RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 LINC00869P0C866 280 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 IBA57Q5T440 356 aaKnown RBP6.82□□□□□ -1.32
VAPB-205ENST00000476395 FAM214BQ7L5A3 538 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 OR11H1Q8NG94 326 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 OR11H2Q8NH07 326 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 RFESDQ8TAC1 157 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 SIGMAR1Q99720 223 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 B4GALT7Q9UBV7 327 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 POLDIP2Q9Y2S7 368 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 CXorf1O96002 111 aa6.81□□□□□ -1.32
VAPB-205ENST00000476395 CGB3P0DN86 165 aa6.81□□□□□ -1.32
VAPB-205ENST00000476395 CGB7P0DN87 165 aa6.81□□□□□ -1.32
VAPB-205ENST00000476395 WT1P19544 449 aaPredicted RBP6.81□□□□□ -1.32
VAPB-205ENST00000476395 PSG5Q15238 335 aa6.81□□□□□ -1.32
VAPB-205ENST00000476395 TBC1D28Q2M2D7 210 aa6.81□□□□□ -1.32
VAPB-205ENST00000476395 C2orf91Q6ZV80 131 aa6.81□□□□□ -1.32
VAPB-205ENST00000476395 PIP4P2Q8N4L2 257 aa6.81□□□□□ -1.32
VAPB-205ENST00000476395 TMEM70Q9BUB7 260 aa6.81□□□□□ -1.32
VAPB-205ENST00000476395 IFI27L2Q9H2X8 130 aa6.81□□□□□ -1.32
VAPB-205ENST00000476395 FZR1Q9UM11 496 aa6.81□□□□□ -1.32
VAPB-205ENST00000476395 AZU1P20160 251 aa6.81□□□□□ -1.32
VAPB-205ENST00000476395 RPL39P5Q59GN2 51 aa6.81□□□□□ -1.32
VAPB-205ENST00000476395 ZNF503Q96F45 646 aa6.81□□□□□ -1.32
VAPB-205ENST00000476395 TRBV9A0A0B4J1U6 114 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 K7EMI3 77 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 APOA2P02652 100 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 UFSP1Q6NVU6 142 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 H2BFWTQ7Z2G1 175 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 RELNP78509 3460 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 PPIAL4EA0A075B759 164 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 TRGV10A0A0A0MS01 117 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 PPIAL4CA0A0B4J2A2 164 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 IGHV1-24A0A0C4DH33 117 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 CEACAM4O75871 244 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 HLA-DQA1P01909 254 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 PPIAL4FP0DN26 164 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 KIR2DL2P43627 348 aaPredicted RBP6.8□□□□□ -1.32
VAPB-205ENST00000476395 OXLD1Q5BKU9 147 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 CFHR4Q92496 578 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 COMMD5Q9GZQ3 224 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 SCRT2Q9NQ03 307 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 IGKV1OR2-108A0A075B7D4 117 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 PIGBOS1A0A0B4J2F0 54 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 PRR33A8MZF0 331 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 C21orf140B9A014 251 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 SYS1-DBNDD2H3BUS1 97 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 IGLV1-44P01699 117 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 MT-ND6P03923 174 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 ZNF137PP52743 207 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 DUX4L9Q6RFH8 374 aaPredicted RBP6.8□□□□□ -1.32
VAPB-205ENST00000476395 NUP35Q8NFH5 326 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 ZNF331Q9NQX6 463 aaPredicted RBP6.8□□□□□ -1.32
VAPB-205ENST00000476395 TACC2O95359 2948 aa6.8□□□□□ -1.32
VAPB-205ENST00000476395 TRAV9-1A0A075B6T8 112 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 REG1AP05451 166 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 IGFBP2P18065 325 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 OPRK1P41145 380 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 MORN5Q5VZ52 161 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 TEX48A0A1B0GUV7 120 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 SMIM27A0A1W2PRY6 76 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 C9JCJ5 164 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 CD5LO43866 347 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 NCR2O95944 276 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 CECR9P0C854 216 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 PLGLB1Q02325 96 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 Q71RC1 249 aaPredicted RBP6.79□□□□□ -1.32
VAPB-205ENST00000476395 TCF24Q7RTU0 167 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 ABCA1O95477 2261 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 ENSAO43768 121 aaKnown RBP6.79□□□□□ -1.32
VAPB-205ENST00000476395 FCN3O75636 299 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 TNFSF15O95150 251 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 CSN3P07498 182 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 SEC61GP60059 68 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 RPL24P83731 157 aaKnown RBP6.79□□□□□ -1.32
VAPB-205ENST00000476395 C17orf58Q2M2W7 97 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 Q6ZT83 130 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 C11orf52Q96A22 123 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 KCNIP1Q9NZI2 227 aa6.79□□□□□ -1.32
VAPB-205ENST00000476395 TRGV5A0A0B4J1U4 118 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 TRAV5A0A0B4J249 113 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 WIPF1O43516 503 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 GPR183P32249 361 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 RPS20P60866 119 aaKnown RBP6.78□□□□□ -1.32
VAPB-205ENST00000476395 MLANAQ16655 118 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 SEM1Q6ZVN7 128 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 GTF2H5Q6ZYL4 71 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 C9orf106Q8NAJ2 232 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 PTH2Q96A98 100 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 MRAP2Q96G30 205 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 HSD17B10Q99714 261 aaKnown RBP6.78□□□□□ -1.32
VAPB-205ENST00000476395 HEYLQ9NQ87 328 aaPredicted RBP6.78□□□□□ -1.32
VAPB-205ENST00000476395 DKK4Q9UBT3 224 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 KLF13Q9Y2Y9 288 aaPredicted RBP6.78□□□□□ -1.32
VAPB-205ENST00000476395 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.78□□□□□ -1.32
VAPB-205ENST00000476395 IGHV1-18A0A0C4DH31 117 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 FAM90A9PA6NNJ1 464 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 IGHG3P01860 377 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 PRR20EP86478 221 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 PRR20CP86479 221 aa6.78□□□□□ -1.32
VAPB-205ENST00000476395 PRR20DP86480 221 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms