RNA–Protein interactions for RNA: ENST00000485560.5

ZNF248-206, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best)

Gene ZNF248, Length 1,705 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-206ENST00000485560 RAB5CP51148 216 aa12.45□□□□□ -0.42
ZNF248-206ENST00000485560 ACOT6Q3I5F7 207 aaPredicted RBP12.45□□□□□ -0.42
ZNF248-206ENST00000485560 Q6ZRG5 221 aa12.45□□□□□ -0.42
ZNF248-206ENST00000485560 RPP25LQ8N5L8 163 aaKnown RBP12.45□□□□□ -0.42
ZNF248-206ENST00000485560 OR10G4Q8NGN3 311 aa12.45□□□□□ -0.42
ZNF248-206ENST00000485560 OR10G9Q8NGN4 311 aa12.45□□□□□ -0.42
ZNF248-206ENST00000485560 OR10G7Q8NGN6 311 aa12.45□□□□□ -0.42
ZNF248-206ENST00000485560 ZNF414Q96IQ9 312 aa12.45□□□□□ -0.42
ZNF248-206ENST00000485560 IGHV3-35A0A0C4DH35 117 aa12.45□□□□□ -0.42
ZNF248-206ENST00000485560 CLPSL1A2RUU4 121 aa12.45□□□□□ -0.42
ZNF248-206ENST00000485560 SCGB2A1O75556 95 aa12.45□□□□□ -0.42
ZNF248-206ENST00000485560 MBP02144 154 aa12.45□□□□□ -0.42
ZNF248-206ENST00000485560 FABP1P07148 127 aa12.45□□□□□ -0.42
ZNF248-206ENST00000485560 HIST2H2BDQ6DRA6 164 aa12.45□□□□□ -0.42
ZNF248-206ENST00000485560 UBE2E2Q96LR5 201 aa12.45□□□□□ -0.42
ZNF248-206ENST00000485560 DOK5Q9P104 306 aa12.45□□□□□ -0.42
ZNF248-206ENST00000485560 EIF3GO75821 320 aaKnown RBP eCLIP12.44□□□□□ -0.42
ZNF248-206ENST00000485560 ARL3P36405 182 aa12.44□□□□□ -0.42
ZNF248-206ENST00000485560 PROK1P58294 105 aa12.44□□□□□ -0.42
ZNF248-206ENST00000485560 RAB14P61106 215 aa12.44□□□□□ -0.42
ZNF248-206ENST00000485560 ZNF726P1Q15940 193 aa12.44□□□□□ -0.42
ZNF248-206ENST00000485560 FAM122CQ6P4D5 195 aa12.44□□□□□ -0.42
ZNF248-206ENST00000485560 SPSB3Q6PJ21 355 aa12.44□□□□□ -0.42
ZNF248-206ENST00000485560 OR51G1Q8NGK1 321 aa12.44□□□□□ -0.42
ZNF248-206ENST00000485560 LRRC20Q8TCA0 184 aa12.44□□□□□ -0.42
ZNF248-206ENST00000485560 TMEM37Q8WXS4 190 aa12.44□□□□□ -0.42
ZNF248-206ENST00000485560 ORM2P19652 201 aa12.43□□□□□ -0.42
ZNF248-206ENST00000485560 LYZP61626 148 aa12.43□□□□□ -0.42
ZNF248-206ENST00000485560 CLLU1Q5K131 121 aa12.43□□□□□ -0.42
ZNF248-206ENST00000485560 PATE2Q6UY27 113 aa12.43□□□□□ -0.42
ZNF248-206ENST00000485560 DPPA3Q6W0C5 159 aa12.43□□□□□ -0.42
ZNF248-206ENST00000485560 SSX7Q7RTT5 188 aa12.43□□□□□ -0.42
ZNF248-206ENST00000485560 Q8WTZ3 238 aa12.43□□□□□ -0.42
ZNF248-206ENST00000485560 SAT2Q96F10 170 aaPredicted RBP12.43□□□□□ -0.42
ZNF248-206ENST00000485560 RCC1LQ96I51 464 aaKnown RBP12.43□□□□□ -0.42
ZNF248-206ENST00000485560 IL4P05112 153 aa12.42□□□□□ -0.42
ZNF248-206ENST00000485560 CD28P10747 220 aa12.42□□□□□ -0.42
ZNF248-206ENST00000485560 PLP1P60201 277 aa12.42□□□□□ -0.42
ZNF248-206ENST00000485560 ZNF600Q6ZNG1 722 aa12.42□□□□□ -0.42
ZNF248-206ENST00000485560 C18orf65Q6ZTR6 163 aa12.42□□□□□ -0.42
ZNF248-206ENST00000485560 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.42□□□□□ -0.42
ZNF248-206ENST00000485560 C11orf44Q8N8P7 122 aa12.42□□□□□ -0.42
ZNF248-206ENST00000485560 OR1B1Q8NGR6 318 aa12.42□□□□□ -0.42
ZNF248-206ENST00000485560 SLC25A22Q9H936 323 aa12.42□□□□□ -0.42
ZNF248-206ENST00000485560 SEPSECSQ9HD40 501 aaKnown RBP12.42□□□□□ -0.42
ZNF248-206ENST00000485560 PEF1Q9UBV8 284 aaKnown RBP12.42□□□□□ -0.42
ZNF248-206ENST00000485560 PUS1Q9Y606 427 aaKnown RBP eCLIP12.42□□□□□ -0.42
ZNF248-206ENST00000485560 WI2-2373I1.2A0A1W2PRP0 233 aa12.42□□□□□ -0.42
ZNF248-206ENST00000485560 BMPR1BO00238 502 aa12.42□□□□□ -0.42
ZNF248-206ENST00000485560 COX7A2P2O60397 106 aa12.42□□□□□ -0.42
ZNF248-206ENST00000485560 LGALS1P09382 135 aaKnown RBP12.42□□□□□ -0.42
ZNF248-206ENST00000485560 OR5G3P0C626 314 aa12.42□□□□□ -0.42
ZNF248-206ENST00000485560 KHDC1LQ5JSQ8 128 aa12.42□□□□□ -0.42
ZNF248-206ENST00000485560 PXDC1Q5TGL8 231 aa12.42□□□□□ -0.42
ZNF248-206ENST00000485560 PBDC1Q9BVG4 233 aa12.42□□□□□ -0.42
ZNF248-206ENST00000485560 DNAJC4Q9NNZ3 241 aa12.42□□□□□ -0.42
ZNF248-206ENST00000485560 SEC14L6B5MCN3 397 aa12.41□□□□□ -0.42
ZNF248-206ENST00000485560 HMGB3O15347 200 aaKnown RBP12.41□□□□□ -0.42
ZNF248-206ENST00000485560 OR2C1O95371 312 aa12.41□□□□□ -0.42
ZNF248-206ENST00000485560 CDX1P47902 265 aaPredicted RBP12.41□□□□□ -0.42
ZNF248-206ENST00000485560 CDC34P49427 236 aaPredicted RBP12.41□□□□□ -0.42
ZNF248-206ENST00000485560 BLOC1S1P78537 153 aa12.41□□□□□ -0.42
ZNF248-206ENST00000485560 FAM78BQ5VT40 261 aa12.41□□□□□ -0.42
ZNF248-206ENST00000485560 SPATA31B1PQ5VZV4 182 aa12.41□□□□□ -0.42
ZNF248-206ENST00000485560 TOMM20LQ6UXN7 152 aa12.41□□□□□ -0.42
ZNF248-206ENST00000485560 OR1L4Q8NGR5 311 aa12.41□□□□□ -0.42
ZNF248-206ENST00000485560 GATAD1Q8WUU5 269 aa12.41□□□□□ -0.42
ZNF248-206ENST00000485560 RAB24Q969Q5 203 aa12.41□□□□□ -0.42
ZNF248-206ENST00000485560 RNF125Q96EQ8 232 aa12.41□□□□□ -0.42
ZNF248-206ENST00000485560 UHRF2Q96PU4 802 aa12.41□□□□□ -0.42
ZNF248-206ENST00000485560 PFDN5Q99471 154 aa12.41□□□□□ -0.42
ZNF248-206ENST00000485560 ACTR3CQ9C0K3 210 aaPredicted RBP12.41□□□□□ -0.42
ZNF248-206ENST00000485560 IGHV3OR16-8A0A075B7F1 116 aa12.4□□□□□ -0.42
ZNF248-206ENST00000485560 A0A1W2PPV4 95 aa12.4□□□□□ -0.42
ZNF248-206ENST00000485560 I3L521 148 aa12.4□□□□□ -0.42
ZNF248-206ENST00000485560 HYPMO75409 117 aa12.4□□□□□ -0.42
ZNF248-206ENST00000485560 H2AFB1P0C5Y9 115 aa12.4□□□□□ -0.42
ZNF248-206ENST00000485560 RELQ04864 619 aaPredicted RBP12.4□□□□□ -0.42
ZNF248-206ENST00000485560 USF2Q15853 346 aaPredicted RBP12.4□□□□□ -0.42
ZNF248-206ENST00000485560 FAM209BQ5JX69 171 aa12.4□□□□□ -0.42
ZNF248-206ENST00000485560 C10orf113Q5VZT2 155 aa12.4□□□□□ -0.42
ZNF248-206ENST00000485560 ZFAND3Q9H8U3 227 aa12.4□□□□□ -0.42
ZNF248-206ENST00000485560 ELOA3CA0A087WX78 387 aaPredicted RBP12.4□□□□□ -0.43
ZNF248-206ENST00000485560 CTXND1A0A1B0GTU2 59 aa12.4□□□□□ -0.43
ZNF248-206ENST00000485560 A0A1B0GV50 99 aa12.4□□□□□ -0.43
ZNF248-206ENST00000485560 GGCTO75223 188 aaKnown RBP12.4□□□□□ -0.43
ZNF248-206ENST00000485560 RHOBP62745 196 aa12.4□□□□□ -0.43
ZNF248-206ENST00000485560 MORN5Q5VZ52 161 aa12.4□□□□□ -0.43
ZNF248-206ENST00000485560 LCN15Q6UWW0 184 aa12.4□□□□□ -0.43
ZNF248-206ENST00000485560 MIR17HGQ75NE6 70 aa12.4□□□□□ -0.43
ZNF248-206ENST00000485560 SFT2D1Q8WV19 159 aa12.4□□□□□ -0.43
ZNF248-206ENST00000485560 C19orf24Q9BVV8 132 aa12.4□□□□□ -0.43
ZNF248-206ENST00000485560 HRH4Q9H3N8 390 aa12.4□□□□□ -0.43
ZNF248-206ENST00000485560 MRPL27Q9P0M9 148 aaKnown RBP12.4□□□□□ -0.43
ZNF248-206ENST00000485560 FGF8P55075 233 aaPredicted RBP12.39□□□□□ -0.43
ZNF248-206ENST00000485560 LINC00305Q7Z4B0 112 aa12.39□□□□□ -0.43
ZNF248-206ENST00000485560 C4orf3Q8WVX3 66 aa12.39□□□□□ -0.43
ZNF248-206ENST00000485560 MBD3L1Q8WWY6 194 aa12.39□□□□□ -0.43
ZNF248-206ENST00000485560 CITED2Q99967 270 aaPredicted RBP12.39□□□□□ -0.43
ZNF248-206ENST00000485560 FUT9Q9Y231 359 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms