RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 LCNL1Q6ZST4 164 aa7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 LINC01006Q8NI28 216 aa7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 GATAD1Q8WUU5 269 aa7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 DPF1Q92782 380 aa7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 UBE2E2Q96LR5 201 aa7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 OR5B12Q96R08 314 aa7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 MRPL32Q9BYC8 188 aaKnown RBP7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 KLK15Q9H2R5 256 aa7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 MRPL36Q9P0J6 103 aaKnown RBP7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 PEF1Q9UBV8 284 aaKnown RBP7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 HIGD1AQ9Y241 93 aa7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 CELSR1Q9NYQ6 3014 aa7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 IGKV1OR2-108A0A075B7D4 117 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 CTXND1A0A1B0GTU2 59 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 GGCTO75223 188 aaKnown RBP7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 IFNA1P01562 189 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 LGALS1P09382 135 aaKnown RBP7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 PSG1P11464 419 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 BMI1P35226 326 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 PRR20EP86478 221 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 PRR20CP86479 221 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 PRR20DP86480 221 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 PRR20BP86481 221 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 PRR20AP86496 221 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 IFITM2Q01629 132 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 FAM106AQ4KMX7 169 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 KHDC3LQ587J8 217 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 FAM78BQ5VT40 261 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 ZNF343Q6P1L6 599 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 ZNF491Q8N8L2 437 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 KLHL30-AS1Q8NEE0 82 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 RNF125Q96EQ8 232 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 CCDC140Q96MF4 163 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 SLC25A22Q9H936 323 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 DNAJC4Q9NNZ3 241 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 RABAC1Q9UI14 185 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 PUS1Q9Y606 427 aaKnown RBP eCLIP7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 F8P00451 2351 aa7.98□□□□□ -1.13
PRPF38A-202ENST00000474048 AKAP9Q99996 3911 aa7.97□□□□□ -1.13
PRPF38A-202ENST00000474048 IGKV1D-37A0A075B6S9 117 aa7.97□□□□□ -1.13
PRPF38A-202ENST00000474048 MAP1LC3B2A6NCE7 125 aa7.97□□□□□ -1.13
PRPF38A-202ENST00000474048 PPP5D1E7EU14 171 aa7.97□□□□□ -1.13
PRPF38A-202ENST00000474048 ZP3P21754 424 aa7.97□□□□□ -1.13
PRPF38A-202ENST00000474048 GATA2P23769 480 aaPredicted RBP7.97□□□□□ -1.13
PRPF38A-202ENST00000474048 NDUFA5Q16718 116 aa7.97□□□□□ -1.13
PRPF38A-202ENST00000474048 CLLU1Q5K131 121 aa7.97□□□□□ -1.13
PRPF38A-202ENST00000474048 C10orf99Q6UWK7 81 aa7.97□□□□□ -1.13
PRPF38A-202ENST00000474048 SFT2D1Q8WV19 159 aa7.97□□□□□ -1.13
PRPF38A-202ENST00000474048 C4orf3Q8WVX3 66 aa7.97□□□□□ -1.13
PRPF38A-202ENST00000474048 METTL26Q96S19 204 aa7.97□□□□□ -1.13
PRPF38A-202ENST00000474048 C20orf24Q9BUV8 137 aa7.97□□□□□ -1.13
PRPF38A-202ENST00000474048 MAP1LC3BQ9GZQ8 125 aa7.97□□□□□ -1.13
PRPF38A-202ENST00000474048 HRH4Q9H3N8 390 aa7.97□□□□□ -1.13
PRPF38A-202ENST00000474048 RPRMQ9NS64 109 aa7.97□□□□□ -1.13
PRPF38A-202ENST00000474048 TECRQ9NZ01 308 aaKnown RBP7.97□□□□□ -1.13
PRPF38A-202ENST00000474048 FUT9Q9Y231 359 aa7.97□□□□□ -1.13
PRPF38A-202ENST00000474048 TSSC4Q9Y5U2 329 aaPredicted RBP7.97□□□□□ -1.13
PRPF38A-202ENST00000474048 IGHV3-35A0A0C4DH35 117 aa7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 A0A1B0GV50 99 aa7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 ZNF320A2RRD8 509 aa7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 NDUFA4O00483 81 aa7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 OR7C2O60412 319 aa7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 IGKV1-17P01599 117 aa7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 CTSGP08311 255 aa7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 CDX1P47902 265 aaPredicted RBP7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 PPT1P50897 306 aa7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 LCN15Q6UWW0 184 aa7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 LINC00305Q7Z4B0 112 aa7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 RNF152Q8N8N0 203 aa7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 STXBP6Q8NFX7 210 aa7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 WFDC12Q8WWY7 111 aa7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 GRAMD2BQ96HH9 432 aa7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 CHRDL1Q9BU40 450 aa7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 TMEM231Q9H6L2 316 aa7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 VSIRQ9H7M9 311 aa7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 RFNGQ9Y644 331 aa7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 ZNF469Q96JG9 3925 aaPredicted RBP7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 SETXQ7Z333 2677 aaKnown RBP7.96□□□□□ -1.14
PRPF38A-202ENST00000474048 HIVEP1P15822 2718 aa7.95□□□□□ -1.14
PRPF38A-202ENST00000474048 A0A1W2PRX2 142 aa7.95□□□□□ -1.14
PRPF38A-202ENST00000474048 M0QZ24 198 aa7.95□□□□□ -1.14
PRPF38A-202ENST00000474048 OR2C1O95371 312 aa7.95□□□□□ -1.14
PRPF38A-202ENST00000474048 CXorf1O96002 111 aa7.95□□□□□ -1.14
PRPF38A-202ENST00000474048 HSPB1P04792 205 aaKnown RBP7.95□□□□□ -1.14
PRPF38A-202ENST00000474048 C8orf88P0DMB2 117 aa7.95□□□□□ -1.14
PRPF38A-202ENST00000474048 SRSF2Q01130 221 aaKnown RBP7.95□□□□□ -1.14
PRPF38A-202ENST00000474048 PQLC2Q6ZP29 291 aa7.95□□□□□ -1.14
PRPF38A-202ENST00000474048 C11orf44Q8N8P7 122 aa7.95□□□□□ -1.14
PRPF38A-202ENST00000474048 PCNPQ8WW12 178 aaKnown RBP7.95□□□□□ -1.14
PRPF38A-202ENST00000474048 RAB24Q969Q5 203 aa7.95□□□□□ -1.14
PRPF38A-202ENST00000474048 RCC1LQ96I51 464 aaKnown RBP7.95□□□□□ -1.14
PRPF38A-202ENST00000474048 UFC1Q9Y3C8 167 aa7.95□□□□□ -1.14
PRPF38A-202ENST00000474048 MTORP42345 2549 aa7.95□□□□□ -1.14
PRPF38A-202ENST00000474048 A0A1W2PS18 150 aa7.94□□□□□ -1.14
PRPF38A-202ENST00000474048 SEC14L6B5MCN3 397 aa7.94□□□□□ -1.14
PRPF38A-202ENST00000474048 F8W735 103 aaPredicted RBP7.94□□□□□ -1.14
PRPF38A-202ENST00000474048 LINC01619G3V211 115 aa7.94□□□□□ -1.14
PRPF38A-202ENST00000474048 HMGB3O15347 200 aaKnown RBP7.94□□□□□ -1.14
PRPF38A-202ENST00000474048 NMBP08949 121 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms