RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 RAB9AP51151 201 aa11.19□□□□□ -0.62
COL9A1-207ENST00000486080 HILS1P60008 231 aa11.19□□□□□ -0.62
COL9A1-207ENST00000486080 CLEC19AQ6UXS0 136 aa11.19□□□□□ -0.62
COL9A1-207ENST00000486080 TRAV30A0A087WSZ9 112 aa11.19□□□□□ -0.62
COL9A1-207ENST00000486080 TRAV1-1A0A0B4J248 108 aa11.19□□□□□ -0.62
COL9A1-207ENST00000486080 ORM2P19652 201 aa11.19□□□□□ -0.62
COL9A1-207ENST00000486080 PSMB8P28062 276 aa11.19□□□□□ -0.62
COL9A1-207ENST00000486080 SRSF3P84103 164 aaKnown RBP11.19□□□□□ -0.62
COL9A1-207ENST00000486080 FAM78BQ5VT40 261 aa11.19□□□□□ -0.62
COL9A1-207ENST00000486080 OR1B1Q8NGR6 318 aa11.19□□□□□ -0.62
COL9A1-207ENST00000486080 TMPRSS5Q9H3S3 457 aa11.19□□□□□ -0.62
COL9A1-207ENST00000486080 DNAJC4Q9NNZ3 241 aa11.19□□□□□ -0.62
COL9A1-207ENST00000486080 TRBV7-1A0A0A6YYK4 115 aa11.18□□□□□ -0.62
COL9A1-207ENST00000486080 IGHV3-35A0A0C4DH35 117 aa11.18□□□□□ -0.62
COL9A1-207ENST00000486080 COX7A2P2O60397 106 aa11.18□□□□□ -0.62
COL9A1-207ENST00000486080 IGHV3-11P01762 117 aa11.18□□□□□ -0.62
COL9A1-207ENST00000486080 OR5G3P0C626 314 aa11.18□□□□□ -0.62
COL9A1-207ENST00000486080 RHOBP62745 196 aa11.18□□□□□ -0.62
COL9A1-207ENST00000486080 MORN5Q5VZ52 161 aa11.18□□□□□ -0.62
COL9A1-207ENST00000486080 MIR17HGQ75NE6 70 aa11.18□□□□□ -0.62
COL9A1-207ENST00000486080 ZNF414Q96IQ9 312 aa11.18□□□□□ -0.62
COL9A1-207ENST00000486080 UHRF2Q96PU4 802 aa11.18□□□□□ -0.62
COL9A1-207ENST00000486080 TOMM40O96008 361 aa11.17□□□□□ -0.62
COL9A1-207ENST00000486080 YPEL3P61236 119 aaPredicted RBP11.17□□□□□ -0.62
COL9A1-207ENST00000486080 LYZP61626 148 aa11.17□□□□□ -0.62
COL9A1-207ENST00000486080 C10orf113Q5VZT2 155 aa11.17□□□□□ -0.62
COL9A1-207ENST00000486080 IL34Q6ZMJ4 242 aa11.17□□□□□ -0.62
COL9A1-207ENST00000486080 USMG5Q96IX5 58 aa11.17□□□□□ -0.62
COL9A1-207ENST00000486080 FUT9Q9Y231 359 aa11.17□□□□□ -0.62
COL9A1-207ENST00000486080 PPP5D1E7EU14 171 aa11.16□□□□□ -0.62
COL9A1-207ENST00000486080 NUPL2O15504 423 aaKnown RBP11.16□□□□□ -0.62
COL9A1-207ENST00000486080 TRBV12-3P01733 135 aa11.16□□□□□ -0.62
COL9A1-207ENST00000486080 HBE1P02100 147 aa11.16□□□□□ -0.62
COL9A1-207ENST00000486080 FABP1P07148 127 aa11.16□□□□□ -0.62
COL9A1-207ENST00000486080 SLC35B1P78383 322 aa11.16□□□□□ -0.62
COL9A1-207ENST00000486080 KIAA0141Q14154 515 aaPredicted RBP11.16□□□□□ -0.62
COL9A1-207ENST00000486080 OR51G1Q8NGK1 321 aa11.16□□□□□ -0.62
COL9A1-207ENST00000486080 OR1L4Q8NGR5 311 aa11.16□□□□□ -0.62
COL9A1-207ENST00000486080 GATAD1Q8WUU5 269 aa11.16□□□□□ -0.62
COL9A1-207ENST00000486080 PBDC1Q9BVG4 233 aa11.16□□□□□ -0.62
COL9A1-207ENST00000486080 TRAV5A0A0B4J249 113 aa11.16□□□□□ -0.62
COL9A1-207ENST00000486080 HYPMO75409 117 aa11.16□□□□□ -0.62
COL9A1-207ENST00000486080 RPLP1P05386 114 aaKnown RBP11.16□□□□□ -0.62
COL9A1-207ENST00000486080 PLP1P60201 277 aa11.16□□□□□ -0.62
COL9A1-207ENST00000486080 TEX38Q6PEX7 206 aa11.16□□□□□ -0.62
COL9A1-207ENST00000486080 ZNF491Q8N8L2 437 aa11.16□□□□□ -0.62
COL9A1-207ENST00000486080 C19orf24Q9BVV8 132 aa11.16□□□□□ -0.62
COL9A1-207ENST00000486080 SCRT1Q9BWW7 348 aa11.16□□□□□ -0.62
COL9A1-207ENST00000486080 TMEM231Q9H6L2 316 aa11.16□□□□□ -0.62
COL9A1-207ENST00000486080 GNB4Q9HAV0 340 aa11.16□□□□□ -0.62
COL9A1-207ENST00000486080 WI2-2373I1.2A0A1W2PRP0 233 aa11.15□□□□□ -0.62
COL9A1-207ENST00000486080 TMEM89A2RUT3 159 aa11.15□□□□□ -0.62
COL9A1-207ENST00000486080 RAB19A4D1S5 217 aa11.15□□□□□ -0.62
COL9A1-207ENST00000486080 NUDT19A8MXV4 375 aa11.15□□□□□ -0.62
COL9A1-207ENST00000486080 TGOLN2O43493 480 aa11.15□□□□□ -0.62
COL9A1-207ENST00000486080 CRLF1O75462 422 aa11.15□□□□□ -0.62
COL9A1-207ENST00000486080 IL4P05112 153 aa11.15□□□□□ -0.62
COL9A1-207ENST00000486080 CRYBA1P05813 215 aa11.15□□□□□ -0.62
COL9A1-207ENST00000486080 STAG3L2P0CL84 134 aa11.15□□□□□ -0.62
COL9A1-207ENST00000486080 STAG3L3P0CL85 134 aa11.15□□□□□ -0.62
COL9A1-207ENST00000486080 ARL14EPLP0DKL9 152 aa11.15□□□□□ -0.62
COL9A1-207ENST00000486080 SRSF2Q01130 221 aaKnown RBP11.15□□□□□ -0.62
COL9A1-207ENST00000486080 FOXE3Q13461 319 aa11.15□□□□□ -0.62
COL9A1-207ENST00000486080 LINC00305Q7Z4B0 112 aa11.15□□□□□ -0.62
COL9A1-207ENST00000486080 IQCF2Q8IXL9 164 aa11.15□□□□□ -0.62
COL9A1-207ENST00000486080 OR4X2Q8NGF9 303 aa11.15□□□□□ -0.62
COL9A1-207ENST00000486080 Q8WTZ3 238 aa11.15□□□□□ -0.62
COL9A1-207ENST00000486080 RNF125Q96EQ8 232 aa11.15□□□□□ -0.62
COL9A1-207ENST00000486080 FAM210AQ96ND0 272 aa11.15□□□□□ -0.62
COL9A1-207ENST00000486080 OR5B12Q96R08 314 aa11.15□□□□□ -0.62
COL9A1-207ENST00000486080 PFDN5Q99471 154 aa11.15□□□□□ -0.62
COL9A1-207ENST00000486080 PUS1Q9Y606 427 aaKnown RBP eCLIP11.15□□□□□ -0.62
COL9A1-207ENST00000486080 SETD2Q9BYW2 2564 aaPredicted RBP11.15□□□□□ -0.62
COL9A1-207ENST00000486080 IGHV3OR16-8A0A075B7F1 116 aa11.14□□□□□ -0.63
COL9A1-207ENST00000486080 ELOA3CA0A087WX78 387 aaPredicted RBP11.14□□□□□ -0.63
COL9A1-207ENST00000486080 A0A0G2JLM5 398 aa11.14□□□□□ -0.63
COL9A1-207ENST00000486080 ANKRD34BA5PLL1 514 aa11.14□□□□□ -0.63
COL9A1-207ENST00000486080 USF2Q15853 346 aaPredicted RBP11.14□□□□□ -0.63
COL9A1-207ENST00000486080 HAGHQ16775 308 aa11.14□□□□□ -0.63
COL9A1-207ENST00000486080 TOR2AQ5JU69 321 aa11.14□□□□□ -0.63
COL9A1-207ENST00000486080 EIF4E3Q8N5X7 224 aaKnown RBP11.14□□□□□ -0.63
COL9A1-207ENST00000486080 COMMD1Q8N668 190 aa11.14□□□□□ -0.63
COL9A1-207ENST00000486080 RARRES2Q99969 163 aa11.14□□□□□ -0.63
COL9A1-207ENST00000486080 GAR1Q9NY12 217 aaKnown RBP11.14□□□□□ -0.63
COL9A1-207ENST00000486080 GNG13Q9P2W3 67 aa11.14□□□□□ -0.63
COL9A1-207ENST00000486080 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.14□□□□□ -0.63
COL9A1-207ENST00000486080 SCGB2A1O75556 95 aa11.14□□□□□ -0.63
COL9A1-207ENST00000486080 OR2C1O95371 312 aa11.14□□□□□ -0.63
COL9A1-207ENST00000486080 ELANEP08246 267 aa11.14□□□□□ -0.63
COL9A1-207ENST00000486080 ARL3P36405 182 aa11.14□□□□□ -0.63
COL9A1-207ENST00000486080 GUK1Q16774 197 aa11.14□□□□□ -0.63
COL9A1-207ENST00000486080 LEMD1Q68G75 181 aa11.14□□□□□ -0.63
COL9A1-207ENST00000486080 ZNF343Q6P1L6 599 aa11.14□□□□□ -0.63
COL9A1-207ENST00000486080 KLHDC1Q8N7A1 406 aa11.14□□□□□ -0.63
COL9A1-207ENST00000486080 ZNF503Q96F45 646 aa11.14□□□□□ -0.63
COL9A1-207ENST00000486080 FAM167A-AS1Q96KT0 104 aa11.14□□□□□ -0.63
COL9A1-207ENST00000486080 SLC25A2Q9BXI2 301 aa11.14□□□□□ -0.63
COL9A1-207ENST00000486080 MRPL32Q9BYC8 188 aaKnown RBP11.14□□□□□ -0.63
COL9A1-207ENST00000486080 MRPL27Q9P0M9 148 aaKnown RBP11.14□□□□□ -0.63
COL9A1-207ENST00000486080 HIGD1AQ9Y241 93 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms