RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 CRISP2P16562 243 aa14.34□□□□□ -0.11
PDLIM7-207ENST00000486828 DEFA6Q01524 100 aa14.34□□□□□ -0.11
PDLIM7-207ENST00000486828 COX19Q49B96 90 aa14.34□□□□□ -0.11
PDLIM7-207ENST00000486828 TP53TG3Q9ULZ0 132 aa14.34□□□□□ -0.11
PDLIM7-207ENST00000486828 PLXNB1O43157 2135 aa14.33□□□□□ -0.11
PDLIM7-207ENST00000486828 IGHV3-21A0A0B4J1V1 117 aa14.33□□□□□ -0.11
PDLIM7-207ENST00000486828 HYPMO75409 117 aa14.33□□□□□ -0.11
PDLIM7-207ENST00000486828 MT-ND6P03923 174 aa14.33□□□□□ -0.11
PDLIM7-207ENST00000486828 PLP1P60201 277 aa14.33□□□□□ -0.11
PDLIM7-207ENST00000486828 TPTE2P1Q5T6R2 138 aa14.33□□□□□ -0.11
PDLIM7-207ENST00000486828 WDR73Q6P4I2 378 aa14.33□□□□□ -0.11
PDLIM7-207ENST00000486828 NHLRC2Q8NBF2 726 aa14.33□□□□□ -0.11
PDLIM7-207ENST00000486828 TIMD4Q96H15 378 aa14.33□□□□□ -0.11
PDLIM7-207ENST00000486828 PRO1933Q9H354 126 aa14.33□□□□□ -0.11
PDLIM7-207ENST00000486828 CBLN4Q9NTU7 201 aa14.33□□□□□ -0.11
PDLIM7-207ENST00000486828 LY6HO94772 140 aa14.33□□□□□ -0.12
PDLIM7-207ENST00000486828 PAX1P15863 534 aa14.33□□□□□ -0.12
PDLIM7-207ENST00000486828 FAM231DQ6ZW35 169 aa14.33□□□□□ -0.12
PDLIM7-207ENST00000486828 BAGE2Q86Y30 109 aa14.33□□□□□ -0.12
PDLIM7-207ENST00000486828 CMTM2Q8TAZ6 248 aa14.33□□□□□ -0.12
PDLIM7-207ENST00000486828 SRSF8Q9BRL6 282 aaKnown RBP14.33□□□□□ -0.12
PDLIM7-207ENST00000486828 SERTAD4Q9NUC0 356 aa14.33□□□□□ -0.12
PDLIM7-207ENST00000486828 ZNF705GA8MUZ8 300 aaPredicted RBP14.32□□□□□ -0.12
PDLIM7-207ENST00000486828 TIMM23O14925 209 aa14.32□□□□□ -0.12
PDLIM7-207ENST00000486828 ESDP10768 282 aa14.32□□□□□ -0.12
PDLIM7-207ENST00000486828 DDTP30046 118 aa14.32□□□□□ -0.12
PDLIM7-207ENST00000486828 TCL1AP56279 114 aa14.32□□□□□ -0.12
PDLIM7-207ENST00000486828 RANP62826 216 aaKnown RBP14.32□□□□□ -0.12
PDLIM7-207ENST00000486828 PLGLAQ15195 96 aa14.32□□□□□ -0.12
PDLIM7-207ENST00000486828 LDLRAD2Q5SZI1 272 aa14.32□□□□□ -0.12
PDLIM7-207ENST00000486828 OR11H6Q8NGC7 330 aa14.32□□□□□ -0.12
PDLIM7-207ENST00000486828 EPDR1Q9UM22 224 aa14.32□□□□□ -0.12
PDLIM7-207ENST00000486828 TRAV34A0A0B4J273 112 aa14.31□□□□□ -0.12
PDLIM7-207ENST00000486828 HTR1DP28221 377 aa14.31□□□□□ -0.12
PDLIM7-207ENST00000486828 IQCJQ1A5X6 159 aa14.31□□□□□ -0.12
PDLIM7-207ENST00000486828 TMEM183BQ1AE95 376 aa14.31□□□□□ -0.12
PDLIM7-207ENST00000486828 C11orf71Q6IPW1 123 aa14.31□□□□□ -0.12
PDLIM7-207ENST00000486828 TMEM136Q6ZRR5 245 aa14.31□□□□□ -0.12
PDLIM7-207ENST00000486828 SPINK4O60575 86 aa14.31□□□□□ -0.12
PDLIM7-207ENST00000486828 NBEAP1P0C6P0 100 aa14.31□□□□□ -0.12
PDLIM7-207ENST00000486828 GP9P14770 177 aa14.31□□□□□ -0.12
PDLIM7-207ENST00000486828 LINC00310P59036 64 aa14.31□□□□□ -0.12
PDLIM7-207ENST00000486828 Q0VG73 95 aa14.31□□□□□ -0.12
PDLIM7-207ENST00000486828 BLNKQ8WV28 456 aa14.31□□□□□ -0.12
PDLIM7-207ENST00000486828 DPM3Q9P2X0 92 aa14.31□□□□□ -0.12
PDLIM7-207ENST00000486828 NAT8BQ9UHF3 227 aa14.31□□□□□ -0.12
PDLIM7-207ENST00000486828 ZNF462Q96JM2 2506 aa14.3□□□□□ -0.12
PDLIM7-207ENST00000486828 IZUMO1RA6ND01 250 aa14.3□□□□□ -0.12
PDLIM7-207ENST00000486828 I3L2K1 104 aa14.3□□□□□ -0.12
PDLIM7-207ENST00000486828 AMY1AP04745 511 aa14.3□□□□□ -0.12
PDLIM7-207ENST00000486828 SLC25A5P05141 298 aaKnown RBP14.3□□□□□ -0.12
PDLIM7-207ENST00000486828 SNRPCP09234 159 aaKnown RBP14.3□□□□□ -0.12
PDLIM7-207ENST00000486828 IGLC1P0CG04 106 aa14.3□□□□□ -0.12
PDLIM7-207ENST00000486828 ARF6P62330 175 aa14.3□□□□□ -0.12
PDLIM7-207ENST00000486828 GNG5P63218 68 aa14.3□□□□□ -0.12
PDLIM7-207ENST00000486828 ZNF664Q8N3J9 261 aa14.3□□□□□ -0.12
PDLIM7-207ENST00000486828 NEU4Q8WWR8 484 aaPredicted RBP14.3□□□□□ -0.12
PDLIM7-207ENST00000486828 TMEM68Q96MH6 324 aa14.3□□□□□ -0.12
PDLIM7-207ENST00000486828 GSX1Q9H4S2 264 aaPredicted RBP14.3□□□□□ -0.12
PDLIM7-207ENST00000486828 PGPA6NDG6 321 aa14.29□□□□□ -0.12
PDLIM7-207ENST00000486828 M0R1W7 72 aa14.29□□□□□ -0.12
PDLIM7-207ENST00000486828 RAB4BP61018 213 aa14.29□□□□□ -0.12
PDLIM7-207ENST00000486828 UBE2G1P62253 170 aa14.29□□□□□ -0.12
PDLIM7-207ENST00000486828 PAFAH1B2P68402 229 aa14.29□□□□□ -0.12
PDLIM7-207ENST00000486828 SLC35B1P78383 322 aa14.29□□□□□ -0.12
PDLIM7-207ENST00000486828 MMDQ15546 238 aa14.29□□□□□ -0.12
PDLIM7-207ENST00000486828 LHFPL4Q7Z7J7 247 aa14.29□□□□□ -0.12
PDLIM7-207ENST00000486828 MBD6Q96DN6 1003 aa14.29□□□□□ -0.12
PDLIM7-207ENST00000486828 MS4A10Q96PG2 267 aa14.29□□□□□ -0.12
PDLIM7-207ENST00000486828 WNT10AQ9GZT5 417 aa14.29□□□□□ -0.12
PDLIM7-207ENST00000486828 SERF1AO75920 110 aa14.29□□□□□ -0.12
PDLIM7-207ENST00000486828 TPPP2P59282 170 aa14.29□□□□□ -0.12
PDLIM7-207ENST00000486828 CFHR4Q92496 578 aa14.29□□□□□ -0.12
PDLIM7-207ENST00000486828 FAM168AQ92567 244 aa14.29□□□□□ -0.12
PDLIM7-207ENST00000486828 SMIM12Q96EX1 92 aa14.29□□□□□ -0.12
PDLIM7-207ENST00000486828 C14orf144Q96I85 54 aa14.29□□□□□ -0.12
PDLIM7-207ENST00000486828 NOL4LQ96MY1 436 aaPredicted RBP14.29□□□□□ -0.12
PDLIM7-207ENST00000486828 HIGD1AQ9Y241 93 aa14.29□□□□□ -0.12
PDLIM7-207ENST00000486828 KLF12Q9Y4X4 402 aa14.29□□□□□ -0.12
PDLIM7-207ENST00000486828 LOC105371242A0A075B767 164 aa14.28□□□□□ -0.12
PDLIM7-207ENST00000486828 CNIH1O95406 144 aa14.28□□□□□ -0.12
PDLIM7-207ENST00000486828 CA1P00915 261 aaPredicted RBP14.28□□□□□ -0.12
PDLIM7-207ENST00000486828 HLA-DQA1P01909 254 aa14.28□□□□□ -0.12
PDLIM7-207ENST00000486828 PSG1P11464 419 aa14.28□□□□□ -0.12
PDLIM7-207ENST00000486828 CEACAM3P40198 252 aa14.28□□□□□ -0.12
PDLIM7-207ENST00000486828 MRPL54Q6P161 138 aaKnown RBP14.28□□□□□ -0.12
PDLIM7-207ENST00000486828 BAGE3Q86Y29 109 aa14.28□□□□□ -0.12
PDLIM7-207ENST00000486828 ZNF843Q8N446 348 aa14.28□□□□□ -0.12
PDLIM7-207ENST00000486828 NUDT10Q8NFP7 164 aa14.28□□□□□ -0.12
PDLIM7-207ENST00000486828 NUDT11Q96G61 164 aa14.28□□□□□ -0.12
PDLIM7-207ENST00000486828 GRAMD2BQ96HH9 432 aa14.28□□□□□ -0.12
PDLIM7-207ENST00000486828 SSBP3Q9BWW4 388 aaPredicted RBP14.28□□□□□ -0.12
PDLIM7-207ENST00000486828 C7orf69Q9H7B7 122 aa14.28□□□□□ -0.12
PDLIM7-207ENST00000486828 ANKHD1Q8IWZ3 2542 aaKnown RBP14.27□□□□□ -0.12
PDLIM7-207ENST00000486828 ODF3BA8MYP8 253 aa14.27□□□□□ -0.12
PDLIM7-207ENST00000486828 NBR2O15453 112 aa14.27□□□□□ -0.12
PDLIM7-207ENST00000486828 REC114Q7Z4M0 266 aa14.27□□□□□ -0.12
PDLIM7-207ENST00000486828 CHRDL1Q9BU40 450 aa14.27□□□□□ -0.12
PDLIM7-207ENST00000486828 HIVEP3Q5T1R4 2406 aa14.27□□□□□ -0.12
PDLIM7-207ENST00000486828 A6NJY4 79 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms