RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 RGS21Q2M5E4 152 aa4.28□□□□□ -1.72
SEMA3D-204ENST00000484038 ACTL10Q5JWF8 245 aa4.28□□□□□ -1.72
SEMA3D-204ENST00000484038 TOMM20LQ6UXN7 152 aa4.28□□□□□ -1.72
SEMA3D-204ENST00000484038 ZNF818PQ6ZRF7 136 aa4.28□□□□□ -1.72
SEMA3D-204ENST00000484038 DUSP18Q8NEJ0 188 aa4.28□□□□□ -1.72
SEMA3D-204ENST00000484038 BEST4Q8NFU0 473 aa4.28□□□□□ -1.72
SEMA3D-204ENST00000484038 S100ZQ8WXG8 99 aa4.28□□□□□ -1.72
SEMA3D-204ENST00000484038 TMEM56Q96MV1 263 aa4.28□□□□□ -1.72
SEMA3D-204ENST00000484038 KRTAP1-5Q9BYS1 174 aa4.28□□□□□ -1.72
SEMA3D-204ENST00000484038 VSIRQ9H7M9 311 aa4.28□□□□□ -1.72
SEMA3D-204ENST00000484038 TRAV2A0A0B4J234 112 aa4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 TRAV1-2A0A0B4J238 106 aa4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 BOLA2-SMG1P6H3BVE0 249 aa4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 I3L2K1 104 aa4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 CDK2AP2O75956 126 aa4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 EMP1P54849 157 aa4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 HERV-K104P61576 105 aa4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 MXD1Q05195 221 aa4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 TRIM16LQ309B1 348 aa4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 C1orf134Q5TEV5 83 aa4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 Q6ZR54 194 aa4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 TPRA1Q86W33 373 aa4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 OR1P1Q8NH06 330 aa4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 FCAMRQ8WWV6 532 aa4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 MOB3AQ96BX8 217 aa4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 TXN2Q99757 166 aa4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 TMEM231Q9H6L2 316 aa4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 CCDC59Q9P031 241 aaKnown RBP4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 PUS1Q9Y606 427 aaKnown RBP eCLIP4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 HSPG2P98160 4391 aa4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 DNAH17Q9UFH2 4485 aa4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 DYNC1H1Q14204 4646 aaKnown RBP4.27□□□□□ -1.73
SEMA3D-204ENST00000484038 K7EQG2 157 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 CTDSP2O14595 271 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 SCGNO76038 276 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 CD74P04233 296 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 HTN3P15516 51 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 LPAR6P43657 344 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 BCAP31P51572 246 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 C22orf42Q6IC83 251 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 ZNF600Q6ZNG1 722 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 CSNK1G2-AS1Q8NCQ2 148 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 LGALS14Q8TCE9 139 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 FKBP11Q9NYL4 201 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 XCL2Q9UBD3 114 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 PRNDQ9UKY0 176 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 IGHV3OR16-12A0A075B7B8 117 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 A0A1B0GU03 582 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 A0A1W2PS18 150 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 MEIS3P1A6NDR6 274 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 UPK1BO75841 260 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 SPART-AS1P0CW21 52 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 NPPCP23582 126 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 F2RP25116 425 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 GNRHRP30968 328 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 S100A5P33763 92 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 P2RY1P47900 373 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 NPBWR1P48145 328 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 PPP5CP53041 499 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 NUTF2P61970 127 aaKnown RBP4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 OXA1LQ15070 435 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 PSMG4Q5JS54 123 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 LINC00299Q6ZSB3 139 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 HOGA1Q86XE5 327 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 GRAMD2BQ96HH9 432 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 NARS2Q96I59 477 aaKnown RBP4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 METTL26Q96S19 204 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 C1QTNF4Q9BXJ3 329 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 SCRT2Q9NQ03 307 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 TXNL4BQ9NX01 149 aaKnown RBP4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 NDUFB11Q9NX14 153 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 EHFQ9NZC4 300 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 SSR3Q9UNL2 185 aa4.26□□□□□ -1.73
SEMA3D-204ENST00000484038 AGRNO00468 2067 aa4.25□□□□□ -1.73
SEMA3D-204ENST00000484038 DNAH11Q96DT5 4516 aa4.25□□□□□ -1.73
SEMA3D-204ENST00000484038 TRAV18A0A075B6X5 111 aa4.25□□□□□ -1.73
SEMA3D-204ENST00000484038 TRDV1A0A1B0GX56 115 aa4.25□□□□□ -1.73
SEMA3D-204ENST00000484038 HELTA6NFD8 242 aa4.25□□□□□ -1.73
SEMA3D-204ENST00000484038 PGLYRP1O75594 196 aaPredicted RBP4.25□□□□□ -1.73
SEMA3D-204ENST00000484038 CD300CQ08708 224 aa4.25□□□□□ -1.73
SEMA3D-204ENST00000484038 SPINK9Q5DT21 86 aa4.25□□□□□ -1.73
SEMA3D-204ENST00000484038 CCDC190Q86UF4 302 aa4.25□□□□□ -1.73
SEMA3D-204ENST00000484038 CMTM1Q8IZ96 169 aa4.25□□□□□ -1.73
SEMA3D-204ENST00000484038 ZNF114Q8NC26 417 aa4.25□□□□□ -1.73
SEMA3D-204ENST00000484038 OR5AP2Q8NGF4 316 aa4.25□□□□□ -1.73
SEMA3D-204ENST00000484038 OR4A16Q8NH70 328 aa4.25□□□□□ -1.73
SEMA3D-204ENST00000484038 DCANP1Q8TF63 244 aa4.25□□□□□ -1.73
SEMA3D-204ENST00000484038 TMEM170AQ8WVE7 144 aa4.25□□□□□ -1.73
SEMA3D-204ENST00000484038 RAB40CQ96S21 281 aa4.25□□□□□ -1.73
SEMA3D-204ENST00000484038 IFT46Q9NQC8 304 aa4.25□□□□□ -1.73
SEMA3D-204ENST00000484038 TMED3Q9Y3Q3 217 aa4.25□□□□□ -1.73
SEMA3D-204ENST00000484038 TMEM189A5PLL7 270 aa4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 RGS5O15539 181 aa4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 IGKV3-20P01619 116 aa4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 CRYBB3P26998 211 aa4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 SDC2P34741 201 aa4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 SNCAP37840 140 aa4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 EIF2B2P49770 351 aaKnown RBP4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 RORCP51449 518 aa4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 ERHP84090 104 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms