RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 SOX21Q9Y651 276 aaPredicted RBP17.19■□□□□ 0.34
SDF4-206ENST00000478938 C5orf67F2Z3F1 127 aa17.18■□□□□ 0.34
SDF4-206ENST00000478938 RPL39P5Q59GN2 51 aa17.18■□□□□ 0.34
SDF4-206ENST00000478938 TMEM240Q5SV17 173 aa17.18■□□□□ 0.34
SDF4-206ENST00000478938 SYT8Q8NBV8 401 aa17.18■□□□□ 0.34
SDF4-206ENST00000478938 COQ2Q96H96 371 aa17.18■□□□□ 0.34
SDF4-206ENST00000478938 IGLV3-12A0A075B6K2 115 aa17.18■□□□□ 0.34
SDF4-206ENST00000478938 IGHV1OR21-1A0A087WYE8 117 aa17.18■□□□□ 0.34
SDF4-206ENST00000478938 E9PLD3 99 aa17.18■□□□□ 0.34
SDF4-206ENST00000478938 HERV-K104P63124 156 aa17.18■□□□□ 0.34
SDF4-206ENST00000478938 ZNF146Q15072 292 aa17.18■□□□□ 0.34
SDF4-206ENST00000478938 LGALS9BQ3B8N2 356 aa17.18■□□□□ 0.34
SDF4-206ENST00000478938 LGALS9CQ6DKI2 356 aa17.18■□□□□ 0.34
SDF4-206ENST00000478938 TTC9CQ8N5M4 171 aa17.18■□□□□ 0.34
SDF4-206ENST00000478938 DEFB119Q8N690 84 aa17.18■□□□□ 0.34
SDF4-206ENST00000478938 ENY2Q9NPA8 101 aa17.18■□□□□ 0.34
SDF4-206ENST00000478938 C16orf97H3BN30 126 aa17.17■□□□□ 0.34
SDF4-206ENST00000478938 GGNQ86UU5 652 aa17.17■□□□□ 0.34
SDF4-206ENST00000478938 GPR82Q96P67 336 aa17.17■□□□□ 0.34
SDF4-206ENST00000478938 DCTN5Q9BTE1 182 aa17.17■□□□□ 0.34
SDF4-206ENST00000478938 PRSS22Q9GZN4 317 aa17.17■□□□□ 0.34
SDF4-206ENST00000478938 POLDIP2Q9Y2S7 368 aa17.17■□□□□ 0.34
SDF4-206ENST00000478938 TCRBV4S1A1TA0A5B7 111 aa17.17■□□□□ 0.34
SDF4-206ENST00000478938 C3AR1Q16581 482 aa17.17■□□□□ 0.34
SDF4-206ENST00000478938 OR13A1Q8NGR1 328 aa17.17■□□□□ 0.34
SDF4-206ENST00000478938 C15orf61A6NNL5 157 aa17.16■□□□□ 0.34
SDF4-206ENST00000478938 MOSP00540 346 aa17.16■□□□□ 0.34
SDF4-206ENST00000478938 IGLL5B9A064 214 aa17.16■□□□□ 0.34
SDF4-206ENST00000478938 IFI27P40305 119 aaPredicted RBP17.16■□□□□ 0.34
SDF4-206ENST00000478938 GAGE13Q4V321 117 aa17.16■□□□□ 0.34
SDF4-206ENST00000478938 ITLN1Q8WWA0 313 aa17.16■□□□□ 0.34
SDF4-206ENST00000478938 DOCK7Q96N67 2140 aa17.16■□□□□ 0.34
SDF4-206ENST00000478938 PAXXQ9BUH6 204 aa17.16■□□□□ 0.34
SDF4-206ENST00000478938 TRIOO75962 3097 aa17.16■□□□□ 0.34
SDF4-206ENST00000478938 NPIPB6E9PJ23 425 aa17.15■□□□□ 0.34
SDF4-206ENST00000478938 WNT9BO14905 357 aa17.15■□□□□ 0.34
SDF4-206ENST00000478938 CHAC1Q9BUX1 264 aa17.15■□□□□ 0.34
SDF4-206ENST00000478938 PRO0461Q9UI25 63 aa17.15■□□□□ 0.34
SDF4-206ENST00000478938 CYSLTR1Q9Y271 337 aa17.15■□□□□ 0.34
SDF4-206ENST00000478938 LOC389332A0A1B0GUA5 103 aa17.15■□□□□ 0.34
SDF4-206ENST00000478938 FHL3Q13643 280 aa17.15■□□□□ 0.34
SDF4-206ENST00000478938 XGP55808 180 aa17.14■□□□□ 0.33
SDF4-206ENST00000478938 B3GALT5-AS1P59052 145 aa17.14■□□□□ 0.33
SDF4-206ENST00000478938 C17orf82Q86X59 251 aaPredicted RBP17.14■□□□□ 0.33
SDF4-206ENST00000478938 PLXDC1Q8IUK5 500 aa17.14■□□□□ 0.33
SDF4-206ENST00000478938 OSR1Q8TAX0 266 aaPredicted RBP17.14■□□□□ 0.33
SDF4-206ENST00000478938 IGKV2D-26A0A0A0MRZ7 120 aa17.14■□□□□ 0.33
SDF4-206ENST00000478938 A0A1B0GWB2 263 aa17.14■□□□□ 0.33
SDF4-206ENST00000478938 B5MCH6 92 aa17.14■□□□□ 0.33
SDF4-206ENST00000478938 Q8IYB0 196 aa17.14■□□□□ 0.33
SDF4-206ENST00000478938 RTL8AQ9BWD3 113 aa17.14■□□□□ 0.33
SDF4-206ENST00000478938 FRYLO94915 3013 aa17.14■□□□□ 0.33
SDF4-206ENST00000478938 APOMO95445 188 aa17.13■□□□□ 0.33
SDF4-206ENST00000478938 SLC25A5P05141 298 aaKnown RBP17.13■□□□□ 0.33
SDF4-206ENST00000478938 GRPP07492 148 aa17.13■□□□□ 0.33
SDF4-206ENST00000478938 RPRMLQ8N4K4 120 aa17.13■□□□□ 0.33
SDF4-206ENST00000478938 ZNF414Q96IQ9 312 aa17.13■□□□□ 0.33
SDF4-206ENST00000478938 IGFLR1Q9H665 355 aa17.13■□□□□ 0.33
SDF4-206ENST00000478938 TNCP24821 2201 aa17.13■□□□□ 0.33
SDF4-206ENST00000478938 C19orf71A6NCJ1 209 aa17.13■□□□□ 0.33
SDF4-206ENST00000478938 SRRM4A7MD48 611 aaKnown RBP17.13■□□□□ 0.33
SDF4-206ENST00000478938 PLAUP00749 431 aa17.13■□□□□ 0.33
SDF4-206ENST00000478938 MLST8Q9BVC4 326 aa17.13■□□□□ 0.33
SDF4-206ENST00000478938 DKK2Q9UBU2 259 aa17.13■□□□□ 0.33
SDF4-206ENST00000478938 CEP192Q8TEP8 1941 aa17.12■□□□□ 0.33
SDF4-206ENST00000478938 TRBV7-9A0A0J9YWB2 115 aa17.12■□□□□ 0.33
SDF4-206ENST00000478938 LAMTOR5O43504 91 aa17.12■□□□□ 0.33
SDF4-206ENST00000478938 HSPE1P61604 102 aaKnown RBP17.12■□□□□ 0.33
SDF4-206ENST00000478938 TMEM164Q5U3C3 297 aa17.12■□□□□ 0.33
SDF4-206ENST00000478938 ZNF502Q8TBZ5 544 aa17.12■□□□□ 0.33
SDF4-206ENST00000478938 ANAPC13Q9BS18 74 aa17.12■□□□□ 0.33
SDF4-206ENST00000478938 MRPL32Q9BYC8 188 aaKnown RBP17.12■□□□□ 0.33
SDF4-206ENST00000478938 DNPH1O43598 174 aa17.12■□□□□ 0.33
SDF4-206ENST00000478938 CT83Q5H943 113 aa17.12■□□□□ 0.33
SDF4-206ENST00000478938 WFDC3Q8IUB2 231 aa17.12■□□□□ 0.33
SDF4-206ENST00000478938 A0A1W2PPC4 97 aa17.11■□□□□ 0.33
SDF4-206ENST00000478938 HAX1O00165 279 aa17.11■□□□□ 0.33
SDF4-206ENST00000478938 Q6ZUT4 128 aa17.11■□□□□ 0.33
SDF4-206ENST00000478938 CXorf67Q86X51 503 aaPredicted RBP17.11■□□□□ 0.33
SDF4-206ENST00000478938 DAZAP1Q96EP5 407 aaKnown RBP17.11■□□□□ 0.33
SDF4-206ENST00000478938 S1PR3Q99500 378 aa17.11■□□□□ 0.33
SDF4-206ENST00000478938 EPDR1Q9UM22 224 aa17.11■□□□□ 0.33
SDF4-206ENST00000478938 C10orf142B7Z368 130 aa17.11■□□□□ 0.33
SDF4-206ENST00000478938 TNFRSF13BO14836 293 aaPredicted RBP17.11■□□□□ 0.33
SDF4-206ENST00000478938 GLMPQ8WWB7 406 aa17.11■□□□□ 0.33
SDF4-206ENST00000478938 SDK1Q7Z5N4 2213 aa17.11■□□□□ 0.33
SDF4-206ENST00000478938 DUX1O43812 170 aa17.1■□□□□ 0.33
SDF4-206ENST00000478938 SSBP2P81877 361 aaPredicted RBP17.1■□□□□ 0.33
SDF4-206ENST00000478938 Q71RC1 249 aaPredicted RBP17.1■□□□□ 0.33
SDF4-206ENST00000478938 FXYD5Q96DB9 178 aa17.1■□□□□ 0.33
SDF4-206ENST00000478938 SRSF8Q9BRL6 282 aaKnown RBP17.1■□□□□ 0.33
SDF4-206ENST00000478938 TM2D2Q9BX73 214 aa17.1■□□□□ 0.33
SDF4-206ENST00000478938 METRNQ9UJH8 293 aa17.1■□□□□ 0.33
SDF4-206ENST00000478938 MRPL33O75394 65 aaKnown RBP17.1■□□□□ 0.33
SDF4-206ENST00000478938 GAGE5Q13069 117 aa17.1■□□□□ 0.33
SDF4-206ENST00000478938 GAGE6Q13070 117 aa17.1■□□□□ 0.33
SDF4-206ENST00000478938 GFRA4Q9GZZ7 299 aa17.1■□□□□ 0.33
SDF4-206ENST00000478938 AKIRIN1Q9H9L7 192 aaPredicted RBP17.1■□□□□ 0.33
SDF4-206ENST00000478938 TMEM14BQ9NUH8 114 aa17.1■□□□□ 0.33
SDF4-206ENST00000478938 FREM2Q5SZK8 3169 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms