RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 LTAP01374 205 aa4.96□□□□□ -1.62
HERC4-209ENST00000473533 RHOGP84095 191 aa4.96□□□□□ -1.62
HERC4-209ENST00000473533 ANKRD39Q53RE8 183 aa4.96□□□□□ -1.62
HERC4-209ENST00000473533 EBLN2Q6P2I7 272 aa4.96□□□□□ -1.62
HERC4-209ENST00000473533 TMPRSS7Q7RTY8 843 aa4.96□□□□□ -1.62
HERC4-209ENST00000473533 OR2T6Q8NHC8 308 aa4.96□□□□□ -1.62
HERC4-209ENST00000473533 SRSF8Q9BRL6 282 aaKnown RBP4.96□□□□□ -1.62
HERC4-209ENST00000473533 ARRDC1-AS1Q9H2J1 176 aa4.96□□□□□ -1.62
HERC4-209ENST00000473533 BDP1A6H8Y1 2624 aa4.96□□□□□ -1.62
HERC4-209ENST00000473533 ABCA1O95477 2261 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 DMXL2Q8TDJ6 3036 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 MED13LQ71F56 2210 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 SERTM2A0A1B0GWG4 89 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 CCL25O15444 150 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 PPBPP02775 128 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 COL8A1P27658 744 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 HES3Q5TGS1 186 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 GTF2H5Q6ZYL4 71 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 LYPD1Q8N2G4 141 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 NUP37Q8NFH4 326 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 C8orf46Q8TAG6 207 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 MRPL20Q9BYC9 149 aaKnown RBP4.95□□□□□ -1.62
HERC4-209ENST00000473533 HIGD1AQ9Y241 93 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 RNF114Q9Y508 228 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 LOC102724200A0A096LPH7 203 aaPredicted RBP4.95□□□□□ -1.62
HERC4-209ENST00000473533 A6NDN8 102 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 SCGB2A1O75556 95 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 IGHV3-7P01780 117 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 FRMD6-AS1P0C7T7 363 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 GATA2P23769 480 aaPredicted RBP4.95□□□□□ -1.62
HERC4-209ENST00000473533 HTR1DP28221 377 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 PLGLAQ15195 96 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 SPATA12Q7Z6I5 190 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 DEFB125Q8N687 156 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 OR4F17Q8NGA8 305 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 OR1N2Q8NGR9 330 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 LEAP2Q969E1 77 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 MLST8Q9BVC4 326 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 C7orf69Q9H7B7 122 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 MAP1AP78559 2803 aaPredicted RBP4.95□□□□□ -1.62
HERC4-209ENST00000473533 TTC28Q96AY4 2481 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 C19orf71A6NCJ1 209 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 NDUFB3O43676 98 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 TCRAP04437 139 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 CRYGCP07315 174 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 PYYP10082 97 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 CD59P13987 128 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 ZNF137PP52743 207 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 LINC01559Q495D7 138 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 UNQ5815/PRO19632Q6UWF5 114 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 FA2HQ7L5A8 372 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 BPIFA4PQ86YQ2 179 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 ATOH7Q8N100 152 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 ZADH2Q8N4Q0 377 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 GATD1Q8NB37 220 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 OR10AG1Q8NH19 301 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 CCL13Q99616 98 aa4.95□□□□□ -1.62
HERC4-209ENST00000473533 TRAV5A0A0B4J249 113 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 A0A1B0GUT8 65 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 NPIPB6E9PJ23 425 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 CA1P00915 261 aaPredicted RBP4.94□□□□□ -1.62
HERC4-209ENST00000473533 IGHV1-46P01743 117 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 IGKV1-16P04430 117 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 RPL27AP46776 148 aaKnown RBP4.94□□□□□ -1.62
HERC4-209ENST00000473533 FOXA3P55318 350 aaPredicted RBP4.94□□□□□ -1.62
HERC4-209ENST00000473533 PVRIGQ6DKI7 326 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 TMEM116Q8NCL8 245 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 OR1B1Q8NGR6 318 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 SCNM1Q9BWG6 230 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 COL25A1Q9BXS0 654 aaPredicted RBP4.94□□□□□ -1.62
HERC4-209ENST00000473533 TET2Q6N021 2002 aaPredicted RBP4.94□□□□□ -1.62
HERC4-209ENST00000473533 IGHV1-24A0A0C4DH33 117 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 SRRM4A7MD48 611 aaKnown RBP4.94□□□□□ -1.62
HERC4-209ENST00000473533 CCL11P51671 97 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 LCN12Q6JVE5 192 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 TMEM108Q6UXF1 575 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 H1FXQ92522 213 aaKnown RBP4.94□□□□□ -1.62
HERC4-209ENST00000473533 FAM168AQ92567 244 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 Q9H3A6 140 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 AP5S1Q9NUS5 200 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 NUDT3O95989 172 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 MOSP00540 346 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 CT45A10P0DMU9 189 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 ORM2P19652 201 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 C1orf185Q5T7R7 199 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 PATE2Q6UY27 113 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 OR10W1Q8NGF6 305 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 FAM122AQ96E09 287 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 RNF5Q99942 180 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 ZNF835Q9Y2P0 537 aa4.94□□□□□ -1.62
HERC4-209ENST00000473533 MYOD1P15172 320 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 RBX1P62877 108 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 BVES-AS1Q5T3Y7 98 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 VHLLQ6RSH7 139 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 C1orf229Q6ZS94 237 aaPredicted RBP4.93□□□□□ -1.62
HERC4-209ENST00000473533 MOB3BQ86TA1 216 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 Q86TA4 180 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 CIARTQ8N365 385 aaPredicted RBP4.93□□□□□ -1.62
HERC4-209ENST00000473533 TMEM75Q8N9X5 138 aa4.93□□□□□ -1.62
HERC4-209ENST00000473533 OR9G4Q8NGQ1 327 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms