RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 SLC35B1P78383 322 aa10.05□□□□□ -0.8
COL4A1-202ENST00000467182 CCL20P78556 96 aa10.05□□□□□ -0.8
COL4A1-202ENST00000467182 NDUFA5Q16718 116 aa10.05□□□□□ -0.8
COL4A1-202ENST00000467182 ZNF343Q6P1L6 599 aa10.05□□□□□ -0.8
COL4A1-202ENST00000467182 TEX38Q6PEX7 206 aa10.05□□□□□ -0.8
COL4A1-202ENST00000467182 CLEC19AQ6UXS0 136 aa10.05□□□□□ -0.8
COL4A1-202ENST00000467182 RAB24Q969Q5 203 aa10.05□□□□□ -0.8
COL4A1-202ENST00000467182 ACTR3CQ9C0K3 210 aaPredicted RBP10.05□□□□□ -0.8
COL4A1-202ENST00000467182 HRH4Q9H3N8 390 aa10.05□□□□□ -0.8
COL4A1-202ENST00000467182 SLC25A22Q9H936 323 aa10.05□□□□□ -0.8
COL4A1-202ENST00000467182 SEPSECSQ9HD40 501 aaKnown RBP10.05□□□□□ -0.8
COL4A1-202ENST00000467182 TGOLN2O43493 480 aa10.04□□□□□ -0.8
COL4A1-202ENST00000467182 TCF21O43680 179 aa10.04□□□□□ -0.8
COL4A1-202ENST00000467182 NDUFA7O95182 113 aa10.04□□□□□ -0.8
COL4A1-202ENST00000467182 OR2C1O95371 312 aa10.04□□□□□ -0.8
COL4A1-202ENST00000467182 TRBV12-3P01733 135 aa10.04□□□□□ -0.8
COL4A1-202ENST00000467182 RPLP1P05386 114 aaKnown RBP10.04□□□□□ -0.8
COL4A1-202ENST00000467182 RD3LP0DJH9 198 aa10.04□□□□□ -0.8
COL4A1-202ENST00000467182 MORN5Q5VZ52 161 aa10.04□□□□□ -0.8
COL4A1-202ENST00000467182 LCN15Q6UWW0 184 aa10.04□□□□□ -0.8
COL4A1-202ENST00000467182 ZNF491Q8N8L2 437 aa10.04□□□□□ -0.8
COL4A1-202ENST00000467182 SCRT1Q9BWW7 348 aa10.04□□□□□ -0.8
COL4A1-202ENST00000467182 GAR1Q9NY12 217 aaKnown RBP10.04□□□□□ -0.8
COL4A1-202ENST00000467182 A0A0G2JLM5 398 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 MAP1LC3B2A6NCE7 125 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 PPP5D1E7EU14 171 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 HMGB3O15347 200 aaKnown RBP10.03□□□□□ -0.8
COL4A1-202ENST00000467182 IGHV3-11P01762 117 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 STAG3L2P0CL84 134 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 STAG3L3P0CL85 134 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 FGF8P55075 233 aaPredicted RBP10.03□□□□□ -0.8
COL4A1-202ENST00000467182 TCTEX1D4Q5JR98 221 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 MIR17HGQ75NE6 70 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 COMMD7Q86VX2 200 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 KLHDC1Q8N7A1 406 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 OR51G1Q8NGK1 321 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 OR1L4Q8NGR5 311 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 LINC01006Q8NI28 216 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 GATAD1Q8WUU5 269 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 SFT2D1Q8WV19 159 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 C19orf24Q9BVV8 132 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 MAP1LC3BQ9GZQ8 125 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 ZFAND3Q9H8U3 227 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 DNAJC4Q9NNZ3 241 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 MRPL27Q9P0M9 148 aaKnown RBP10.03□□□□□ -0.8
COL4A1-202ENST00000467182 DOK5Q9P104 306 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 FUT9Q9Y231 359 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 F8P00451 2351 aa10.03□□□□□ -0.8
COL4A1-202ENST00000467182 A0A1B0GV50 99 aa10.02□□□□□ -0.81
COL4A1-202ENST00000467182 NUPL2O15504 423 aaKnown RBP10.02□□□□□ -0.81
COL4A1-202ENST00000467182 CRYBA1P05813 215 aa10.02□□□□□ -0.81
COL4A1-202ENST00000467182 FABP1P07148 127 aa10.02□□□□□ -0.81
COL4A1-202ENST00000467182 RHOBP62745 196 aa10.02□□□□□ -0.81
COL4A1-202ENST00000467182 SRSF2Q01130 221 aaKnown RBP10.02□□□□□ -0.81
COL4A1-202ENST00000467182 USF2Q15853 346 aaPredicted RBP10.02□□□□□ -0.81
COL4A1-202ENST00000467182 FAM78BQ5VT40 261 aa10.02□□□□□ -0.81
COL4A1-202ENST00000467182 IL34Q6ZMJ4 242 aa10.02□□□□□ -0.81
COL4A1-202ENST00000467182 ZNF600Q6ZNG1 722 aa10.02□□□□□ -0.81
COL4A1-202ENST00000467182 COMMD1Q8N668 190 aa10.02□□□□□ -0.81
COL4A1-202ENST00000467182 OR4X2Q8NGF9 303 aa10.02□□□□□ -0.81
COL4A1-202ENST00000467182 OR1B1Q8NGR6 318 aa10.02□□□□□ -0.81
COL4A1-202ENST00000467182 ZNF503Q96F45 646 aa10.02□□□□□ -0.81
COL4A1-202ENST00000467182 FAM167A-AS1Q96KT0 104 aa10.02□□□□□ -0.81
COL4A1-202ENST00000467182 PFDN5Q99471 154 aa10.02□□□□□ -0.81
COL4A1-202ENST00000467182 MRPL32Q9BYC8 188 aaKnown RBP10.02□□□□□ -0.81
COL4A1-202ENST00000467182 GNB4Q9HAV0 340 aa10.02□□□□□ -0.81
COL4A1-202ENST00000467182 PFDN2Q9UHV9 154 aa10.02□□□□□ -0.81
COL4A1-202ENST00000467182 ELOA3CA0A087WX78 387 aaPredicted RBP10.01□□□□□ -0.81
COL4A1-202ENST00000467182 TRAV5A0A0B4J249 113 aa10.01□□□□□ -0.81
COL4A1-202ENST00000467182 A0A1W2PPV4 95 aa10.01□□□□□ -0.81
COL4A1-202ENST00000467182 COX7A2P2O60397 106 aa10.01□□□□□ -0.81
COL4A1-202ENST00000467182 HYPMO75409 117 aa10.01□□□□□ -0.81
COL4A1-202ENST00000467182 HBE1P02100 147 aa10.01□□□□□ -0.81
COL4A1-202ENST00000467182 IL4P05112 153 aa10.01□□□□□ -0.81
COL4A1-202ENST00000467182 ORM2P19652 201 aa10.01□□□□□ -0.81
COL4A1-202ENST00000467182 ARL3P36405 182 aa10.01□□□□□ -0.81
COL4A1-202ENST00000467182 LYZP61626 148 aa10.01□□□□□ -0.81
COL4A1-202ENST00000467182 C10orf113Q5VZT2 155 aa10.01□□□□□ -0.81
COL4A1-202ENST00000467182 TOMM20LQ6UXN7 152 aa10.01□□□□□ -0.81
COL4A1-202ENST00000467182 EIF4E3Q8N5X7 224 aaKnown RBP10.01□□□□□ -0.81
COL4A1-202ENST00000467182 OR5AU1Q8NGC0 362 aa10.01□□□□□ -0.81
COL4A1-202ENST00000467182 Q8WTZ3 238 aa10.01□□□□□ -0.81
COL4A1-202ENST00000467182 MARC2Q969Z3 335 aa10.01□□□□□ -0.81
COL4A1-202ENST00000467182 RNF125Q96EQ8 232 aa10.01□□□□□ -0.81
COL4A1-202ENST00000467182 UBE2E2Q96LR5 201 aa10.01□□□□□ -0.81
COL4A1-202ENST00000467182 UHRF2Q96PU4 802 aa10.01□□□□□ -0.81
COL4A1-202ENST00000467182 RNF2Q99496 336 aa10.01□□□□□ -0.81
COL4A1-202ENST00000467182 SLC25A2Q9BXI2 301 aa10.01□□□□□ -0.81
COL4A1-202ENST00000467182 TMPRSS5Q9H3S3 457 aa10.01□□□□□ -0.81
COL4A1-202ENST00000467182 PUS1Q9Y606 427 aaKnown RBP eCLIP10.01□□□□□ -0.81
COL4A1-202ENST00000467182 IGHV3-35A0A0C4DH35 117 aa10□□□□□ -0.81
COL4A1-202ENST00000467182 ANKRD34BA5PLL1 514 aa10□□□□□ -0.81
COL4A1-202ENST00000467182 NUDT19A8MXV4 375 aa10□□□□□ -0.81
COL4A1-202ENST00000467182 BMPR1BO00238 502 aa10□□□□□ -0.81
COL4A1-202ENST00000467182 SCGB2A1O75556 95 aa10□□□□□ -0.81
COL4A1-202ENST00000467182 SRSF3P84103 164 aaKnown RBP10□□□□□ -0.81
COL4A1-202ENST00000467182 PMS2P11Q13670 270 aa10□□□□□ -0.81
COL4A1-202ENST00000467182 LINC00305Q7Z4B0 112 aa10□□□□□ -0.81
COL4A1-202ENST00000467182 FAM210AQ96ND0 272 aa10□□□□□ -0.81
COL4A1-202ENST00000467182 CLPSL1A2RUU4 121 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms