RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 NMES1Q9C002 83 aa15.69■□□□□ 0.1
SEC13-217ENST00000482647 IGHV3-66A0A0C4DH42 116 aa15.68■□□□□ 0.1
SEC13-217ENST00000482647 SMCO3A2RU48 225 aa15.68■□□□□ 0.1
SEC13-217ENST00000482647 A8MZ25 164 aa15.68■□□□□ 0.1
SEC13-217ENST00000482647 CD7P09564 240 aa15.68■□□□□ 0.1
SEC13-217ENST00000482647 CAV2P51636 162 aa15.68■□□□□ 0.1
SEC13-217ENST00000482647 GRAMD2BQ96HH9 432 aa15.68■□□□□ 0.1
SEC13-217ENST00000482647 TUBA4BQ9H853 241 aa15.68■□□□□ 0.1
SEC13-217ENST00000482647 IGKV1OR2-108A0A075B7D4 117 aa15.67■□□□□ 0.1
SEC13-217ENST00000482647 OR4C46A6NHA9 309 aa15.67■□□□□ 0.1
SEC13-217ENST00000482647 HNRNPCP07910 306 aaKnown RBP eCLIP15.67■□□□□ 0.1
SEC13-217ENST00000482647 FRMD6-AS1P0C7T7 363 aa15.67■□□□□ 0.1
SEC13-217ENST00000482647 DLK1P80370 383 aa15.67■□□□□ 0.1
SEC13-217ENST00000482647 USF2Q15853 346 aaPredicted RBP15.67■□□□□ 0.1
SEC13-217ENST00000482647 FAM90A2PQ658T7 463 aa15.67■□□□□ 0.1
SEC13-217ENST00000482647 TCF24Q7RTU0 167 aa15.67■□□□□ 0.1
SEC13-217ENST00000482647 TMEM144Q7Z5S9 345 aa15.67■□□□□ 0.1
SEC13-217ENST00000482647 LILRB2Q8N423 598 aa15.67■□□□□ 0.1
SEC13-217ENST00000482647 RNF125Q96EQ8 232 aa15.67■□□□□ 0.1
SEC13-217ENST00000482647 GGACTQ9BVM4 153 aa15.67■□□□□ 0.1
SEC13-217ENST00000482647 C11orf1Q9H5F2 150 aa15.67■□□□□ 0.1
SEC13-217ENST00000482647 MGAT4CQ9UBM8 478 aa15.67■□□□□ 0.1
SEC13-217ENST00000482647 RABAC1Q9UI14 185 aa15.67■□□□□ 0.1
SEC13-217ENST00000482647 FNDC10F2Z333 226 aa15.66■□□□□ 0.1
SEC13-217ENST00000482647 DEDDO75618 318 aa15.66■□□□□ 0.1
SEC13-217ENST00000482647 CCNKO75909 580 aa15.66■□□□□ 0.1
SEC13-217ENST00000482647 DFFBO76075 338 aa15.66■□□□□ 0.1
SEC13-217ENST00000482647 CFDP00746 253 aaPredicted RBP15.66■□□□□ 0.1
SEC13-217ENST00000482647 RLN2P04090 185 aa15.66■□□□□ 0.1
SEC13-217ENST00000482647 RRAS2P62070 204 aaPredicted RBP15.66■□□□□ 0.1
SEC13-217ENST00000482647 RPL11P62913 178 aaKnown RBP15.66■□□□□ 0.1
SEC13-217ENST00000482647 PAFAH1B2P68402 229 aa15.66■□□□□ 0.1
SEC13-217ENST00000482647 OR2F1Q13607 317 aa15.66■□□□□ 0.1
SEC13-217ENST00000482647 RGS21Q2M5E4 152 aa15.66■□□□□ 0.1
SEC13-217ENST00000482647 NPVFQ9HCQ7 196 aa15.66■□□□□ 0.1
SEC13-217ENST00000482647 C19orf73Q9NVV2 129 aa15.66■□□□□ 0.1
SEC13-217ENST00000482647 PFDN2Q9UHV9 154 aa15.66■□□□□ 0.1
SEC13-217ENST00000482647 ALG5Q9Y673 324 aa15.66■□□□□ 0.1
SEC13-217ENST00000482647 U3KQE9 123 aa15.66■□□□□ 0.1
SEC13-217ENST00000482647 OR11H12B2RN74 326 aa15.65■□□□□ 0.1
SEC13-217ENST00000482647 H2BFSP57053 126 aa15.65■□□□□ 0.1
SEC13-217ENST00000482647 PBDC1Q9BVG4 233 aa15.65■□□□□ 0.1
SEC13-217ENST00000482647 LYRM2Q9NU23 88 aaPredicted RBP15.65■□□□□ 0.1
SEC13-217ENST00000482647 DNAH9Q9NYC9 4486 aa15.65■□□□□ 0.1
SEC13-217ENST00000482647 FAM24AA6NFZ4 105 aa15.64■□□□□ 0.09
SEC13-217ENST00000482647 NHLRC4P0CG21 123 aaPredicted RBP15.64■□□□□ 0.09
SEC13-217ENST00000482647 P2RY1P47900 373 aa15.64■□□□□ 0.09
SEC13-217ENST00000482647 ARL16Q0P5N6 197 aa15.64■□□□□ 0.09
SEC13-217ENST00000482647 DEFB125Q8N687 156 aa15.64■□□□□ 0.09
SEC13-217ENST00000482647 IGKV3-7A0A075B6H7 116 aa15.63■□□□□ 0.09
SEC13-217ENST00000482647 CST7O76096 145 aa15.63■□□□□ 0.09
SEC13-217ENST00000482647 NUP62P37198 522 aaPredicted RBP15.63■□□□□ 0.09
SEC13-217ENST00000482647 EIF2B2P49770 351 aaKnown RBP15.63■□□□□ 0.09
SEC13-217ENST00000482647 SULT1A1P50225 295 aa15.63■□□□□ 0.09
SEC13-217ENST00000482647 LYZP61626 148 aa15.63■□□□□ 0.09
SEC13-217ENST00000482647 STX12Q86Y82 276 aa15.63■□□□□ 0.09
SEC13-217ENST00000482647 GBGT1Q8N5D6 347 aa15.63■□□□□ 0.09
SEC13-217ENST00000482647 BPIFCQ8NFQ6 507 aa15.63■□□□□ 0.09
SEC13-217ENST00000482647 ASCL2Q99929 193 aa15.63■□□□□ 0.09
SEC13-217ENST00000482647 HELTA6NFD8 242 aa15.62■□□□□ 0.09
SEC13-217ENST00000482647 DNASE2O00115 360 aaPredicted RBP15.62■□□□□ 0.09
SEC13-217ENST00000482647 TFPI2P48307 235 aa15.62■□□□□ 0.09
SEC13-217ENST00000482647 CMC4P56277 68 aaPredicted RBP15.62■□□□□ 0.09
SEC13-217ENST00000482647 SLC38A11Q08AI6 406 aa15.62■□□□□ 0.09
SEC13-217ENST00000482647 LRRC37A5PQ49AS3 106 aa15.62■□□□□ 0.09
SEC13-217ENST00000482647 TEPPQ6URK8 271 aa15.62■□□□□ 0.09
SEC13-217ENST00000482647 C16orf54Q6UWD8 224 aa15.62■□□□□ 0.09
SEC13-217ENST00000482647 TMEM252Q8N6L7 170 aa15.62■□□□□ 0.09
SEC13-217ENST00000482647 TMEM217Q8N7C4 229 aa15.62■□□□□ 0.09
SEC13-217ENST00000482647 MS4A6AQ9H2W1 248 aa15.62■□□□□ 0.09
SEC13-217ENST00000482647 E5RGE8 158 aa15.61■□□□□ 0.09
SEC13-217ENST00000482647 BUB3O43684 328 aa15.61■□□□□ 0.09
SEC13-217ENST00000482647 S100A11P31949 105 aa15.61■□□□□ 0.09
SEC13-217ENST00000482647 AP2S1P53680 142 aaPredicted RBP15.61■□□□□ 0.09
SEC13-217ENST00000482647 SELENOTP62341 195 aa15.61■□□□□ 0.09
SEC13-217ENST00000482647 CYP2G1PQ6ZSU1 146 aa15.61■□□□□ 0.09
SEC13-217ENST00000482647 PPP1R1CQ8WVI7 109 aa15.61■□□□□ 0.09
SEC13-217ENST00000482647 WFDC10AQ9H1F0 79 aa15.61■□□□□ 0.09
SEC13-217ENST00000482647 SRD5A3Q9H8P0 318 aa15.61■□□□□ 0.09
SEC13-217ENST00000482647 COL7A1Q02388 2944 aa15.6■□□□□ 0.09
SEC13-217ENST00000482647 TRAV2A0A0B4J234 112 aa15.6■□□□□ 0.09
SEC13-217ENST00000482647 IGSF23A1L1A6 192 aa15.6■□□□□ 0.09
SEC13-217ENST00000482647 HBG1P69891 147 aa15.6■□□□□ 0.09
SEC13-217ENST00000482647 HBG2P69892 147 aa15.6■□□□□ 0.09
SEC13-217ENST00000482647 TMEM182Q6ZP80 229 aaPredicted RBP15.6■□□□□ 0.09
SEC13-217ENST00000482647 WFDC3Q8IUB2 231 aa15.6■□□□□ 0.09
SEC13-217ENST00000482647 SBSPONQ8IVN8 264 aa15.6■□□□□ 0.09
SEC13-217ENST00000482647 FAM110AQ9BQ89 295 aa15.6■□□□□ 0.09
SEC13-217ENST00000482647 MED28Q9H204 178 aa15.6■□□□□ 0.09
SEC13-217ENST00000482647 PET100P0DJ07 73 aa15.59■□□□□ 0.09
SEC13-217ENST00000482647 GATA2P23769 480 aaPredicted RBP15.59■□□□□ 0.09
SEC13-217ENST00000482647 S100A7P31151 101 aa15.59■□□□□ 0.09
SEC13-217ENST00000482647 GLMPQ8WWB7 406 aa15.59■□□□□ 0.09
SEC13-217ENST00000482647 PPP1R14BQ96C90 147 aa15.59■□□□□ 0.09
SEC13-217ENST00000482647 SLC25A31Q9H0C2 315 aa15.59■□□□□ 0.09
SEC13-217ENST00000482647 OR5AC2Q9NZP5 309 aa15.59■□□□□ 0.09
SEC13-217ENST00000482647 UBQLN2Q9UHD9 624 aa15.59■□□□□ 0.09
SEC13-217ENST00000482647 H0YIZ8 118 aa15.58■□□□□ 0.08
SEC13-217ENST00000482647 ORM2P19652 201 aa15.58■□□□□ 0.08
SEC13-217ENST00000482647 OXA1LQ15070 435 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms