RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 C15orf53Q8NAA6 179 aa6.53□□□□□ -1.36
VCL-204ENST00000472585 OR1S2Q8NGQ3 325 aa6.53□□□□□ -1.36
VCL-204ENST00000472585 LHFPL5Q8TAF8 219 aa6.53□□□□□ -1.36
VCL-204ENST00000472585 Q8WTZ3 238 aa6.53□□□□□ -1.36
VCL-204ENST00000472585 NPIPB3Q92617 1050 aa6.53□□□□□ -1.36
VCL-204ENST00000472585 FCGR1BQ92637 280 aa6.53□□□□□ -1.36
VCL-204ENST00000472585 SAV1Q9H4B6 383 aaPredicted RBP6.53□□□□□ -1.36
VCL-204ENST00000472585 SEPSECSQ9HD40 501 aaKnown RBP6.53□□□□□ -1.36
VCL-204ENST00000472585 PTTG2Q9NZH5 202 aa6.53□□□□□ -1.36
VCL-204ENST00000472585 TRAV30A0A087WSZ9 112 aa6.52□□□□□ -1.37
VCL-204ENST00000472585 C3orf85A0A1B0GTC6 90 aa6.52□□□□□ -1.37
VCL-204ENST00000472585 CORTO00230 105 aa6.52□□□□□ -1.37
VCL-204ENST00000472585 PSG1P11464 419 aa6.52□□□□□ -1.37
VCL-204ENST00000472585 SNRPD3P62318 126 aaKnown RBP6.52□□□□□ -1.37
VCL-204ENST00000472585 C2orf83Q53S99 150 aa6.52□□□□□ -1.37
VCL-204ENST00000472585 OR4D10Q8NGI6 311 aa6.52□□□□□ -1.37
VCL-204ENST00000472585 C20orf173Q96LM9 149 aa6.52□□□□□ -1.37
VCL-204ENST00000472585 CLUHP3Q96NS8 147 aa6.52□□□□□ -1.37
VCL-204ENST00000472585 KRTAP1-5Q9BYS1 174 aa6.52□□□□□ -1.37
VCL-204ENST00000472585 UBR4Q5T4S7 5183 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 IGKV1D-37A0A075B6S9 117 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 LOC102723971A0A1B0GUV8 181 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 H3BS24 57 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 TMEM127O75204 238 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 TOMM40O96008 361 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 PGAM2P15259 253 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 UCP1P25874 307 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 EIF2B2P49770 351 aaKnown RBP6.51□□□□□ -1.37
VCL-204ENST00000472585 AKR1C2P52895 323 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 LSM3P62310 102 aaKnown RBP6.51□□□□□ -1.37
VCL-204ENST00000472585 FCN2Q15485 313 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 NEDD8Q15843 81 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 FAM78BQ5VT40 261 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 AMTNQ6UX39 209 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 FOXI2Q6ZQN5 318 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 SNX29P2Q8IUI4 249 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 LYPD1Q8N2G4 141 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 OR4B1Q8NGF8 309 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 OR51G1Q8NGK1 321 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 GPR146Q96CH1 333 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 NARS2Q96I59 477 aaKnown RBP6.51□□□□□ -1.37
VCL-204ENST00000472585 LINC00052Q96N35 136 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 KLK11Q9UBX7 282 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 LINC00588Q9Y4M8 146 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 MYCBP2O75592 4640 aa6.51□□□□□ -1.37
VCL-204ENST00000472585 A0A0J9YX75 114 aa6.5□□□□□ -1.37
VCL-204ENST00000472585 PLAC8L1A1L4L8 177 aa6.5□□□□□ -1.37
VCL-204ENST00000472585 CRXO43186 299 aaPredicted RBP6.5□□□□□ -1.37
VCL-204ENST00000472585 RD3LP0DJH9 198 aa6.5□□□□□ -1.37
VCL-204ENST00000472585 AZU1P20160 251 aa6.5□□□□□ -1.37
VCL-204ENST00000472585 S100GP29377 79 aa6.5□□□□□ -1.37
VCL-204ENST00000472585 CCL18P55774 89 aa6.5□□□□□ -1.37
VCL-204ENST00000472585 SPCS3P61009 180 aa6.5□□□□□ -1.37
VCL-204ENST00000472585 DAD1P61803 113 aa6.5□□□□□ -1.37
VCL-204ENST00000472585 PSG9Q00887 426 aa6.5□□□□□ -1.37
VCL-204ENST00000472585 ZNF90Q03938 601 aa6.5□□□□□ -1.37
VCL-204ENST00000472585 MEF2DQ14814 521 aa6.5□□□□□ -1.37
VCL-204ENST00000472585 OR52E5Q8NH55 327 aa6.5□□□□□ -1.37
VCL-204ENST00000472585 GLYATL2Q8WU03 294 aa6.5□□□□□ -1.37
VCL-204ENST00000472585 ACY3Q96HD9 319 aa6.5□□□□□ -1.37
VCL-204ENST00000472585 A8MTW9 85 aa6.49□□□□□ -1.37
VCL-204ENST00000472585 ZNF705GA8MUZ8 300 aaPredicted RBP6.49□□□□□ -1.37
VCL-204ENST00000472585 CDS2O95674 445 aa6.49□□□□□ -1.37
VCL-204ENST00000472585 HBE1P02100 147 aa6.49□□□□□ -1.37
VCL-204ENST00000472585 CD3DP04234 171 aa6.49□□□□□ -1.37
VCL-204ENST00000472585 SLC25A4P12235 298 aa6.49□□□□□ -1.37
VCL-204ENST00000472585 RCVRNP35243 200 aa6.49□□□□□ -1.37
VCL-204ENST00000472585 HTR2BP41595 481 aa6.49□□□□□ -1.37
VCL-204ENST00000472585 RORCP51449 518 aa6.49□□□□□ -1.37
VCL-204ENST00000472585 PAX9P55771 341 aa6.49□□□□□ -1.37
VCL-204ENST00000472585 TRIM16LQ309B1 348 aa6.49□□□□□ -1.37
VCL-204ENST00000472585 RNASE12Q5GAN4 147 aaKnown RBP6.49□□□□□ -1.37
VCL-204ENST00000472585 SELENOHQ8IZQ5 122 aaKnown RBP6.49□□□□□ -1.37
VCL-204ENST00000472585 OR13C8Q8NGS7 320 aa6.49□□□□□ -1.37
VCL-204ENST00000472585 RNASEH2CQ8TDP1 164 aaKnown RBP6.49□□□□□ -1.37
VCL-204ENST00000472585 YIPF6Q96EC8 236 aa6.49□□□□□ -1.37
VCL-204ENST00000472585 ZNF486Q96H40 463 aaPredicted RBP6.49□□□□□ -1.37
VCL-204ENST00000472585 RTBDNQ9BSG5 229 aaPredicted RBP6.49□□□□□ -1.37
VCL-204ENST00000472585 PDCD10Q9BUL8 212 aa6.49□□□□□ -1.37
VCL-204ENST00000472585 TMEM222Q9H0R3 208 aa6.49□□□□□ -1.37
VCL-204ENST00000472585 SCPEP1Q9HB40 452 aa6.49□□□□□ -1.37
VCL-204ENST00000472585 ENY2Q9NPA8 101 aa6.49□□□□□ -1.37
VCL-204ENST00000472585 HEYLQ9NQ87 328 aaPredicted RBP6.49□□□□□ -1.37
VCL-204ENST00000472585 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.49□□□□□ -1.37
VCL-204ENST00000472585 COMMD3Q9UBI1 195 aa6.49□□□□□ -1.37
VCL-204ENST00000472585 RPS10-NUDT3A0A1W2PQS6 291 aa6.48□□□□□ -1.37
VCL-204ENST00000472585 HPGDSO60760 199 aa6.48□□□□□ -1.37
VCL-204ENST00000472585 NUDT3O95989 172 aa6.48□□□□□ -1.37
VCL-204ENST00000472585 OR5AC1P0C628 307 aa6.48□□□□□ -1.37
VCL-204ENST00000472585 BTF3P20290 206 aaKnown RBP6.48□□□□□ -1.37
VCL-204ENST00000472585 FUSP35637 526 aaKnown RBP eCLIP6.48□□□□□ -1.37
VCL-204ENST00000472585 RRN3P1Q2M238 152 aa6.48□□□□□ -1.37
VCL-204ENST00000472585 NMSQ5H8A3 153 aa6.48□□□□□ -1.37
VCL-204ENST00000472585 TTC32Q5I0X7 151 aa6.48□□□□□ -1.37
VCL-204ENST00000472585 CROCCP3Q8IVE0 287 aa6.48□□□□□ -1.37
VCL-204ENST00000472585 SLC24A4Q8NFF2 622 aa6.48□□□□□ -1.37
VCL-204ENST00000472585 OR52I2Q8NH67 350 aa6.48□□□□□ -1.37
VCL-204ENST00000472585 MARCH1Q8TCQ1 289 aa6.48□□□□□ -1.37
VCL-204ENST00000472585 RNF125Q96EQ8 232 aa6.48□□□□□ -1.37
VCL-204ENST00000472585 RRNAD1Q96FB5 475 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms