RNA–Protein interactions for RNA: ENST00000485365.1

SFPQ-208, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 693 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-208	ENST00000485365	ZNF256	Q9Y2P7	627 aa	Predicted RBP	3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	ZNF257	Q9Y2Q1	563 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	KCNIP3	Q9Y2W7	256 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	HSPB11	Q9Y547	144 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	IGHV3OR16-8	A0A075B7F1	116 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	FAM240B	A0A1B0GVZ2	78 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365		A0A1B0GW64	132 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365		A0A1W2PS18	150 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	ANKRD20A5P	A0PJZ0	165 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	MFSD2B	A6NFX1	497 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	OR2T8	A6NH00	312 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	CEBPZOS	A8MTT3	80 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	INMT-MINDY4	F8WBC2	141 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365		H0Y980	276 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	CTDSPL	O15194	276 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	ZNF207	O43670	478 aa	Known RBP	3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	CD74	P04233	296 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	CTSD	P07339	412 aa	Predicted RBP	3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	GP9	P14770	177 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	HIST1H1B	P16401	226 aa	Known RBP	3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	CTRB1	P17538	263 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	TBP	P20226	339 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	GPR183	P32249	361 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	SNCA	P37840	140 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	INSL3	P51460	131 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	AP3S2	P59780	193 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	SSBP1	Q04837	148 aa	Known RBP	3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	FAM106A	Q4KMX7	169 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	KPRP	Q5T749	579 aa	Predicted RBP	3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	CTRB2	Q6GPI1	263 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	ZNF343	Q6P1L6	599 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	COMMD7	Q86VX2	200 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	SLC35G3	Q8N808	338 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	OR9G4	Q8NGQ1	327 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	MYOZ3	Q8TDC0	251 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	LSM10	Q969L4	123 aa	Known RBP	3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	PRRT1	Q99946	306 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	SOST	Q9BQB4	213 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	PYGO2	Q9BRQ0	406 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	RTBDN	Q9BSG5	229 aa	Predicted RBP	3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	C20orf24	Q9BUV8	137 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	NAA60	Q9H7X0	242 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	TUBA4B	Q9H853	241 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	PLEKHA3	Q9HB20	300 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	PLXNB1	O43157	2135 aa		3.56	□□□□□ -1.84
SFPQ-208	ENST00000485365	IGKV3-7	A0A075B6H7	116 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	TRAV6	A0A075B6T7	132 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	IGHV3-49	A0A0A0MS15	119 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	TRBV7-1	A0A0A6YYK4	115 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	TRBV9	A0A0B4J1U6	114 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	IGLC7	A0M8Q6	106 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	LINC00862	A6NCI5	91 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	C15orf61	A6NNL5	157 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	ST8SIA3	O43173	380 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	GSTZ1	O43708	216 aa	Predicted RBP	3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	TPPP	O94811	219 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	IGKV1-39	P01597	117 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	IGKV1-5	P01602	117 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	IGKV1D-39	P04432	117 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	CRYGC	P07315	174 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	ANXA3	P12429	323 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	BTC	P35070	178 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	SUB1	P53999	127 aa	Known RBP eCLIP	3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	RND3	P61587	244 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	HSPE1	P61604	102 aa	Known RBP	3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	DHODH	Q02127	395 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	WT1-AS	Q06250	92 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	KLF5	Q13887	457 aa	Predicted RBP	3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	POU2AF1	Q16633	256 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	LHFPL1	Q86WI0	220 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	SELENOH	Q8IZQ5	122 aa	Known RBP	3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	DUSP18	Q8NEJ0	188 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	OR11H7	Q8NGC8	314 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	PCNP	Q8WW12	178 aa	Known RBP	3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	CACNG8	Q8WXS5	425 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	GPR146	Q96CH1	333 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	SEC22A	Q96IW7	307 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	CXorf58	Q96LI9	332 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	MED28	Q9H204	178 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	C5orf66	Q9H5L9	145 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	NDUFA4L2	Q9NRX3	87 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	C21orf62	Q9NYP8	219 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	CACNG5	Q9UF02	275 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	GPR132	Q9UNW8	380 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	PRELID1	Q9Y255	219 aa		3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	F11R	Q9Y624	299 aa	Known RBP	3.55	□□□□□ -1.84
SFPQ-208	ENST00000485365	IGLV11-55	A0A075B6I3	123 aa		3.54	□□□□□ -1.84
SFPQ-208	ENST00000485365	IGHV3OR16-13	A0A075B7E8	117 aa		3.54	□□□□□ -1.84
SFPQ-208	ENST00000485365	IGHV3-74	A0A0B4J1X5	117 aa		3.54	□□□□□ -1.84
SFPQ-208	ENST00000485365		A0A0G2JRQ6	117 aa		3.54	□□□□□ -1.84
SFPQ-208	ENST00000485365	C7orf66	A4D0T2	115 aa		3.54	□□□□□ -1.84
SFPQ-208	ENST00000485365	IZUMO1R	A6ND01	250 aa		3.54	□□□□□ -1.84
SFPQ-208	ENST00000485365	CRYM-AS1	A6NIL9	109 aa		3.54	□□□□□ -1.84
SFPQ-208	ENST00000485365	NUPL2	O15504	423 aa	Known RBP	3.54	□□□□□ -1.84
SFPQ-208	ENST00000485365	GNG7	O60262	68 aa		3.54	□□□□□ -1.84
SFPQ-208	ENST00000485365	MT-CO2	P00403	227 aa		3.54	□□□□□ -1.84
SFPQ-208	ENST00000485365	CSN3	P07498	182 aa		3.54	□□□□□ -1.84
SFPQ-208	ENST00000485365	FOLR2	P14207	255 aa		3.54	□□□□□ -1.84
SFPQ-208	ENST00000485365	PTBP1	P26599	531 aa	Known RBP eCLIP	3.54	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms