aaKnown RBP3.8□□□□□ -1.8
COL4A3-206ENST00000487633 THOC7Q6I9Y2 204 aaKnown RBP3.8□□□□□ -1.8
COL4A3-206ENST00000487633 Q6ZTI0 123 aa3.8□□□□□ -1.8
COL4A3-206ENST00000487633 HSD17B13Q7Z5P4 300 aaPredicted RBP3.8□□□□□ -1.8
COL4A3-206ENST00000487633 CLVS1Q8IUQ0 354 aaPredicted RBP3.8□□□□□ -1.8
COL4A3-206ENST00000487633 Q8N3U1 123 aa3.8□□□□□ -1.8
COL4A3-206ENST00000487633 LINC01587Q99440 93 aa3.8□□□□□ -1.8
COL4A3-206ENST00000487633 LINC00467Q9BRT7 94 aa3.8□□□□□ -1.8
COL4A3-206ENST00000487633 PARD6GQ9BYG4 376 aaPredicted RBP3.8□□□□□ -1.8
COL4A3-206ENST00000487633 PLEKHA2Q9HB19 425 aa3.8□□□□□ -1.8
COL4A3-206ENST00000487633 SEPSECSQ9HD40 501 aaKnown RBP3.8□□□□□ -1.8
COL4A3-206ENST00000487633 KLK11Q9UBX7 282 aa3.8□□□□□ -1.8
COL4A3-206ENST00000487633 TIMM8BQ9Y5J9 83 aaPredicted RBP3.8□□□□□ -1.8
COL4A3-206ENST00000487633 LY96Q9Y6Y9 160 aa3.8□□□□□ -1.8
COL4A3-206ENST00000487633 TRAV18A0A075B6X5 111 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 SMIM31A0A1B0GVY4 71 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 H3BNG1 76 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 PANO1I0J062 215 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 TMEM127O75204 238 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 SCGNO76038 276 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 IL4P05112 153 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 FGF2P09038 288 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 IGLC1P0CG04 106 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 FCGR2CP31995 323 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 HOXA1P49639 335 aaPredicted RBP3.79□□□□□ -1.8
COL4A3-206ENST00000487633 FXYD4P59646 89 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 PRCDQ00LT1 54 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 ARL6IP1Q15041 203 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 CDNFQ49AH0 187 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 LCE2DQ5TA82 110 aaPredicted RBP3.79□□□□□ -1.8
COL4A3-206ENST00000487633 AADACL3Q5VUY0 350 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 ARRDC1Q8N5I2 433 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 SAMD12Q8N8I0 201 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 OR5H6Q8NGV6 325 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 AP3S1Q92572 193 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 S100A16Q96FQ6 103 aaKnown RBP3.79□□□□□ -1.8
COL4A3-206ENST00000487633 ABHD1Q96SE0 405 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 NAA50Q9GZZ1 169 aaKnown RBP3.79□□□□□ -1.8
COL4A3-206ENST00000487633 Q9HAA7 133 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 DIABLOQ9NR28 239 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 RHBDL2Q9NX52 303 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 DOK5Q9P104 306 aa3.79□□□□□ -1.8
COL4A3-206ENST00000487633 TRAV8-2A0A0B4J237 113 aa3.78□□□□□ -1.8
COL4A3-206ENST00000487633 TMEM235A6NFC5 223 aa3.78□□□□□ -1.8
COL4A3-206ENST00000487633 A6NHS1 94 aa3.78□□□□□ -1.8
COL4A3-206ENST00000487633 FAM25AB3EWG3 89 aa3.78□□□□□ -1.8
COL4A3-206ENST00000487633 FAM25CB3EWG5 89 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms