RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 RANP62826 216 aaKnown RBP13.12□□□□□ -0.31
TMEM53-208ENST00000476724 OR1B1Q8NGR6 318 aa13.12□□□□□ -0.31
TMEM53-208ENST00000476724 TIMD4Q96H15 378 aa13.12□□□□□ -0.31
TMEM53-208ENST00000476724 MALRD1Q5VYJ5 2156 aa13.12□□□□□ -0.31
TMEM53-208ENST00000476724 ZNF705GA8MUZ8 300 aaPredicted RBP13.12□□□□□ -0.31
TMEM53-208ENST00000476724 TEX22C9J3V5 150 aa13.12□□□□□ -0.31
TMEM53-208ENST00000476724 BAGE2Q86Y30 109 aa13.12□□□□□ -0.31
TMEM53-208ENST00000476724 MOSP00540 346 aa13.11□□□□□ -0.31
TMEM53-208ENST00000476724 TPPP2P59282 170 aa13.11□□□□□ -0.31
TMEM53-208ENST00000476724 FXYD3Q14802 87 aa13.11□□□□□ -0.31
TMEM53-208ENST00000476724 TMEM183BQ1AE95 376 aa13.11□□□□□ -0.31
TMEM53-208ENST00000476724 ZNF843Q8N446 348 aa13.11□□□□□ -0.31
TMEM53-208ENST00000476724 SRSF12Q8WXF0 261 aaKnown RBP13.11□□□□□ -0.31
TMEM53-208ENST00000476724 FBXL15Q9H469 300 aa13.11□□□□□ -0.31
TMEM53-208ENST00000476724 SERTAD4Q9NUC0 356 aa13.11□□□□□ -0.31
TMEM53-208ENST00000476724 NAV3Q8IVL0 2385 aa13.11□□□□□ -0.31
TMEM53-208ENST00000476724 IZUMO1RA6ND01 250 aa13.11□□□□□ -0.31
TMEM53-208ENST00000476724 A6NNC1 897 aa13.11□□□□□ -0.31
TMEM53-208ENST00000476724 NDUFS7O75251 213 aa13.11□□□□□ -0.31
TMEM53-208ENST00000476724 DLX1P56177 255 aa13.11□□□□□ -0.31
TMEM53-208ENST00000476724 RASL11AQ6T310 242 aa13.11□□□□□ -0.31
TMEM53-208ENST00000476724 MS4A10Q96PG2 267 aa13.11□□□□□ -0.31
TMEM53-208ENST00000476724 PRO1933Q9H354 126 aa13.11□□□□□ -0.31
TMEM53-208ENST00000476724 NAT8BQ9UHF3 227 aa13.11□□□□□ -0.31
TMEM53-208ENST00000476724 EPDR1Q9UM22 224 aa13.11□□□□□ -0.31
TMEM53-208ENST00000476724 GRIFINA4D1Z8 144 aa13.1□□□□□ -0.31
TMEM53-208ENST00000476724 NUPR1O60356 82 aa13.1□□□□□ -0.31
TMEM53-208ENST00000476724 HLA-DQA1P01909 254 aa13.1□□□□□ -0.31
TMEM53-208ENST00000476724 AMY1AP04745 511 aa13.1□□□□□ -0.31
TMEM53-208ENST00000476724 NBEAP1P0C6P0 100 aa13.1□□□□□ -0.31
TMEM53-208ENST00000476724 HTR1DP28221 377 aa13.1□□□□□ -0.31
TMEM53-208ENST00000476724 TPTE2P1Q5T6R2 138 aa13.1□□□□□ -0.31
TMEM53-208ENST00000476724 REC114Q7Z4M0 266 aa13.1□□□□□ -0.31
TMEM53-208ENST00000476724 ZNF664Q8N3J9 261 aa13.1□□□□□ -0.31
TMEM53-208ENST00000476724 OR11H6Q8NGC7 330 aa13.1□□□□□ -0.31
TMEM53-208ENST00000476724 NEU4Q8WWR8 484 aaPredicted RBP13.1□□□□□ -0.31
TMEM53-208ENST00000476724 ONECUT1Q9UBC0 465 aa13.1□□□□□ -0.31
TMEM53-208ENST00000476724 PLXNB1O43157 2135 aa13.1□□□□□ -0.31
TMEM53-208ENST00000476724 FLNCQ14315 2725 aa13.1□□□□□ -0.31
TMEM53-208ENST00000476724 EPG5Q9HCE0 2579 aa13.09□□□□□ -0.31
TMEM53-208ENST00000476724 CEACAM3P40198 252 aa13.09□□□□□ -0.31
TMEM53-208ENST00000476724 UBE2G1P62253 170 aa13.09□□□□□ -0.31
TMEM53-208ENST00000476724 PLGLAQ15195 96 aa13.09□□□□□ -0.31
TMEM53-208ENST00000476724 TMEM136Q6ZRR5 245 aa13.09□□□□□ -0.31
TMEM53-208ENST00000476724 LINC00479Q96M42 142 aa13.09□□□□□ -0.31
TMEM53-208ENST00000476724 DPM3Q9P2X0 92 aa13.09□□□□□ -0.31
TMEM53-208ENST00000476724 KLF12Q9Y4X4 402 aa13.09□□□□□ -0.31
TMEM53-208ENST00000476724 SLC25A5P05141 298 aaKnown RBP13.09□□□□□ -0.31
TMEM53-208ENST00000476724 RAB4BP61018 213 aa13.09□□□□□ -0.31
TMEM53-208ENST00000476724 OR10J3Q5JRS4 329 aa13.09□□□□□ -0.31
TMEM53-208ENST00000476724 RUSC1-AS1Q66K80 236 aa13.09□□□□□ -0.31
TMEM53-208ENST00000476724 BAGE3Q86Y29 109 aa13.09□□□□□ -0.31
TMEM53-208ENST00000476724 TMEM190Q8WZ59 177 aa13.09□□□□□ -0.31
TMEM53-208ENST00000476724 MBD6Q96DN6 1003 aa13.09□□□□□ -0.31
TMEM53-208ENST00000476724 GRAMD2BQ96HH9 432 aa13.09□□□□□ -0.31
TMEM53-208ENST00000476724 C14orf144Q96I85 54 aa13.09□□□□□ -0.31
TMEM53-208ENST00000476724 TP53TG3Q9ULZ0 132 aa13.09□□□□□ -0.31
TMEM53-208ENST00000476724 USP9XQ93008 2570 aaPredicted RBP13.08□□□□□ -0.32
TMEM53-208ENST00000476724 A0A1B0GUS0 222 aa13.08□□□□□ -0.32
TMEM53-208ENST00000476724 PGPA6NDG6 321 aa13.08□□□□□ -0.32
TMEM53-208ENST00000476724 M0R1W7 72 aa13.08□□□□□ -0.32
TMEM53-208ENST00000476724 HIGD1AQ9Y241 93 aa13.08□□□□□ -0.32
TMEM53-208ENST00000476724 A8MWP6 167 aa13.08□□□□□ -0.32
TMEM53-208ENST00000476724 I3L2K1 104 aa13.08□□□□□ -0.32
TMEM53-208ENST00000476724 SCGB1D1O95968 90 aa13.08□□□□□ -0.32
TMEM53-208ENST00000476724 APELAP0DMC3 54 aa13.08□□□□□ -0.32
TMEM53-208ENST00000476724 HIST1H1EP10412 219 aaKnown RBP13.08□□□□□ -0.32
TMEM53-208ENST00000476724 C5orf17Q8NAS9 161 aa13.08□□□□□ -0.32
TMEM53-208ENST00000476724 WIPF2Q8TF74 440 aaPredicted RBP13.08□□□□□ -0.32
TMEM53-208ENST00000476724 ZNF331Q9NQX6 463 aaPredicted RBP13.08□□□□□ -0.32
TMEM53-208ENST00000476724 SPTAN1Q13813 2472 aaKnown RBP13.07□□□□□ -0.32
TMEM53-208ENST00000476724 COL12A1Q99715 3063 aa13.07□□□□□ -0.32
TMEM53-208ENST00000476724 TIMM23O14925 209 aa13.07□□□□□ -0.32
TMEM53-208ENST00000476724 SERF1AO75920 110 aa13.07□□□□□ -0.32
TMEM53-208ENST00000476724 FRMD6-AS1P0C7T7 363 aa13.07□□□□□ -0.32
TMEM53-208ENST00000476724 IGLC1P0CG04 106 aa13.07□□□□□ -0.32
TMEM53-208ENST00000476724 GP9P14770 177 aa13.07□□□□□ -0.32
TMEM53-208ENST00000476724 PRB3Q04118 309 aaPredicted RBP13.07□□□□□ -0.32
TMEM53-208ENST00000476724 NHLRC2Q8NBF2 726 aa13.07□□□□□ -0.32
TMEM53-208ENST00000476724 BLNKQ8WV28 456 aa13.07□□□□□ -0.32
TMEM53-208ENST00000476724 ATG101Q9BSB4 218 aa13.07□□□□□ -0.32
TMEM53-208ENST00000476724 WNT10AQ9GZT5 417 aa13.07□□□□□ -0.32
TMEM53-208ENST00000476724 TMEM14CQ9P0S9 112 aa13.07□□□□□ -0.32
TMEM53-208ENST00000476724 ZNF462Q96JM2 2506 aa13.07□□□□□ -0.32
TMEM53-208ENST00000476724 AKAP6Q13023 2319 aa13.07□□□□□ -0.32
TMEM53-208ENST00000476724 ARHGAP32A7KAX9 2087 aa13.07□□□□□ -0.32
TMEM53-208ENST00000476724 DOPEY1Q5JWR5 2465 aa13.07□□□□□ -0.32
TMEM53-208ENST00000476724 TRAV34A0A0B4J273 112 aa13.06□□□□□ -0.32
TMEM53-208ENST00000476724 CNIH1O95406 144 aa13.06□□□□□ -0.32
TMEM53-208ENST00000476724 TCL1AP56279 114 aa13.06□□□□□ -0.32
TMEM53-208ENST00000476724 USF2Q15853 346 aaPredicted RBP13.06□□□□□ -0.32
TMEM53-208ENST00000476724 NUDT10Q8NFP7 164 aa13.06□□□□□ -0.32
TMEM53-208ENST00000476724 NPBQ8NG41 125 aa13.06□□□□□ -0.32
TMEM53-208ENST00000476724 NUDT11Q96G61 164 aa13.06□□□□□ -0.32
TMEM53-208ENST00000476724 FMC1Q96HJ9 113 aa13.06□□□□□ -0.32
TMEM53-208ENST00000476724 GPR82Q96P67 336 aa13.06□□□□□ -0.32
TMEM53-208ENST00000476724 RBM14Q96PK6 669 aaKnown RBP13.06□□□□□ -0.32
TMEM53-208ENST00000476724 NAGKQ9UJ70 344 aa13.06□□□□□ -0.32
TMEM53-208ENST00000476724 NBR2O15453 112 aa13.06□□□□□ -0.32
TMEM53-208ENST00000476724 SPINK4O60575 86 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms