RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 C8orf31Q8N9H6 132 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 Q8N9W7 124 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 OR11H7Q8NGC8 314 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 OR10A7Q8NGE5 316 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 OR10W1Q8NGF6 305 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 OR4A16Q8NH70 328 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 GRPEL2Q8TAA5 225 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 GPR146Q96CH1 333 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 MALSU1Q96EH3 234 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 VSIG2Q96IQ7 327 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 SEC22AQ96IW7 307 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 OR10C1Q96KK4 312 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 PRRT1Q99946 306 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 MAGT1Q9H0U3 335 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 ZNF430Q9H8G1 570 aaPredicted RBP2.8□□□□□ -1.96
COL9A1-206ENST00000470652 ZNF702PQ9H963 129 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 NRN1Q9NPD7 142 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 PIPOXQ9P0Z9 390 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 COPZ2Q9P299 210 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 METTL1Q9UBP6 276 aaKnown RBP2.8□□□□□ -1.96
COL9A1-206ENST00000470652 SCP2D1Q9UJQ7 156 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 C14orf166Q9Y224 244 aaKnown RBP2.8□□□□□ -1.96
COL9A1-206ENST00000470652 WASHC3Q9Y3C0 194 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 TBL2Q9Y4P3 447 aaKnown RBP2.8□□□□□ -1.96
COL9A1-206ENST00000470652 WSB1Q9Y6I7 421 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 MINOS1-NBL1R4GNA1 71 aa2.8□□□□□ -1.96
COL9A1-206ENST00000470652 WNK1Q9H4A3 2382 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 ANK2Q01484 3957 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 IGHV7-81A0A0B4J1V7 117 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 NAP1L6A6NFF2 107 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 FAM25EA8MYX2 175 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 G3V3Q6 166 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 H0Y980 276 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 ITGB1BP1O14713 200 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 RTL8CO15255 209 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 NBR2O15453 112 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 SOX15O60248 233 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 TMEM50AO95807 157 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 PTTG1O95997 202 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 MOSP00540 346 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 IGHV3-23P01764 117 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 FBP1P09467 338 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 IAPPP10997 89 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 IL3RAP26951 378 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 FAUP35544 74 aaKnown RBP2.79□□□□□ -1.96
COL9A1-206ENST00000470652 H2BFSP57053 126 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 AP3S2P59780 193 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 RND3P61587 244 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 UBA52P62987 128 aaKnown RBP2.79□□□□□ -1.96
COL9A1-206ENST00000470652 ATRAIDQ6UW56 229 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 LYG2Q86SG7 212 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 FAM71E2Q8N5Q1 922 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 MINDY2Q8NBR6 621 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 DUSP18Q8NEJ0 188 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 LINC01006Q8NI28 216 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 C15orf40Q8WUR7 153 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 RBM14Q96PK6 669 aaKnown RBP2.79□□□□□ -1.96
COL9A1-206ENST00000470652 MARVELD1Q9BSK0 173 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 HINT2Q9BX68 163 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 TMEM222Q9H0R3 208 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 ALX4Q9H161 411 aaPredicted RBP2.79□□□□□ -1.96
COL9A1-206ENST00000470652 RANBP3Q9H6Z4 567 aaPredicted RBP2.79□□□□□ -1.96
COL9A1-206ENST00000470652 ZC4H2Q9NQZ6 224 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 PARP11Q9NR21 331 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 MRPL36Q9P0J6 103 aaKnown RBP2.79□□□□□ -1.96
COL9A1-206ENST00000470652 RABL2AQ9UBK7 228 aaPredicted RBP2.79□□□□□ -1.96
COL9A1-206ENST00000470652 VPREB3Q9UKI3 123 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 RABL2BQ9UNT1 228 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 AMMECR1Q9Y4X0 333 aaPredicted RBP2.79□□□□□ -1.96
COL9A1-206ENST00000470652 NUBP2Q9Y5Y2 271 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 VWFP04275 2813 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 ATRQ13535 2644 aa2.79□□□□□ -1.96
COL9A1-206ENST00000470652 STAB1Q9NY15 2570 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 TRRAPQ9Y4A5 3859 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 TRAV14DV4A0A0A6YYC5 116 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 TEX50A0A1B0GTY4 177 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 C7orf66A4D0T2 115 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 CENPXA8MT69 81 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 H3BP45 60 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 UPK2O00526 184 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 NDUFA3O95167 84 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 CDS2O95674 445 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 APOA2P02652 100 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 SERPINE2P07093 398 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 CT45A10P0DMU9 189 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 CD1BP29016 333 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 CEACAM3P40198 252 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 RANBP1P43487 201 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 AKR1C2P52895 323 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 NKX2-5P52952 324 aaPredicted RBP2.78□□□□□ -1.96
COL9A1-206ENST00000470652 DEFA1P59665 94 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 DEFA3P59666 94 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 POLR2GP62487 172 aaKnown RBP eCLIP2.78□□□□□ -1.96
COL9A1-206ENST00000470652 EBI3Q14213 229 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 PLGLAQ15195 96 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 TNXAQ16473 311 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 PRSS8Q16651 343 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 RTL8BQ17RB0 113 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 C5orf64Q2M2E5 130 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 NMSQ5H8A3 153 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms