RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 ARHGEF28Q8N1W1 1705 aaKnown RBP0.95□□□□□ -2.26
CCDC58-204ENST00000479414 LAMA4Q16363 1823 aa0.95□□□□□ -2.26
CCDC58-204ENST00000479414 CCDC160A6NGH7 325 aa0.95□□□□□ -2.26
CCDC58-204ENST00000479414 LINC00526Q96FQ7 95 aa0.95□□□□□ -2.26
CCDC58-204ENST00000479414 BCL2L10Q9HD36 194 aa0.95□□□□□ -2.26
CCDC58-204ENST00000479414 MYH10P35580 1976 aa0.95□□□□□ -2.26
CCDC58-204ENST00000479414 ADGRB2O60241 1585 aa0.95□□□□□ -2.26
CCDC58-204ENST00000479414 INE1O15225 51 aa0.94□□□□□ -2.26
CCDC58-204ENST00000479414 ERVS71-1P61550 626 aa0.94□□□□□ -2.26
CCDC58-204ENST00000479414 CCL7P80098 99 aa0.94□□□□□ -2.26
CCDC58-204ENST00000479414 SPRNQ5BIV9 151 aa0.94□□□□□ -2.26
CCDC58-204ENST00000479414 GDF5OSQ5U4N7 250 aa0.94□□□□□ -2.26
CCDC58-204ENST00000479414 SLAMF6Q96DU3 332 aa0.94□□□□□ -2.26
CCDC58-204ENST00000479414 SIGMAR1Q99720 223 aa0.94□□□□□ -2.26
CCDC58-204ENST00000479414 TVP23BQ9NYZ1 205 aa0.94□□□□□ -2.26
CCDC58-204ENST00000479414 SLC22A13Q9Y226 551 aa0.94□□□□□ -2.26
CCDC58-204ENST00000479414 OBSL1O75147 1896 aa0.94□□□□□ -2.26
CCDC58-204ENST00000479414 HEATR1Q9H583 2144 aaKnown RBP0.94□□□□□ -2.26
CCDC58-204ENST00000479414 C7orf71A4D174 169 aa0.93□□□□□ -2.26
CCDC58-204ENST00000479414 ZNF736B4DX44 427 aaPredicted RBP0.93□□□□□ -2.26
CCDC58-204ENST00000479414 CYB5BO43169 146 aa0.93□□□□□ -2.26
CCDC58-204ENST00000479414 PROSCO94903 275 aa0.93□□□□□ -2.26
CCDC58-204ENST00000479414 GADD45GO95257 159 aa0.93□□□□□ -2.26
CCDC58-204ENST00000479414 RHOBP62745 196 aa0.93□□□□□ -2.26
CCDC58-204ENST00000479414 DYNLT1P63172 113 aa0.93□□□□□ -2.26
CCDC58-204ENST00000479414 LINC00301Q8NCQ3 95 aa0.93□□□□□ -2.26
CCDC58-204ENST00000479414 NHP2Q9NX24 153 aaKnown RBP0.93□□□□□ -2.26
CCDC58-204ENST00000479414 RIMBP3CA6NJZ7 1639 aa0.93□□□□□ -2.26
CCDC58-204ENST00000479414 RIMBP3BA6NNM3 1639 aa0.93□□□□□ -2.26
CCDC58-204ENST00000479414 RIMBP3Q9UFD9 1639 aa0.93□□□□□ -2.26
CCDC58-204ENST00000479414 PRB4P10163 310 aaPredicted RBP0.92□□□□□ -2.26
CCDC58-204ENST00000479414 PRADC1Q9BSG0 188 aa0.92□□□□□ -2.26
CCDC58-204ENST00000479414 TLNRD1Q9H1K6 362 aa0.92□□□□□ -2.26
CCDC58-204ENST00000479414 CTXN2P0C2S0 81 aa0.91□□□□□ -2.26
CCDC58-204ENST00000479414 SOSTDC1Q6X4U4 206 aa0.91□□□□□ -2.26
CCDC58-204ENST00000479414 DGCR14Q96DF8 476 aaKnown RBP0.91□□□□□ -2.26
CCDC58-204ENST00000479414 C6orf62Q9GZU0 229 aaPredicted RBP0.91□□□□□ -2.26
CCDC58-204ENST00000479414 RNF122Q9H9V4 155 aa0.91□□□□□ -2.26
CCDC58-204ENST00000479414 CHCHD2Q9Y6H1 151 aaPredicted RBP0.91□□□□□ -2.26
CCDC58-204ENST00000479414 KIAA1549Q9HCM3 1950 aa0.9□□□□□ -2.26
CCDC58-204ENST00000479414 NCOA1Q15788 1441 aa0.9□□□□□ -2.26
CCDC58-204ENST00000479414 KIF1BO60333 1816 aa0.9□□□□□ -2.27
CCDC58-204ENST00000479414 OR7C1O76099 320 aaPredicted RBP0.9□□□□□ -2.27
CCDC58-204ENST00000479414 AP3S2P59780 193 aa0.9□□□□□ -2.27
CCDC58-204ENST00000479414 Q8N6K4 173 aa0.9□□□□□ -2.27
CCDC58-204ENST00000479414 FAM172AQ8WUF8 416 aa0.9□□□□□ -2.27
CCDC58-204ENST00000479414 RASL12Q9NYN1 266 aa0.9□□□□□ -2.27
CCDC58-204ENST00000479414 E9PCH4 1651 aa0.89□□□□□ -2.27
CCDC58-204ENST00000479414 RTL1A6NKG5 1358 aa0.89□□□□□ -2.27
CCDC58-204ENST00000479414 TRAV4A0A0B4J268 109 aa0.89□□□□□ -2.27
CCDC58-204ENST00000479414 FAM159BA6NKW6 160 aa0.89□□□□□ -2.27
CCDC58-204ENST00000479414 B4DSR2 109 aa0.89□□□□□ -2.27
CCDC58-204ENST00000479414 CCL25O15444 150 aa0.89□□□□□ -2.27
CCDC58-204ENST00000479414 CYBAP13498 195 aa0.89□□□□□ -2.27
CCDC58-204ENST00000479414 PIGPP57054 158 aa0.89□□□□□ -2.27
CCDC58-204ENST00000479414 MPV17LQ2QL34 196 aa0.89□□□□□ -2.27
CCDC58-204ENST00000479414 S100A7AQ86SG5 101 aa0.89□□□□□ -2.27
CCDC58-204ENST00000479414 SLC30A7Q8NEW0 376 aa0.89□□□□□ -2.27
CCDC58-204ENST00000479414 OR2T10Q8NGZ9 312 aa0.89□□□□□ -2.27
CCDC58-204ENST00000479414 TMEM126AQ9H061 195 aa0.89□□□□□ -2.27
CCDC58-204ENST00000479414 PLXNA4Q9HCM2 1894 aa0.88□□□□□ -2.27
CCDC58-204ENST00000479414 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.88□□□□□ -2.27
CCDC58-204ENST00000479414 ATP5G3P48201 142 aa0.88□□□□□ -2.27
CCDC58-204ENST00000479414 EIF5AP63241 154 aaKnown RBP0.88□□□□□ -2.27
CCDC58-204ENST00000479414 ERP29P30040 261 aaKnown RBP0.87□□□□□ -2.27
CCDC58-204ENST00000479414 PDZD9Q8IXQ8 264 aa0.87□□□□□ -2.27
CCDC58-204ENST00000479414 OR11H6Q8NGC7 330 aa0.87□□□□□ -2.27
CCDC58-204ENST00000479414 PATE1Q8WXA2 126 aa0.87□□□□□ -2.27
CCDC58-204ENST00000479414 AMELYQ99218 206 aa0.87□□□□□ -2.27
CCDC58-204ENST00000479414 KIFC1Q9BW19 673 aa0.87□□□□□ -2.27
CCDC58-204ENST00000479414 PARVBQ9HBI1 364 aa0.87□□□□□ -2.27
CCDC58-204ENST00000479414 C14orf132Q9NPU4 83 aa0.87□□□□□ -2.27
CCDC58-204ENST00000479414 CNTRLQ7Z7A1 2325 aa0.87□□□□□ -2.27
CCDC58-204ENST00000479414 PCF11O94913 1555 aaKnown RBP0.87□□□□□ -2.27
CCDC58-204ENST00000479414 UNC13CQ8NB66 2214 aa0.87□□□□□ -2.27
CCDC58-204ENST00000479414 MED12Q93074 2177 aa0.86□□□□□ -2.27
CCDC58-204ENST00000479414 TIMM17BO60830 172 aa0.86□□□□□ -2.27
CCDC58-204ENST00000479414 DNAL4O96015 105 aa0.86□□□□□ -2.27
CCDC58-204ENST00000479414 SRP14P37108 136 aaKnown RBP0.86□□□□□ -2.27
CCDC58-204ENST00000479414 ANP32AP39687 249 aaKnown RBP0.86□□□□□ -2.27
CCDC58-204ENST00000479414 RRN3P1Q2M238 152 aa0.86□□□□□ -2.27
CCDC58-204ENST00000479414 TEX47Q8TBZ9 253 aa0.86□□□□□ -2.27
CCDC58-204ENST00000479414 TAS2R7Q9NYW3 318 aa0.86□□□□□ -2.27
CCDC58-204ENST00000479414 CCL16O15467 120 aa0.85□□□□□ -2.27
CCDC58-204ENST00000479414 DHFRP00374 187 aa0.85□□□□□ -2.27
CCDC58-204ENST00000479414 KRR1Q13601 381 aaKnown RBP0.85□□□□□ -2.27
CCDC58-204ENST00000479414 KRTAP19-3Q7Z4W3 81 aa0.85□□□□□ -2.27
CCDC58-204ENST00000479414 MNS1Q8NEH6 495 aa0.85□□□□□ -2.27
CCDC58-204ENST00000479414 OR2T35Q8NGX2 323 aa0.85□□□□□ -2.27
CCDC58-204ENST00000479414 GNPDA2Q8TDQ7 276 aa0.85□□□□□ -2.27
CCDC58-204ENST00000479414 BORCS5Q969J3 196 aa0.85□□□□□ -2.27
CCDC58-204ENST00000479414 FAM32AQ9Y421 112 aaKnown RBP0.85□□□□□ -2.27
CCDC58-204ENST00000479414 COL1A1P02452 1464 aaPredicted RBP0.85□□□□□ -2.27
CCDC58-204ENST00000479414 ALPK3Q96L96 1907 aa0.84□□□□□ -2.27
CCDC58-204ENST00000479414 J3QRK9 145 aa0.84□□□□□ -2.27
CCDC58-204ENST00000479414 KLF7O75840 302 aaPredicted RBP0.84□□□□□ -2.27
CCDC58-204ENST00000479414 IFNA6P05013 189 aa0.84□□□□□ -2.27
CCDC58-204ENST00000479414 CST2P09228 141 aa0.84□□□□□ -2.27
CCDC58-204ENST00000479414 LIN52Q52LA3 116 aa0.84□□□□□ -2.27
CCDC58-204ENST00000479414 LYRM7Q5U5X0 104 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms