RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 MGAMO43451 1857 aa7.82□□□□□ -1.16
GARNL3-216ENST00000481242 TRGV11A0A075B6L2 103 aa7.82□□□□□ -1.16
GARNL3-216ENST00000481242 IGHV1-3A0A0C4DH29 117 aa7.82□□□□□ -1.16
GARNL3-216ENST00000481242 TEX38Q6PEX7 206 aa7.82□□□□□ -1.16
GARNL3-216ENST00000481242 Q6ZS49 121 aa7.82□□□□□ -1.16
GARNL3-216ENST00000481242 RARRES2Q99969 163 aa7.82□□□□□ -1.16
GARNL3-216ENST00000481242 C1QTNF9BB2RNN3 333 aa7.82□□□□□ -1.16
GARNL3-216ENST00000481242 NMUP48645 174 aa7.82□□□□□ -1.16
GARNL3-216ENST00000481242 C5orf64Q2M2E5 130 aa7.82□□□□□ -1.16
GARNL3-216ENST00000481242 C10orf91Q5T1B1 145 aa7.82□□□□□ -1.16
GARNL3-216ENST00000481242 GFI1Q99684 422 aa7.82□□□□□ -1.16
GARNL3-216ENST00000481242 A0A1W2PRX2 142 aa7.82□□□□□ -1.16
GARNL3-216ENST00000481242 IGF2-ASQ6U949 168 aa7.82□□□□□ -1.16
GARNL3-216ENST00000481242 ZNF664Q8N3J9 261 aa7.82□□□□□ -1.16
GARNL3-216ENST00000481242 C5orf30Q96GV9 206 aa7.82□□□□□ -1.16
GARNL3-216ENST00000481242 RNF126Q9BV68 326 aa7.82□□□□□ -1.16
GARNL3-216ENST00000481242 DOCK7Q96N67 2140 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 M0R381 172 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 AMBPP02760 352 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 SRD5A1P18405 259 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 SRIP30626 198 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 TMEM136Q6ZRR5 245 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 FER1L6-AS1Q8NA97 138 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 DPH3Q96FX2 82 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 ATP6V0BQ99437 205 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 RPP21Q9H633 154 aaKnown RBP7.81□□□□□ -1.16
GARNL3-216ENST00000481242 CRIM1Q9NZV1 1036 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 TRBV7-1A0A0A6YYK4 115 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 H3BRM9 83 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 SNHG12Q9BXW3 62 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 PNRC2Q9NPJ4 139 aaKnown RBP7.81□□□□□ -1.16
GARNL3-216ENST00000481242 GBF1Q92538 1859 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 H3BUX3 64 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 SUMO2P61956 95 aaKnown RBP7.81□□□□□ -1.16
GARNL3-216ENST00000481242 CCL20P78556 96 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 TFF3Q07654 80 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 IL36BQ9NZH7 164 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 COX11Q9Y6N1 276 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 TCF20Q9UGU0 1960 aaKnown RBP7.81□□□□□ -1.16
GARNL3-216ENST00000481242 LY6G6EA0A0G2JKS1 128 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 EREGO14944 169 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 SRP19P09132 144 aaKnown RBP7.81□□□□□ -1.16
GARNL3-216ENST00000481242 MEIG1Q5JSS6 88 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 OR4D5Q8NGN0 318 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 S4R3C0 116 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 U3KQA8 63 aa7.81□□□□□ -1.16
GARNL3-216ENST00000481242 PRSS2P07478 247 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 LHFPL1Q86WI0 220 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 OR13C6PQ8NH95 151 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 RNF166Q96A37 237 aaPredicted RBP7.8□□□□□ -1.16
GARNL3-216ENST00000481242 C1QTNF4Q9BXJ3 329 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 CST9LQ9H4G1 147 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 MBNL3Q9NUK0 354 aaKnown RBP7.8□□□□□ -1.16
GARNL3-216ENST00000481242 ZFHX2Q9C0A1 2572 aaPredicted RBP7.8□□□□□ -1.16
GARNL3-216ENST00000481242 A6NNC1 897 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 PSPNO60542 156 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 PPBPP02775 128 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 CACNG7P62955 275 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 PRELID3AQ96N28 172 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 SSBP4Q9BWG4 385 aaPredicted RBP7.8□□□□□ -1.16
GARNL3-216ENST00000481242 ZNF407Q9C0G0 2248 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 IGHV3-66A0A0C4DH42 116 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 OR11H12B2RN74 326 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 J3QLI3 93 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 MMP23AO75900 390 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 MSMBP08118 114 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 SMIM13P0DJ93 91 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 GATA4P43694 442 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 OR11H1Q8NG94 326 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 OR11H2Q8NH07 326 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 WDR81Q562E7 1941 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 GHRHP01286 108 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 RIPPLY3P57055 190 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 MIR17HGQ75NE6 70 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 CD177Q8N6Q3 437 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 MRAP2Q96G30 205 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 GAFA1Q96PS6 74 aa7.8□□□□□ -1.16
GARNL3-216ENST00000481242 FAM223BA6NKX1 122 aa7.79□□□□□ -1.16
GARNL3-216ENST00000481242 E7EQL1 145 aa7.79□□□□□ -1.16
GARNL3-216ENST00000481242 BUB1B-PAK6H3BSN5 160 aa7.79□□□□□ -1.16
GARNL3-216ENST00000481242 BIVMQ86UB2 503 aa7.79□□□□□ -1.16
GARNL3-216ENST00000481242 FAM223AQ8IWN6 122 aa7.79□□□□□ -1.16
GARNL3-216ENST00000481242 CITED2Q99967 270 aaPredicted RBP7.79□□□□□ -1.16
GARNL3-216ENST00000481242 PRDM13Q9H4Q3 707 aa7.79□□□□□ -1.16
GARNL3-216ENST00000481242 EPDR1Q9UM22 224 aa7.79□□□□□ -1.16
GARNL3-216ENST00000481242 NOTCH2Q04721 2471 aa7.79□□□□□ -1.16
GARNL3-216ENST00000481242 GZMBP10144 247 aa7.79□□□□□ -1.16
GARNL3-216ENST00000481242 C15orf32Q32M92 178 aa7.79□□□□□ -1.16
GARNL3-216ENST00000481242 C9orf139Q6ZV77 190 aa7.79□□□□□ -1.16
GARNL3-216ENST00000481242 ORMDL3Q8N138 153 aa7.79□□□□□ -1.16
GARNL3-216ENST00000481242 Q8TCH9 128 aa7.79□□□□□ -1.16
GARNL3-216ENST00000481242 BPESC1Q9GZL8 116 aa7.79□□□□□ -1.16
GARNL3-216ENST00000481242 SPCS1Q9Y6A9 102 aa7.79□□□□□ -1.16
GARNL3-216ENST00000481242 NPSP0C0P6 89 aa7.79□□□□□ -1.16
GARNL3-216ENST00000481242 SRSF6Q13247 344 aaKnown RBP7.79□□□□□ -1.16
GARNL3-216ENST00000481242 EFNB3Q15768 340 aa7.79□□□□□ -1.16
GARNL3-216ENST00000481242 ASCL4Q6XD76 172 aa7.79□□□□□ -1.16
GARNL3-216ENST00000481242 F2Z2F3 143 aa7.78□□□□□ -1.16
GARNL3-216ENST00000481242 PRSS33Q8NF86 280 aa7.78□□□□□ -1.16
GARNL3-216ENST00000481242 TRGV9Q99603 122 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms