RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 PLEKHG7Q6ZR37 379 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 RASSF6Q6ZTQ3 369 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 ARPINQ7Z6K5 226 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 CROCCP2Q86T23 111 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 LINC00311Q8N616 119 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 C8orf31Q8N9H6 132 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 LFNGQ8NES3 379 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 OR5T1Q8NG75 326 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 OR51T1Q8NGJ9 327 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 OR5D18Q8NGL1 313 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 LYPD6BQ8NI32 183 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 TEX47Q8TBZ9 253 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 C15orf40Q8WUR7 153 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 ASB17Q8WXJ9 295 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 PP6455Q8WZ26 134 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 ARL11Q969Q4 196 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 PYURFQ96I23 114 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 APOL4Q9BPW4 351 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 CHST5Q9GZS9 411 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 FBXL15Q9H469 300 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 LINC00574Q9H8X3 128 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 CMC2Q9NRP2 79 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 ARMC1Q9NVT9 282 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 CMTM6Q9NX76 183 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 PEF1Q9UBV8 284 aaKnown RBP1.72□□□□□ -2.13
XRN1-206ENST00000467077 OR52A1Q9UKL2 312 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 APLNQ9ULZ1 77 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 AP3M1Q9Y2T2 418 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 NUBP2Q9Y5Y2 271 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 TMEM14AQ9Y6G1 99 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 R4GMQ9 66 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 PKD1P98161 4303 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 UBR4Q5T4S7 5183 aa1.72□□□□□ -2.13
XRN1-206ENST00000467077 IGKV1-9A0A0C4DH69 117 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 IGKV1-12A0A0C4DH73 117 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 TMEM30CPA0ZSE6 113 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 C2orf70A6NJV1 201 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 H7C2Y5 167 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 TNFRSF11BO00300 401 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 DEFB4AO15263 64 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 RBFOX2O43251 390 aaKnown RBP eCLIP1.71□□□□□ -2.14
XRN1-206ENST00000467077 ORC5O43913 435 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 OR2A4O95047 310 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 RPP14O95059 124 aaKnown RBP1.71□□□□□ -2.14
XRN1-206ENST00000467077 CCNB2O95067 398 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 CA2P00918 260 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 IGKV1D-12P01611 117 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 APELAP0DMC3 54 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 INAFM2P0DMQ5 153 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 P0DMU3 169 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 FAM231AP0DMU4 169 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 FAM231CP0DMU5 169 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 CT45A6P0DMU7 189 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 CT45A5P0DMU8 189 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 CT45A7P0DMV0 189 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 ATF1P18846 271 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 RAB3AP20336 220 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 GZMHP20718 246 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 PRKACBP22694 351 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 DTYMKP23919 212 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 LGALS7P47929 136 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 CXCR4P61073 352 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 CT45A1Q5HYN5 189 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 UBE2UQ5VVX9 321 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 CD200R1LQ6Q8B3 271 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 ARRDC1Q8N5I2 433 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 CT45A3Q8NHU0 189 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 COQ8AQ8NI60 647 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 GRPEL2Q8TAA5 225 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 NEK7Q8TDX7 302 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 CACNG8Q8WXS5 425 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 TMEM230Q96A57 120 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 MRPS24Q96EL2 167 aaKnown RBP1.71□□□□□ -2.14
XRN1-206ENST00000467077 ADAT3Q96EY9 351 aaPredicted RBP1.71□□□□□ -2.14
XRN1-206ENST00000467077 LINC00477Q96M19 166 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 OPALINQ96PE5 141 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 TIMM17AQ99595 171 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 HOPXQ9BPY8 73 aaPredicted RBP1.71□□□□□ -2.14
XRN1-206ENST00000467077 ACTR3CQ9C0K3 210 aaPredicted RBP1.71□□□□□ -2.14
XRN1-206ENST00000467077 YIPF3Q9GZM5 350 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 RHOFQ9HBH0 211 aa1.71□□□□□ -2.14
XRN1-206ENST00000467077 METTL1Q9UBP6 276 aaKnown RBP1.71□□□□□ -2.14
XRN1-206ENST00000467077 V9GYY5 206 aaPredicted RBP1.71□□□□□ -2.14
XRN1-206ENST00000467077 TRAV10A0A0B4J240 114 aa1.7□□□□□ -2.14
XRN1-206ENST00000467077 A0A0U1RQV1 116 aa1.7□□□□□ -2.14
XRN1-206ENST00000467077 LOC107986453A0A1B0GWG9 222 aa1.7□□□□□ -2.14
XRN1-206ENST00000467077 TMEM223A0PJW6 202 aa1.7□□□□□ -2.14
XRN1-206ENST00000467077 PPP5D1E7EU14 171 aa1.7□□□□□ -2.14
XRN1-206ENST00000467077 ZNF670-ZNF695F2Z2N8 137 aa1.7□□□□□ -2.14
XRN1-206ENST00000467077 C15orf65H3BRN8 121 aa1.7□□□□□ -2.14
XRN1-206ENST00000467077 TEX46H3BTG2 121 aa1.7□□□□□ -2.14
XRN1-206ENST00000467077 H3BUA1 57 aa1.7□□□□□ -2.14
XRN1-206ENST00000467077 K7EMT4 169 aa1.7□□□□□ -2.14
XRN1-206ENST00000467077 AIPO00170 330 aa1.7□□□□□ -2.14
XRN1-206ENST00000467077 SLC22A1O15245 554 aa1.7□□□□□ -2.14
XRN1-206ENST00000467077 ZNF207O43670 478 aaKnown RBP1.7□□□□□ -2.14
XRN1-206ENST00000467077 YIF1AO95070 293 aa1.7□□□□□ -2.14
XRN1-206ENST00000467077 NDUFA3O95167 84 aa1.7□□□□□ -2.14
XRN1-206ENST00000467077 IFNA10P01566 189 aa1.7□□□□□ -2.14
XRN1-206ENST00000467077 IFNA21P01568 189 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms