RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 RASL11BQ9BPW5 248 aa12.47□□□□□ -0.41
RXRA-202ENST00000481739 PYGO2Q9BRQ0 406 aa12.47□□□□□ -0.41
RXRA-202ENST00000481739 THYN1Q9P016 225 aa12.47□□□□□ -0.41
RXRA-202ENST00000481739 TRAV30A0A087WSZ9 112 aa12.46□□□□□ -0.41
RXRA-202ENST00000481739 TGIF2-C20orf24A0A0A6YYL0 155 aa12.46□□□□□ -0.41
RXRA-202ENST00000481739 TRAV20A0A0B4J274 112 aa12.46□□□□□ -0.41
RXRA-202ENST00000481739 HLA-DRB1P01911 266 aa12.46□□□□□ -0.41
RXRA-202ENST00000481739 PFN1P07737 140 aaKnown RBP12.46□□□□□ -0.41
RXRA-202ENST00000481739 CXCL1P09341 107 aa12.46□□□□□ -0.41
RXRA-202ENST00000481739 GALR1P47211 349 aa12.46□□□□□ -0.41
RXRA-202ENST00000481739 KCNIP4Q6PIL6 250 aa12.46□□□□□ -0.41
RXRA-202ENST00000481739 S100A7AQ86SG5 101 aa12.46□□□□□ -0.41
RXRA-202ENST00000481739 ZFP82Q8N141 532 aa12.46□□□□□ -0.41
RXRA-202ENST00000481739 DERL1Q9BUN8 251 aa12.46□□□□□ -0.41
RXRA-202ENST00000481739 C7orf69Q9H7B7 122 aa12.46□□□□□ -0.41
RXRA-202ENST00000481739 PLXNB1O43157 2135 aa12.46□□□□□ -0.42
RXRA-202ENST00000481739 MDFIC2A0A1B0GVS7 189 aa12.46□□□□□ -0.42
RXRA-202ENST00000481739 K7EIM0 57 aa12.46□□□□□ -0.42
RXRA-202ENST00000481739 SCGB2A1O75556 95 aa12.46□□□□□ -0.42
RXRA-202ENST00000481739 CD24P25063 80 aa12.46□□□□□ -0.42
RXRA-202ENST00000481739 OR1B1Q8NGR6 318 aa12.46□□□□□ -0.42
RXRA-202ENST00000481739 C2CD4CQ8TF44 421 aa12.46□□□□□ -0.42
RXRA-202ENST00000481739 IGHV3OR16-10A0A075B7F0 116 aa12.45□□□□□ -0.42
RXRA-202ENST00000481739 TGFAP01135 160 aa12.45□□□□□ -0.42
RXRA-202ENST00000481739 OR10J4P0C629 311 aa12.45□□□□□ -0.42
RXRA-202ENST00000481739 RPL35P42766 123 aaKnown RBP12.45□□□□□ -0.42
RXRA-202ENST00000481739 KRTAP1-3Q8IUG1 177 aa12.45□□□□□ -0.42
RXRA-202ENST00000481739 AJUBAQ96IF1 538 aa12.45□□□□□ -0.42
RXRA-202ENST00000481739 SAV1Q9H4B6 383 aaPredicted RBP12.45□□□□□ -0.42
RXRA-202ENST00000481739 CSMD1Q96PZ7 3565 aa12.44□□□□□ -0.42
RXRA-202ENST00000481739 TRBV20OR9-2A0A075B6H5 130 aa12.44□□□□□ -0.42
RXRA-202ENST00000481739 IGLV11-55A0A075B6I3 123 aa12.44□□□□□ -0.42
RXRA-202ENST00000481739 CENPVL3A0A0U1RRI6 287 aa12.44□□□□□ -0.42
RXRA-202ENST00000481739 GGTLC3B5MD39 225 aa12.44□□□□□ -0.42
RXRA-202ENST00000481739 ORM2P19652 201 aa12.44□□□□□ -0.42
RXRA-202ENST00000481739 C19orf35Q6ZS72 473 aa12.44□□□□□ -0.42
RXRA-202ENST00000481739 Q8N9W7 124 aa12.44□□□□□ -0.42
RXRA-202ENST00000481739 SFRP2Q96HF1 295 aa12.44□□□□□ -0.42
RXRA-202ENST00000481739 TMEM68Q96MH6 324 aa12.44□□□□□ -0.42
RXRA-202ENST00000481739 RBM14Q96PK6 669 aaKnown RBP12.44□□□□□ -0.42
RXRA-202ENST00000481739 HIGD1AQ9Y241 93 aa12.44□□□□□ -0.42
RXRA-202ENST00000481739 PDZD2O15018 2839 aa12.44□□□□□ -0.42
RXRA-202ENST00000481739 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.44□□□□□ -0.425e-7■□□□□ 10.1
RXRA-202ENST00000481739 HELTA6NFD8 242 aa12.44□□□□□ -0.42
RXRA-202ENST00000481739 C5orf52A6NGY3 159 aa12.44□□□□□ -0.42
RXRA-202ENST00000481739 HIST1H1BP16401 226 aaKnown RBP12.44□□□□□ -0.42
RXRA-202ENST00000481739 GATA3P23771 443 aa12.44□□□□□ -0.42
RXRA-202ENST00000481739 SUMO1P63165 101 aaKnown RBP12.44□□□□□ -0.42
RXRA-202ENST00000481739 MORN5Q5VZ52 161 aa12.44□□□□□ -0.42
RXRA-202ENST00000481739 WFDC11Q8NEX6 87 aa12.44□□□□□ -0.42
RXRA-202ENST00000481739 FXYD5Q96DB9 178 aa12.44□□□□□ -0.42
RXRA-202ENST00000481739 CR1P17927 2039 aa12.44□□□□□ -0.42
RXRA-202ENST00000481739 PRRC2AP48634 2157 aaKnown RBP12.43□□□□□ -0.42
RXRA-202ENST00000481739 CCDC168Q8NDH2 2452 aa12.43□□□□□ -0.42
RXRA-202ENST00000481739 TRAV5A0A0B4J249 113 aa12.43□□□□□ -0.42
RXRA-202ENST00000481739 TRAV40A0A0B4J280 105 aa12.43□□□□□ -0.42
RXRA-202ENST00000481739 GGCTO75223 188 aaKnown RBP12.43□□□□□ -0.42
RXRA-202ENST00000481739 RD3LP0DJH9 198 aa12.43□□□□□ -0.42
RXRA-202ENST00000481739 PSG1P11464 419 aa12.43□□□□□ -0.42
RXRA-202ENST00000481739 CRYBB3P26998 211 aa12.43□□□□□ -0.42
RXRA-202ENST00000481739 GNG4P50150 75 aa12.43□□□□□ -0.42
RXRA-202ENST00000481739 TAS2R60P59551 318 aa12.43□□□□□ -0.42
RXRA-202ENST00000481739 SRD5A3Q9H8P0 318 aa12.43□□□□□ -0.42
RXRA-202ENST00000481739 RNF24Q9Y225 148 aa12.43□□□□□ -0.42
RXRA-202ENST00000481739 IGHV3-21A0A0B4J1V1 117 aa12.42□□□□□ -0.42
RXRA-202ENST00000481739 IGHV7-81A0A0B4J1V7 117 aa12.42□□□□□ -0.42
RXRA-202ENST00000481739 TOMM40O96008 361 aa12.42□□□□□ -0.42
RXRA-202ENST00000481739 IGKV1-17P01599 117 aa12.42□□□□□ -0.42
RXRA-202ENST00000481739 IGHV4-31P0DP07 118 aa12.42□□□□□ -0.42
RXRA-202ENST00000481739 MFAP4P55083 255 aa12.42□□□□□ -0.42
RXRA-202ENST00000481739 YPEL3P61236 119 aaPredicted RBP12.42□□□□□ -0.42
RXRA-202ENST00000481739 FOXL1Q12952 345 aa12.42□□□□□ -0.42
RXRA-202ENST00000481739 KLK9Q2XQG4 91 aa12.42□□□□□ -0.42
RXRA-202ENST00000481739 TIGITQ495A1 244 aa12.42□□□□□ -0.42
RXRA-202ENST00000481739 SMUG1Q53HV7 270 aa12.42□□□□□ -0.42
RXRA-202ENST00000481739 ASPHD1Q5U4P2 390 aa12.42□□□□□ -0.42
RXRA-202ENST00000481739 RUSC1-AS1Q66K80 236 aa12.42□□□□□ -0.42
RXRA-202ENST00000481739 TEX38Q6PEX7 206 aa12.42□□□□□ -0.42
RXRA-202ENST00000481739 OCC1Q8TAD7 63 aa12.42□□□□□ -0.42
RXRA-202ENST00000481739 FAM103A1Q9BTL3 118 aaKnown RBP12.42□□□□□ -0.42
RXRA-202ENST00000481739 TMEM14CQ9P0S9 112 aa12.42□□□□□ -0.42
RXRA-202ENST00000481739 KLK9Q9UKQ9 250 aa12.42□□□□□ -0.42
RXRA-202ENST00000481739 TRAV9-1A0A075B6T8 112 aa12.41□□□□□ -0.42
RXRA-202ENST00000481739 IGHV1-69DA0A0B4J2H0 117 aa12.41□□□□□ -0.42
RXRA-202ENST00000481739 PPP5D1E7EU14 171 aa12.41□□□□□ -0.42
RXRA-202ENST00000481739 AP4M1O00189 453 aa12.41□□□□□ -0.42
RXRA-202ENST00000481739 UBE2CO00762 179 aa12.41□□□□□ -0.42
RXRA-202ENST00000481739 IGHV1-69P01742 117 aa12.41□□□□□ -0.42
RXRA-202ENST00000481739 TYMSP04818 313 aa12.41□□□□□ -0.42
RXRA-202ENST00000481739 FCGR2BP31994 310 aaPredicted RBP12.41□□□□□ -0.42
RXRA-202ENST00000481739 FAM3BP58499 235 aaPredicted RBP12.41□□□□□ -0.42
RXRA-202ENST00000481739 NDPQ00604 133 aa12.41□□□□□ -0.42
RXRA-202ENST00000481739 FANCD2OSQ96PS1 177 aa12.41□□□□□ -0.42
RXRA-202ENST00000481739 TXN2Q99757 166 aa12.41□□□□□ -0.42
RXRA-202ENST00000481739 CDC42EP3Q9UKI2 254 aa12.41□□□□□ -0.42
RXRA-202ENST00000481739 PYYP10082 97 aa12.41□□□□□ -0.42
RXRA-202ENST00000481739 FBLN7Q53RD9 439 aa12.41□□□□□ -0.42
RXRA-202ENST00000481739 BRD3OSQ6XYD6 125 aa12.41□□□□□ -0.42
RXRA-202ENST00000481739 PIP4P2Q8N4L2 257 aa12.41□□□□□ -0.42
RXRA-202ENST00000481739 OR10G8Q8NGN5 311 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms