RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 NACAE9PAV3 2078 aa8.92□□□□□ -0.98
SKA3-206ENST00000475251 FXYD7P58549 80 aa8.91□□□□□ -0.98
SKA3-206ENST00000475251 SAMD13Q5VXD3 122 aa8.91□□□□□ -0.98
SKA3-206ENST00000475251 EBLN2Q6P2I7 272 aa8.91□□□□□ -0.98
SKA3-206ENST00000475251 ZNF709Q8N972 641 aa8.91□□□□□ -0.98
SKA3-206ENST00000475251 SLC24A4Q8NFF2 622 aa8.91□□□□□ -0.98
SKA3-206ENST00000475251 OR4B1Q8NGF8 309 aa8.91□□□□□ -0.98
SKA3-206ENST00000475251 LINC00052Q96N35 136 aa8.91□□□□□ -0.98
SKA3-206ENST00000475251 Q9H521 79 aa8.91□□□□□ -0.98
SKA3-206ENST00000475251 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.91□□□□□ -0.98
SKA3-206ENST00000475251 COPZ2Q9P299 210 aa8.91□□□□□ -0.98
SKA3-206ENST00000475251 CACFD1Q9UGQ2 172 aa8.91□□□□□ -0.98
SKA3-206ENST00000475251 ANKRD65E5RJM6 399 aa8.9□□□□□ -0.98
SKA3-206ENST00000475251 RORCP51449 518 aa8.9□□□□□ -0.98
SKA3-206ENST00000475251 PSG9Q00887 426 aa8.9□□□□□ -0.98
SKA3-206ENST00000475251 AARDQ4LEZ3 155 aa8.9□□□□□ -0.98
SKA3-206ENST00000475251 GDF5OSQ5U4N7 250 aa8.9□□□□□ -0.98
SKA3-206ENST00000475251 OR8G2PQ6IF36 304 aa8.9□□□□□ -0.98
SKA3-206ENST00000475251 RNF125Q96EQ8 232 aa8.9□□□□□ -0.98
SKA3-206ENST00000475251 TMEM208Q9BTX3 173 aa8.9□□□□□ -0.98
SKA3-206ENST00000475251 MAGT1Q9H0U3 335 aa8.9□□□□□ -0.98
SKA3-206ENST00000475251 SCRT2Q9NQ03 307 aa8.9□□□□□ -0.98
SKA3-206ENST00000475251 KLK11Q9UBX7 282 aa8.9□□□□□ -0.98
SKA3-206ENST00000475251 PI3P19957 117 aa8.89□□□□□ -0.99
SKA3-206ENST00000475251 UCP1P25874 307 aa8.89□□□□□ -0.99
SKA3-206ENST00000475251 PAX9P55771 341 aa8.89□□□□□ -0.99
SKA3-206ENST00000475251 CCL18P55774 89 aa8.89□□□□□ -0.99
SKA3-206ENST00000475251 ZNF79Q15937 498 aa8.89□□□□□ -0.99
SKA3-206ENST00000475251 RNASE10Q5GAN6 216 aaKnown RBP8.89□□□□□ -0.99
SKA3-206ENST00000475251 ARRDC1Q8N5I2 433 aa8.89□□□□□ -0.99
SKA3-206ENST00000475251 OR51G1Q8NGK1 321 aa8.89□□□□□ -0.99
SKA3-206ENST00000475251 ZFAND1Q8TCF1 268 aa8.89□□□□□ -0.99
SKA3-206ENST00000475251 NPIPB3Q92617 1050 aa8.89□□□□□ -0.99
SKA3-206ENST00000475251 LYRM9A8MSI8 78 aa8.88□□□□□ -0.99
SKA3-206ENST00000475251 CEBPZOSA8MTT3 80 aa8.88□□□□□ -0.99
SKA3-206ENST00000475251 M0QYG6 137 aa8.88□□□□□ -0.99
SKA3-206ENST00000475251 ISLRO14498 428 aa8.88□□□□□ -0.99
SKA3-206ENST00000475251 APOA1P02647 267 aa8.88□□□□□ -0.99
SKA3-206ENST00000475251 PSG1P11464 419 aa8.88□□□□□ -0.99
SKA3-206ENST00000475251 TBPP20226 339 aa8.88□□□□□ -0.99
SKA3-206ENST00000475251 RPS19P39019 145 aaKnown RBP8.88□□□□□ -0.99
SKA3-206ENST00000475251 NEDD8Q15843 81 aa8.88□□□□□ -0.99
SKA3-206ENST00000475251 C1orf194Q5T5A4 169 aa8.88□□□□□ -0.99
SKA3-206ENST00000475251 LHFPL1Q86WI0 220 aa8.88□□□□□ -0.99
SKA3-206ENST00000475251 SNX29P2Q8IUI4 249 aa8.88□□□□□ -0.99
SKA3-206ENST00000475251 C1orf158Q8N1D5 194 aa8.88□□□□□ -0.99
SKA3-206ENST00000475251 ZNRF2Q8NHG8 242 aa8.88□□□□□ -0.99
SKA3-206ENST00000475251 ACY3Q96HD9 319 aa8.88□□□□□ -0.99
SKA3-206ENST00000475251 PBDC1Q9BVG4 233 aa8.88□□□□□ -0.99
SKA3-206ENST00000475251 SLC35B3Q9H1N7 401 aa8.88□□□□□ -0.99
SKA3-206ENST00000475251 FABP1P07148 127 aa8.87□□□□□ -0.99
SKA3-206ENST00000475251 MEOX2P50222 304 aa8.87□□□□□ -0.99
SKA3-206ENST00000475251 B2MP61769 119 aa8.87□□□□□ -0.99
SKA3-206ENST00000475251 SUPT4H1P63272 117 aaKnown RBP8.87□□□□□ -0.99
SKA3-206ENST00000475251 SP6Q3SY56 376 aa8.87□□□□□ -0.99
SKA3-206ENST00000475251 FAM78BQ5VT40 261 aa8.87□□□□□ -0.99
SKA3-206ENST00000475251 ABHD1Q96SE0 405 aa8.87□□□□□ -0.99
SKA3-206ENST00000475251 WDR12Q9GZL7 423 aaKnown RBP8.87□□□□□ -0.99
SKA3-206ENST00000475251 RPRMQ9NS64 109 aa8.87□□□□□ -0.99
SKA3-206ENST00000475251 A0A0G2JRQ6 117 aa8.86□□□□□ -0.99
SKA3-206ENST00000475251 TNFAIP8O95379 198 aa8.86□□□□□ -0.99
SKA3-206ENST00000475251 CDS2O95674 445 aa8.86□□□□□ -0.99
SKA3-206ENST00000475251 NUDT3O95989 172 aa8.86□□□□□ -0.99
SKA3-206ENST00000475251 DEFB1P60022 68 aa8.86□□□□□ -0.99
SKA3-206ENST00000475251 TTC32Q5I0X7 151 aa8.86□□□□□ -0.99
SKA3-206ENST00000475251 SPATA12Q7Z6I5 190 aa8.86□□□□□ -0.99
SKA3-206ENST00000475251 RBPMSQ93062 196 aaKnown RBP8.86□□□□□ -0.99
SKA3-206ENST00000475251 IGF2BP2-AS1Q96M15 143 aa8.86□□□□□ -0.99
SKA3-206ENST00000475251 TMEM222Q9H0R3 208 aa8.86□□□□□ -0.99
SKA3-206ENST00000475251 DOK5Q9P104 306 aa8.86□□□□□ -0.99
SKA3-206ENST00000475251 COMMD3Q9UBI1 195 aa8.86□□□□□ -0.99
SKA3-206ENST00000475251 LRP1BQ9NZR2 4599 aa8.86□□□□□ -0.99
SKA3-206ENST00000475251 A0A0J9YX75 114 aa8.85□□□□□ -0.99
SKA3-206ENST00000475251 ZFP92A6NM28 416 aa8.85□□□□□ -0.99
SKA3-206ENST00000475251 F5H768 121 aa8.85□□□□□ -0.99
SKA3-206ENST00000475251 SOCS3O14543 225 aa8.85□□□□□ -0.99
SKA3-206ENST00000475251 KLF9Q13886 244 aaPredicted RBP8.85□□□□□ -0.99
SKA3-206ENST00000475251 OR4C16Q8NGL9 310 aa8.85□□□□□ -0.99
SKA3-206ENST00000475251 TERB2Q8NHR7 220 aa8.85□□□□□ -0.99
SKA3-206ENST00000475251 PPP1R14BQ96C90 147 aa8.85□□□□□ -0.99
SKA3-206ENST00000475251 CACNG5Q9UF02 275 aa8.85□□□□□ -0.99
SKA3-206ENST00000475251 U3KQ87 197 aa8.85□□□□□ -0.99
SKA3-206ENST00000475251 SNRPGP15A8MWD9 76 aa8.84□□□□□ -0.99
SKA3-206ENST00000475251 GABARAPH6UMI1 98 aa8.84□□□□□ -0.99
SKA3-206ENST00000475251 NXPH3O95157 252 aa8.84□□□□□ -0.99
SKA3-206ENST00000475251 GABARAPO95166 117 aa8.84□□□□□ -0.99
SKA3-206ENST00000475251 INSP01308 110 aa8.84□□□□□ -0.99
SKA3-206ENST00000475251 ATP5G1P05496 136 aa8.84□□□□□ -0.99
SKA3-206ENST00000475251 OR5AC1P0C628 307 aa8.84□□□□□ -0.99
SKA3-206ENST00000475251 TSPOP30536 169 aa8.84□□□□□ -0.99
SKA3-206ENST00000475251 TGFBR1P36897 503 aa8.84□□□□□ -0.99
SKA3-206ENST00000475251 ATP5G3P48201 142 aa8.84□□□□□ -0.99
SKA3-206ENST00000475251 CLINT1Q14677 625 aa8.84□□□□□ -0.99
SKA3-206ENST00000475251 NMSQ5H8A3 153 aa8.84□□□□□ -0.99
SKA3-206ENST00000475251 OR8I2Q8N0Y5 310 aa8.84□□□□□ -0.99
SKA3-206ENST00000475251 OR13C8Q8NGS7 320 aa8.84□□□□□ -0.99
SKA3-206ENST00000475251 GPR146Q96CH1 333 aa8.84□□□□□ -0.99
SKA3-206ENST00000475251 C16orf92Q96LL3 132 aa8.84□□□□□ -0.99
SKA3-206ENST00000475251 C14orf166Q9Y224 244 aaKnown RBP8.84□□□□□ -0.99
SKA3-206ENST00000475251 TEX13DA0A0J9YY54 714 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms