RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 RHOGP84095 191 aa6.88□□□□□ -1.31
SF3A1-206ENST00000471037 CLINT1Q14677 625 aa6.88□□□□□ -1.31
SF3A1-206ENST00000471037 OR9G4Q8NGQ1 327 aa6.88□□□□□ -1.31
SF3A1-206ENST00000471037 VN1R17PQ8TDU5 208 aa6.88□□□□□ -1.31
SF3A1-206ENST00000471037 BSCL2Q96G97 398 aaPredicted RBP6.88□□□□□ -1.31
SF3A1-206ENST00000471037 USMG5Q96IX5 58 aa6.88□□□□□ -1.31
SF3A1-206ENST00000471037 ATP6V0BQ99437 205 aa6.88□□□□□ -1.31
SF3A1-206ENST00000471037 PARD6GQ9BYG4 376 aaPredicted RBP6.88□□□□□ -1.31
SF3A1-206ENST00000471037 SMIM3Q9BZL3 60 aa6.88□□□□□ -1.31
SF3A1-206ENST00000471037 FNDC4Q9H6D8 234 aaPredicted RBP6.88□□□□□ -1.31
SF3A1-206ENST00000471037 SIGLEC8Q9NYZ4 499 aa6.88□□□□□ -1.31
SF3A1-206ENST00000471037 A0A0G2JLM5 398 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 UBE2L5PA0A1B0GUS4 154 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 SMCO3A2RU48 225 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 MPDU1O75352 247 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 NDUFB8O95169 186 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 IFNA5P01569 189 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 FCGR2BP31994 310 aaPredicted RBP6.87□□□□□ -1.31
SF3A1-206ENST00000471037 MFAP4P55083 255 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 AKR1C1Q04828 323 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 KLF5Q13887 457 aaPredicted RBP6.87□□□□□ -1.31
SF3A1-206ENST00000471037 OPCMLQ14982 345 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 C15orf32Q32M92 178 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 FAM209BQ5JX69 171 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 IL34Q6ZMJ4 242 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 TMEM144Q7Z5S9 345 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 GTSCR1Q86UQ5 136 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 SLC51BQ86UW2 128 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 UBAC2Q8NBM4 344 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 TMEM116Q8NCL8 245 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 OR4X1Q8NH49 305 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 IL17DQ8TAD2 202 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 SCARB1Q8WTV0 552 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 EEF1AKMT3Q96AZ1 226 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 TXN2Q99757 166 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 WFDC1Q9HC57 220 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 NPVFQ9HCQ7 196 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 C21orf62Q9NYP8 219 aa6.87□□□□□ -1.31
SF3A1-206ENST00000471037 TRBV7-1A0A0A6YYK4 115 aa6.86□□□□□ -1.31
SF3A1-206ENST00000471037 SCGB2A1O75556 95 aa6.86□□□□□ -1.31
SF3A1-206ENST00000471037 NPBWR1P48145 328 aa6.86□□□□□ -1.31
SF3A1-206ENST00000471037 RND2P52198 227 aa6.86□□□□□ -1.31
SF3A1-206ENST00000471037 ATP5G2Q06055 141 aa6.86□□□□□ -1.31
SF3A1-206ENST00000471037 RAB31Q13636 194 aa6.86□□□□□ -1.31
SF3A1-206ENST00000471037 GAMTQ14353 236 aa6.86□□□□□ -1.31
SF3A1-206ENST00000471037 MLANAQ16655 118 aa6.86□□□□□ -1.31
SF3A1-206ENST00000471037 RPL7L1Q6DKI1 246 aaKnown RBP6.86□□□□□ -1.31
SF3A1-206ENST00000471037 LCN12Q6JVE5 192 aa6.86□□□□□ -1.31
SF3A1-206ENST00000471037 TEPPQ6URK8 271 aa6.86□□□□□ -1.31
SF3A1-206ENST00000471037 THAP8Q8NA92 274 aa6.86□□□□□ -1.31
SF3A1-206ENST00000471037 STOML3Q8TAV4 291 aa6.86□□□□□ -1.31
SF3A1-206ENST00000471037 SCGB1C1Q8TD33 95 aa6.86□□□□□ -1.31
SF3A1-206ENST00000471037 ACY3Q96HD9 319 aa6.86□□□□□ -1.31
SF3A1-206ENST00000471037 ZNF471Q9BX82 626 aaPredicted RBP6.86□□□□□ -1.31
SF3A1-206ENST00000471037 WDR61Q9GZS3 305 aaKnown RBP6.86□□□□□ -1.31
SF3A1-206ENST00000471037 CYTL1Q9NRR1 136 aa6.86□□□□□ -1.31
SF3A1-206ENST00000471037 WDR83OSQ9Y284 106 aa6.86□□□□□ -1.31
SF3A1-206ENST00000471037 TRAV30A0A087WSZ9 112 aa6.85□□□□□ -1.31
SF3A1-206ENST00000471037 IGHV3-21A0A0B4J1V1 117 aa6.85□□□□□ -1.31
SF3A1-206ENST00000471037 MFSD2BA6NFX1 497 aa6.85□□□□□ -1.31
SF3A1-206ENST00000471037 CLN5O75503 358 aa6.85□□□□□ -1.31
SF3A1-206ENST00000471037 IGHV3-48P01763 117 aa6.85□□□□□ -1.31
SF3A1-206ENST00000471037 CSN3P07498 182 aa6.85□□□□□ -1.31
SF3A1-206ENST00000471037 TPT1P13693 172 aaKnown RBP6.85□□□□□ -1.31
SF3A1-206ENST00000471037 FGF7P21781 194 aa6.85□□□□□ -1.31
SF3A1-206ENST00000471037 SYNJ2BPP57105 145 aa6.85□□□□□ -1.31
SF3A1-206ENST00000471037 ZNF343Q6P1L6 599 aa6.85□□□□□ -1.31
SF3A1-206ENST00000471037 LINC00322Q6ZN03 302 aaPredicted RBP6.85□□□□□ -1.31
SF3A1-206ENST00000471037 OR2K2Q8NGT1 345 aa6.85□□□□□ -1.31
SF3A1-206ENST00000471037 ZNF502Q8TBZ5 544 aa6.85□□□□□ -1.31
SF3A1-206ENST00000471037 NPIPB3Q92617 1050 aa6.85□□□□□ -1.31
SF3A1-206ENST00000471037 ARV1Q9H2C2 271 aa6.85□□□□□ -1.31
SF3A1-206ENST00000471037 TUBA4BQ9H853 241 aa6.85□□□□□ -1.31
SF3A1-206ENST00000471037 KCNIP2Q9NS61 270 aa6.85□□□□□ -1.31
SF3A1-206ENST00000471037 MRPL36Q9P0J6 103 aaKnown RBP6.85□□□□□ -1.31
SF3A1-206ENST00000471037 PLECQ15149 4684 aaKnown RBP6.85□□□□□ -1.31
SF3A1-206ENST00000471037 ANKRD34BA5PLL1 514 aa6.84□□□□□ -1.31
SF3A1-206ENST00000471037 ZFP92A6NM28 416 aa6.84□□□□□ -1.31
SF3A1-206ENST00000471037 C17orf112F2Z3M2 114 aa6.84□□□□□ -1.31
SF3A1-206ENST00000471037 GNG7O60262 68 aa6.84□□□□□ -1.31
SF3A1-206ENST00000471037 FABP1P07148 127 aa6.84□□□□□ -1.31
SF3A1-206ENST00000471037 IGLC1P0CG04 106 aa6.84□□□□□ -1.31
SF3A1-206ENST00000471037 DEFA5Q01523 94 aa6.84□□□□□ -1.31
SF3A1-206ENST00000471037 Q56UQ5 140 aa6.84□□□□□ -1.31
SF3A1-206ENST00000471037 EIF5AL1Q6IS14 154 aaKnown RBP6.84□□□□□ -1.31
SF3A1-206ENST00000471037 BTNL8Q6UX41 500 aa6.84□□□□□ -1.31
SF3A1-206ENST00000471037 BAP18Q8IXM2 172 aa6.84□□□□□ -1.31
SF3A1-206ENST00000471037 ZNF709Q8N972 641 aa6.84□□□□□ -1.31
SF3A1-206ENST00000471037 ST8SIA2Q92186 375 aa6.84□□□□□ -1.31
SF3A1-206ENST00000471037 GNPNAT1Q96EK6 184 aaPredicted RBP6.84□□□□□ -1.31
SF3A1-206ENST00000471037 CCDC140Q96MF4 163 aa6.84□□□□□ -1.31
SF3A1-206ENST00000471037 TRGV9Q99603 122 aa6.84□□□□□ -1.31
SF3A1-206ENST00000471037 GINS3Q9BRX5 216 aa6.84□□□□□ -1.31
SF3A1-206ENST00000471037 PEF1Q9UBV8 284 aaKnown RBP6.84□□□□□ -1.31
SF3A1-206ENST00000471037 TIMM9Q9Y5J7 89 aa6.84□□□□□ -1.31
SF3A1-206ENST00000471037 ALMS1Q8TCU4 4167 aa6.84□□□□□ -1.31
SF3A1-206ENST00000471037 IGKV1OR2-108A0A075B7D4 117 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.83□□□□□ -1.32
SF3A1-206ENST00000471037 IZUMO1RA6ND01 250 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 F8W735 103 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms