RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 MIEN1Q9BRT3 115 aa7.46□□□□□ -1.22
HPS4-208ENST00000464362 LAMTOR2Q9Y2Q5 125 aa7.46□□□□□ -1.22
HPS4-208ENST00000464362 EML6Q6ZMW3 1958 aa7.46□□□□□ -1.22
HPS4-208ENST00000464362 TRBV9A0A0B4J1U6 114 aa7.46□□□□□ -1.22
HPS4-208ENST00000464362 TMEM78Q5T7P6 136 aa7.46□□□□□ -1.22
HPS4-208ENST00000464362 Q6ZR03 302 aa7.46□□□□□ -1.22
HPS4-208ENST00000464362 EXOC3-AS1Q8N2X6 119 aa7.46□□□□□ -1.22
HPS4-208ENST00000464362 DPF1Q92782 380 aa7.46□□□□□ -1.22
HPS4-208ENST00000464362 IGLV3-1P01715 115 aa7.45□□□□□ -1.22
HPS4-208ENST00000464362 BMI1P35226 326 aa7.45□□□□□ -1.22
HPS4-208ENST00000464362 LOXL3P58215 753 aa7.45□□□□□ -1.22
HPS4-208ENST00000464362 PLP1P60201 277 aa7.45□□□□□ -1.22
HPS4-208ENST00000464362 OR10AG1Q8NH19 301 aa7.45□□□□□ -1.22
HPS4-208ENST00000464362 C16orf92Q96LL3 132 aa7.45□□□□□ -1.22
HPS4-208ENST00000464362 MBNL3Q9NUK0 354 aaKnown RBP7.45□□□□□ -1.22
HPS4-208ENST00000464362 A0A1B0GUT8 65 aa7.45□□□□□ -1.22
HPS4-208ENST00000464362 LDLRAD2Q5SZI1 272 aa7.45□□□□□ -1.22
HPS4-208ENST00000464362 PET117Q6UWS5 81 aa7.45□□□□□ -1.22
HPS4-208ENST00000464362 NUDT10Q8NFP7 164 aa7.45□□□□□ -1.22
HPS4-208ENST00000464362 CACNG8Q8WXS5 425 aa7.45□□□□□ -1.22
HPS4-208ENST00000464362 GRAMD2BQ96HH9 432 aa7.45□□□□□ -1.22
HPS4-208ENST00000464362 RPP21Q9H633 154 aaKnown RBP7.45□□□□□ -1.22
HPS4-208ENST00000464362 ZFP30Q9Y2G7 519 aa7.45□□□□□ -1.22
HPS4-208ENST00000464362 TRANK1O15050 2925 aa7.45□□□□□ -1.22
HPS4-208ENST00000464362 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.45□□□□□ -1.22
HPS4-208ENST00000464362 IZUMO1RA6ND01 250 aa7.45□□□□□ -1.22
HPS4-208ENST00000464362 LIPFP07098 398 aa7.45□□□□□ -1.22
HPS4-208ENST00000464362 GPR183P32249 361 aa7.45□□□□□ -1.22
HPS4-208ENST00000464362 SRSF7Q16629 238 aaKnown RBP eCLIP7.45□□□□□ -1.22
HPS4-208ENST00000464362 Q6ZS49 121 aa7.45□□□□□ -1.22
HPS4-208ENST00000464362 MYOZ3Q8TDC0 251 aa7.45□□□□□ -1.22
HPS4-208ENST00000464362 NAA38Q9BRA0 125 aaKnown RBP7.45□□□□□ -1.22
HPS4-208ENST00000464362 TRAV8-6A0A0B4J262 113 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 CCDC144NLQ6NUI1 221 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 C12orf54Q6X4T0 127 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 TEX45Q8NA69 505 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.44□□□□□ -1.22
HPS4-208ENST00000464362 LINC00527Q9UJ94 153 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 EPDR1Q9UM22 224 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 TRBV6-6A0A0A6YYG2 114 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 A6NDN8 102 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 CLEC2AQ6UVW9 174 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 PPP1R27Q86WC6 154 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 DEFB104AQ8WTQ1 72 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 OSTCQ9NRP0 149 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 LOC105371242A0A075B767 164 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 A0A1W2PRE2 83 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 NPIPB11E5RHQ5 1161 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 ZNF474Q6S9Z5 364 aaPredicted RBP7.44□□□□□ -1.22
HPS4-208ENST00000464362 CIARTQ8N365 385 aaPredicted RBP7.44□□□□□ -1.22
HPS4-208ENST00000464362 SLC25A15Q9Y619 301 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 USP9YO00507 2555 aaPredicted RBP7.44□□□□□ -1.22
HPS4-208ENST00000464362 TM4SF5O14894 197 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 CX3CL1P78423 397 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 NEUROG1Q92886 237 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 DPM3Q9P2X0 92 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 CDC42EP3Q9UKI2 254 aa7.44□□□□□ -1.22
HPS4-208ENST00000464362 H7C2G1 150 aa7.43□□□□□ -1.22
HPS4-208ENST00000464362 CDKN1AP38936 164 aa7.43□□□□□ -1.22
HPS4-208ENST00000464362 FOXL1Q12952 345 aa7.43□□□□□ -1.22
HPS4-208ENST00000464362 PRSS8Q16651 343 aa7.43□□□□□ -1.22
HPS4-208ENST00000464362 SCRT1Q9BWW7 348 aa7.43□□□□□ -1.22
HPS4-208ENST00000464362 LSM4Q9Y4Z0 139 aaKnown RBP7.43□□□□□ -1.22
HPS4-208ENST00000464362 TCRBV4S1A1TA0A5B7 111 aa7.43□□□□□ -1.22
HPS4-208ENST00000464362 PMS2P5A8MQ11 134 aa7.43□□□□□ -1.22
HPS4-208ENST00000464362 M0R381 172 aa7.43□□□□□ -1.22
HPS4-208ENST00000464362 MMP23AO75900 390 aa7.43□□□□□ -1.22
HPS4-208ENST00000464362 AREGP15514 252 aa7.43□□□□□ -1.22
HPS4-208ENST00000464362 APOBEC3AP31941 199 aaPredicted RBP7.43□□□□□ -1.22
HPS4-208ENST00000464362 ACTL10Q5JWF8 245 aa7.43□□□□□ -1.22
HPS4-208ENST00000464362 IGFL4Q6B9Z1 124 aa7.43□□□□□ -1.22
HPS4-208ENST00000464362 LYPD2Q6UXB3 125 aa7.43□□□□□ -1.22
HPS4-208ENST00000464362 SSC4DQ8WTU2 575 aa7.43□□□□□ -1.22
HPS4-208ENST00000464362 PLSCR4Q9NRQ2 329 aa7.43□□□□□ -1.22
HPS4-208ENST00000464362 TRBV20OR9-2A0A075B6H5 130 aa7.43□□□□□ -1.22
HPS4-208ENST00000464362 M0R3E3 92 aa7.43□□□□□ -1.22
HPS4-208ENST00000464362 TMEM200BQ69YZ2 307 aa7.43□□□□□ -1.22
HPS4-208ENST00000464362 FAM57AQ8TBR7 257 aa7.43□□□□□ -1.22
HPS4-208ENST00000464362 RNASE6Q93091 150 aaKnown RBP7.43□□□□□ -1.22
HPS4-208ENST00000464362 PRELID3AQ96N28 172 aa7.43□□□□□ -1.22
HPS4-208ENST00000464362 SH2D7A6NKC9 451 aaPredicted RBP7.42□□□□□ -1.22
HPS4-208ENST00000464362 TIMM23O14925 209 aa7.42□□□□□ -1.22
HPS4-208ENST00000464362 C3orf79P0CE67 100 aa7.42□□□□□ -1.22
HPS4-208ENST00000464362 ZNF134P52741 427 aa7.42□□□□□ -1.22
HPS4-208ENST00000464362 SAMD13Q5VXD3 122 aa7.42□□□□□ -1.22
HPS4-208ENST00000464362 SFTA2Q6UW10 78 aa7.42□□□□□ -1.22
HPS4-208ENST00000464362 RBPMS2Q6ZRY4 209 aaKnown RBP7.42□□□□□ -1.22
HPS4-208ENST00000464362 NIT1Q86X76 327 aa7.42□□□□□ -1.22
HPS4-208ENST00000464362 BEND2Q8NDZ0 799 aa7.42□□□□□ -1.22
HPS4-208ENST00000464362 TMEM160Q9NX00 188 aa7.42□□□□□ -1.22
HPS4-208ENST00000464362 KLF2Q9Y5W3 355 aaPredicted RBP7.42□□□□□ -1.22
HPS4-208ENST00000464362 TANC2Q9HCD6 1990 aa7.42□□□□□ -1.22
HPS4-208ENST00000464362 RIPPLY3P57055 190 aa7.42□□□□□ -1.22
HPS4-208ENST00000464362 FAM74A4Q5TZK3 123 aa7.42□□□□□ -1.22
HPS4-208ENST00000464362 TMEM133Q9H2Q1 129 aa7.42□□□□□ -1.22
HPS4-208ENST00000464362 C21orf62Q9NYP8 219 aa7.42□□□□□ -1.22
HPS4-208ENST00000464362 FBXL7Q9UJT9 491 aa7.42□□□□□ -1.22
HPS4-208ENST00000464362 CHD8Q9HCK8 2581 aa7.42□□□□□ -1.22
HPS4-208ENST00000464362 LOC107984156A0A0G2JMH3 177 aa7.42□□□□□ -1.22
HPS4-208ENST00000464362 B9A039 149 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms