RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 NCR2O95944 276 aa15.34■□□□□ 0.05
VARS2-209ENST00000477288 EFNB3Q15768 340 aa15.34■□□□□ 0.05
VARS2-209ENST00000477288 ZNF876PQ49A33 203 aa15.34■□□□□ 0.05
VARS2-209ENST00000477288 TMEM155Q4W5P6 130 aa15.34■□□□□ 0.05
VARS2-209ENST00000477288 GSN-AS1Q9NRJ2 163 aa15.34■□□□□ 0.05
VARS2-209ENST00000477288 B4DSR2 109 aa15.34■□□□□ 0.05
VARS2-209ENST00000477288 TIMP3P35625 211 aa15.34■□□□□ 0.05
VARS2-209ENST00000477288 C20orf204Q6ZNR8 217 aa15.34■□□□□ 0.05
VARS2-209ENST00000477288 ERG28Q9UKR5 140 aa15.34■□□□□ 0.05
VARS2-209ENST00000477288 OTOFQ9HC10 1997 aa15.34■□□□□ 0.05
VARS2-209ENST00000477288 H3BUX3 64 aa15.34■□□□□ 0.05
VARS2-209ENST00000477288 ACTL10Q5JWF8 245 aa15.34■□□□□ 0.05
VARS2-209ENST00000477288 OCC1Q8TAD7 63 aa15.34■□□□□ 0.05
VARS2-209ENST00000477288 TMEM170AQ8WVE7 144 aa15.34■□□□□ 0.05
VARS2-209ENST00000477288 SCN8AQ9UQD0 1980 aa15.33■□□□□ 0.05
VARS2-209ENST00000477288 MS4A6AQ9H2W1 248 aa15.33■□□□□ 0.05
VARS2-209ENST00000477288 DUTP33316 252 aaKnown RBP15.33■□□□□ 0.04
VARS2-209ENST00000477288 F8WEM9 126 aa15.33■□□□□ 0.04
VARS2-209ENST00000477288 A8MWV9 139 aa15.33■□□□□ 0.04
VARS2-209ENST00000477288 F2Z2F3 143 aa15.33■□□□□ 0.04
VARS2-209ENST00000477288 NDPQ00604 133 aa15.33■□□□□ 0.04
VARS2-209ENST00000477288 LAGE3Q14657 143 aa15.33■□□□□ 0.04
VARS2-209ENST00000477288 TMEM200BQ69YZ2 307 aa15.33■□□□□ 0.04
VARS2-209ENST00000477288 TNFRSF14Q92956 283 aa15.33■□□□□ 0.04
VARS2-209ENST00000477288 ZNF48Q96MX3 618 aaPredicted RBP15.33■□□□□ 0.04
VARS2-209ENST00000477288 NTN3O00634 580 aaPredicted RBP15.33■□□□□ 0.04
VARS2-209ENST00000477288 PPBPP02775 128 aa15.33■□□□□ 0.04
VARS2-209ENST00000477288 ORAOV1Q8WV07 137 aa15.32■□□□□ 0.04
VARS2-209ENST00000477288 OSTCQ9NRP0 149 aa15.32■□□□□ 0.04
VARS2-209ENST00000477288 IFI27L1Q96BM0 104 aa15.32■□□□□ 0.04
VARS2-209ENST00000477288 MBNL3Q9NUK0 354 aaKnown RBP15.32■□□□□ 0.04
VARS2-209ENST00000477288 SELLP14151 372 aa15.32■□□□□ 0.04
VARS2-209ENST00000477288 SRSF3P84103 164 aaKnown RBP15.32■□□□□ 0.04
VARS2-209ENST00000477288 C10orf55Q5SWW7 151 aa15.32■□□□□ 0.04
VARS2-209ENST00000477288 C3orf56Q8N813 242 aa15.32■□□□□ 0.04
VARS2-209ENST00000477288 UBE2E2Q96LR5 201 aa15.32■□□□□ 0.04
VARS2-209ENST00000477288 TRAV9-2A0A087WT02 112 aa15.31■□□□□ 0.04
VARS2-209ENST00000477288 IGKV1-9A0A0C4DH69 117 aa15.31■□□□□ 0.04
VARS2-209ENST00000477288 PMS2P5A8MQ11 134 aa15.31■□□□□ 0.04
VARS2-209ENST00000477288 RIF1Q5UIP0 2472 aaKnown RBP15.31■□□□□ 0.04
VARS2-209ENST00000477288 EXOC3-AS1Q8N2X6 119 aa15.31■□□□□ 0.04
VARS2-209ENST00000477288 MTCL1Q9Y4B5 1905 aaKnown RBP15.31■□□□□ 0.04
VARS2-209ENST00000477288 A0A1W2PRE2 83 aa15.31■□□□□ 0.04
VARS2-209ENST00000477288 TPTE2P1Q5T6R2 138 aa15.31■□□□□ 0.04
VARS2-209ENST00000477288 KLHL30-AS1Q8NEE0 82 aa15.31■□□□□ 0.04
VARS2-209ENST00000477288 IGLV3-32A0A0A0MS00 114 aa15.3■□□□□ 0.04
VARS2-209ENST00000477288 IGHV1-8P0DP01 117 aa15.3■□□□□ 0.04
VARS2-209ENST00000477288 FOXG1P55316 489 aaPredicted RBP15.3■□□□□ 0.04
VARS2-209ENST00000477288 ZNF479Q96JC4 524 aa15.3■□□□□ 0.04
VARS2-209ENST00000477288 ZNF562Q6V9R5 426 aa15.3■□□□□ 0.04
VARS2-209ENST00000477288 LCNL1Q6ZST4 164 aa15.3■□□□□ 0.04
VARS2-209ENST00000477288 VSIRQ9H7M9 311 aa15.3■□□□□ 0.04
VARS2-209ENST00000477288 NCOR1O75376 2440 aa15.3■□□□□ 0.04
VARS2-209ENST00000477288 IL18BPO95998 194 aa15.3■□□□□ 0.04
VARS2-209ENST00000477288 RPL36AP83881 106 aaKnown RBP15.3■□□□□ 0.04
VARS2-209ENST00000477288 DMRTC2Q8IXT2 367 aaPredicted RBP15.3■□□□□ 0.04
VARS2-209ENST00000477288 RPL36ALQ969Q0 106 aaKnown RBP15.3■□□□□ 0.04
VARS2-209ENST00000477288 PLSCR4Q9NRQ2 329 aa15.3■□□□□ 0.04
VARS2-209ENST00000477288 GTF3AQ92664 365 aaKnown RBP15.3■□□□□ 0.04
VARS2-209ENST00000477288 SCRT1Q9BWW7 348 aa15.3■□□□□ 0.04
VARS2-209ENST00000477288 IGHV1-3A0A0C4DH29 117 aa15.29■□□□□ 0.04
VARS2-209ENST00000477288 TMEM249Q2WGJ8 235 aa15.29■□□□□ 0.04
VARS2-209ENST00000477288 ZNF625Q96I27 306 aaPredicted RBP15.29■□□□□ 0.04
VARS2-209ENST00000477288 RNF126Q9BV68 326 aa15.29■□□□□ 0.04
VARS2-209ENST00000477288 CRIM1Q9NZV1 1036 aa15.29■□□□□ 0.04
VARS2-209ENST00000477288 PRTN3P24158 256 aa15.29■□□□□ 0.04
VARS2-209ENST00000477288 LSM4Q9Y4Z0 139 aaKnown RBP15.29■□□□□ 0.04
VARS2-209ENST00000477288 ATRAIDQ6UW56 229 aa15.29■□□□□ 0.04
VARS2-209ENST00000477288 TSKUQ8WUA8 353 aa15.29■□□□□ 0.04
VARS2-209ENST00000477288 A0A0G2JNJ9 132 aa15.29■□□□□ 0.04
VARS2-209ENST00000477288 FCN3O75636 299 aa15.29■□□□□ 0.04
VARS2-209ENST00000477288 Q9UFV3 132 aa15.29■□□□□ 0.04
VARS2-209ENST00000477288 SRRM4A7MD48 611 aaKnown RBP15.29■□□□□ 0.04
VARS2-209ENST00000477288 TMEM178BH3BS89 294 aa15.29■□□□□ 0.04
VARS2-209ENST00000477288 PIP4P2Q8N4L2 257 aa15.29■□□□□ 0.04
VARS2-209ENST00000477288 A0A087WV48 116 aa15.28■□□□□ 0.04
VARS2-209ENST00000477288 CITED2Q99967 270 aaPredicted RBP15.28■□□□□ 0.04
VARS2-209ENST00000477288 TMEM238C9JI98 176 aa15.28■□□□□ 0.04
VARS2-209ENST00000477288 TCRAP04437 139 aa15.28■□□□□ 0.04
VARS2-209ENST00000477288 SAMD5Q5TGI4 173 aa15.28■□□□□ 0.04
VARS2-209ENST00000477288 CHCHD1Q96BP2 118 aaKnown RBP15.28■□□□□ 0.04
VARS2-209ENST00000477288 ZNF319Q9P2F9 582 aa15.28■□□□□ 0.04
VARS2-209ENST00000477288 FLVCR1-AS1Q8TAF5 88 aa15.28■□□□□ 0.04
VARS2-209ENST00000477288 SPATA31B1PQ5VZV4 182 aa15.28■□□□□ 0.04
VARS2-209ENST00000477288 TEX43Q6ZNM6 134 aa15.28■□□□□ 0.04
VARS2-209ENST00000477288 LCTP09848 1927 aa15.28■□□□□ 0.04
VARS2-209ENST00000477288 HEATR5BQ9P2D3 2071 aa15.28■□□□□ 0.04
VARS2-209ENST00000477288 D6R8Y8 96 aa15.27■□□□□ 0.04
VARS2-209ENST00000477288 ZNF329Q86UD4 541 aa15.27■□□□□ 0.04
VARS2-209ENST00000477288 C6orf226Q5I0X4 101 aa15.27■□□□□ 0.04
VARS2-209ENST00000477288 GNB1LQ9BYB4 327 aa15.27■□□□□ 0.04
VARS2-209ENST00000477288 SDK2Q58EX2 2172 aa15.27■□□□□ 0.04
VARS2-209ENST00000477288 NAA38Q9BRA0 125 aaKnown RBP15.27■□□□□ 0.04
VARS2-209ENST00000477288 WFDC1Q9HC57 220 aa15.27■□□□□ 0.04
VARS2-209ENST00000477288 RALGAPA2Q2PPJ7 1873 aa15.27■□□□□ 0.03
VARS2-209ENST00000477288 PAQR4Q8N4S7 273 aaPredicted RBP15.27■□□□□ 0.03
VARS2-209ENST00000477288 C1orf159Q96HA4 380 aa15.27■□□□□ 0.03
VARS2-209ENST00000477288 RPUSD1Q9UJJ7 312 aaKnown RBP15.27■□□□□ 0.03
VARS2-209ENST00000477288 LGALS1P09382 135 aaKnown RBP15.27■□□□□ 0.03
VARS2-209ENST00000477288 RPL32P62910 135 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms