RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 PSG1P11464 419 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 SLC25A16P16260 332 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 S100A7P31151 101 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 SAA4P35542 130 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 CRIP2P52943 208 aaPredicted RBP6.01□□□□□ -1.45
COL6A3-208ENST00000468792 MFAP4P55083 255 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 FAM3BP58499 235 aaPredicted RBP6.01□□□□□ -1.45
COL6A3-208ENST00000468792 UBE2L3P68036 154 aaKnown RBP6.01□□□□□ -1.45
COL6A3-208ENST00000468792 PRB3Q04118 309 aaPredicted RBP6.01□□□□□ -1.45
COL6A3-208ENST00000468792 SMUG1Q53HV7 270 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 ASPHD1Q5U4P2 390 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 TEX38Q6PEX7 206 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 LYPD1Q8N2G4 141 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 ARL6IP6Q8N6S5 226 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 SGMS2Q8NHU3 365 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 OCC1Q8TAD7 63 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 RASL11BQ9BPW5 248 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 DERL1Q9BUN8 251 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 OSTCQ9NRP0 149 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 GAR1Q9NY12 217 aaKnown RBP6.01□□□□□ -1.45
COL6A3-208ENST00000468792 HIGD1AQ9Y241 93 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 KLF12Q9Y4X4 402 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 IGHV1-69DA0A0B4J2H0 117 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 IGHV4-61A0A0C4DH41 118 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 TRBV6-1A0A0K0K1D8 114 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 MDFIC2A0A1B0GVS7 189 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 WI2-2373I1.2A0A1W2PRP0 233 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 NCBP2LA6PVI3 153 aaKnown RBP6□□□□□ -1.45
COL6A3-208ENST00000468792 PPP5D1E7EU14 171 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 ISLRO14498 428 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 GCGP01275 180 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 IGHV1-69P01742 117 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 NBEAP1P0C6P0 100 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 EGR2P11161 476 aaPredicted RBP6□□□□□ -1.45
COL6A3-208ENST00000468792 GP9P14770 177 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 HOXA5P20719 270 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 CRYBB3P26998 211 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 SMCPP49901 116 aaPredicted RBP6□□□□□ -1.45
COL6A3-208ENST00000468792 GNG4P50150 75 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 ATP5J2P56134 94 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 SUMO1P63165 101 aaKnown RBP6□□□□□ -1.45
COL6A3-208ENST00000468792 TIGITQ495A1 244 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 MORN5Q5VZ52 161 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 RUSC1-AS1Q66K80 236 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 FAM231DQ6ZW35 169 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 ZNF329Q86UD4 541 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 ZNF843Q8N446 348 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 OR10G8Q8NGN5 311 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 FAM110DQ8TAY7 271 aaPredicted RBP6□□□□□ -1.45
COL6A3-208ENST00000468792 IGF2BP2-AS1Q96M15 143 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 RBM14Q96PK6 669 aaKnown RBP6□□□□□ -1.45
COL6A3-208ENST00000468792 ELOVL1Q9BW60 279 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 URGCP-MRPS24S4R325 110 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 CACNA1BQ00975 2339 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 WNK2Q9Y3S1 2297 aa6□□□□□ -1.45
COL6A3-208ENST00000468792 TRBV9A0A0B4J1U6 114 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 TRAV5A0A0B4J249 113 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 TRAV20A0A0B4J274 112 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 B4DSR2 109 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 HIST1H1EP10412 219 aaKnown RBP5.99□□□□□ -1.45
COL6A3-208ENST00000468792 ORM2P19652 201 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 CNN1P51911 297 aaKnown RBP5.99□□□□□ -1.45
COL6A3-208ENST00000468792 SNRPEP62304 92 aaKnown RBP5.99□□□□□ -1.45
COL6A3-208ENST00000468792 RPL19P84098 196 aaKnown RBP5.99□□□□□ -1.45
COL6A3-208ENST00000468792 NDPQ00604 133 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 PDE6HQ13956 83 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 KIAA0141Q14154 515 aaPredicted RBP5.99□□□□□ -1.45
COL6A3-208ENST00000468792 TMEM183BQ1AE95 376 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 COX19Q49B96 90 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 COA6Q5JTJ3 125 aaKnown RBP5.99□□□□□ -1.45
COL6A3-208ENST00000468792 LINC00518Q8N0U6 118 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 ZNF491Q8N8L2 437 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 C5orf17Q8NAS9 161 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 OR1B1Q8NGR6 318 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 SHANK2-AS3Q9BTD1 123 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 CHRDL1Q9BU40 450 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 SLC25A39Q9BZJ4 359 aaPredicted RBP5.99□□□□□ -1.45
COL6A3-208ENST00000468792 SAV1Q9H4B6 383 aaPredicted RBP5.99□□□□□ -1.45
COL6A3-208ENST00000468792 OTORQ9NRC9 128 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 C21orf62Q9NYP8 219 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 IL36BQ9NZH7 164 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 ZNF580Q9UK33 172 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 EPDR1Q9UM22 224 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 ABCA1O95477 2261 aa5.99□□□□□ -1.45
COL6A3-208ENST00000468792 ZNF462Q96JM2 2506 aa5.98□□□□□ -1.45
COL6A3-208ENST00000468792 VPS13CQ709C8 3753 aa5.98□□□□□ -1.45
COL6A3-208ENST00000468792 F8W735 103 aaPredicted RBP5.98□□□□□ -1.45
COL6A3-208ENST00000468792 H3BRN7 92 aa5.98□□□□□ -1.45
COL6A3-208ENST00000468792 K7EN84 100 aa5.98□□□□□ -1.45
COL6A3-208ENST00000468792 M0QZK8 103 aa5.98□□□□□ -1.45
COL6A3-208ENST00000468792 PEX7O00628 323 aa5.98□□□□□ -1.45
COL6A3-208ENST00000468792 HIST1H2BKO60814 126 aa5.98□□□□□ -1.45
COL6A3-208ENST00000468792 NDUFB8O95169 186 aa5.98□□□□□ -1.45
COL6A3-208ENST00000468792 IGLV2-8P01709 118 aa5.98□□□□□ -1.45
COL6A3-208ENST00000468792 IGHV3-48P01763 117 aa5.98□□□□□ -1.45
COL6A3-208ENST00000468792 TRGC2P03986 189 aa5.98□□□□□ -1.45
COL6A3-208ENST00000468792 HIST1H2BJP06899 126 aa5.98□□□□□ -1.45
COL6A3-208ENST00000468792 MSMBP08118 114 aa5.98□□□□□ -1.45
COL6A3-208ENST00000468792 PYYP10082 97 aa5.98□□□□□ -1.45
COL6A3-208ENST00000468792 HIST1H2BOP23527 126 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms