RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 IL4P05112 153 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 CELA2AP08217 269 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 VEGFBP49765 207 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 VMA21Q3ZAQ7 101 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 PRNTQ86SH4 94 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 CIARTQ8N365 385 aaPredicted RBP3.15□□□□□ -1.91
CCNL1-204ENST00000464316 TEX29Q8N6K0 151 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 MYOZ3Q8TDC0 251 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 GTSF1Q8WW33 167 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 CHAC1Q9BUX1 264 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 PROK2Q9HC23 129 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 IGHV5-10-1A0A0J9YXX1 117 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 GAGE5Q13069 117 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 GAGE6Q13070 117 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 KLF17Q5JT82 389 aaPredicted RBP3.15□□□□□ -1.91
CCNL1-204ENST00000464316 ZNF826PQ6ZT77 177 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 FLYWCH2Q96CP2 140 aaKnown RBP3.15□□□□□ -1.91
CCNL1-204ENST00000464316 ZNF503Q96F45 646 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 FAM167A-AS1Q96KT0 104 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 JMJD8Q96S16 334 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 Q9H3A6 140 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 C12orf49Q9H741 205 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 SELENOKQ9Y6D0 94 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 PRR33A8MZF0 331 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 C22orf46C9J442 243 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 KLRC4-KLRK1H3BQV0 150 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 WNT9BO14905 357 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 DPM2O94777 84 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 LTAP01374 205 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 RNASE2P10153 161 aaKnown RBP3.14□□□□□ -1.91
CCNL1-204ENST00000464316 LINC00205P59089 165 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 GNG5P63218 68 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 ZFAND6Q6FIF0 208 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 Q6ZS52 159 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 SLC25A45Q8N413 288 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 TMEM116Q8NCL8 245 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 SMRP1Q8NCR6 262 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 ATP6V0E2Q8NHE4 81 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 PIFOQ8TCI5 191 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 KLF14Q8TD94 323 aaPredicted RBP3.14□□□□□ -1.91
CCNL1-204ENST00000464316 ARPC1AQ92747 370 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 URB1-AS1Q96HZ7 61 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 SGK494Q96LW2 274 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 SCNM1Q9BWG6 230 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 AAMDCQ9H7C9 122 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 NXT2Q9NPJ8 142 aaKnown RBP3.14□□□□□ -1.91
CCNL1-204ENST00000464316 SPANXB1Q9NS25 103 aaPredicted RBP3.14□□□□□ -1.91
CCNL1-204ENST00000464316 HIGD1AQ9Y241 93 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 USF3Q68DE3 2245 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 C10orf142B7Z368 130 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 C15orf65H3BRN8 121 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 SCGB2A1O75556 95 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 IGKCP01834 107 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 RFPL3SP0C7P2 107 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 KLRD1Q13241 179 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 TM4SF20Q53R12 229 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 TTC32Q5I0X7 151 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 CEND1Q8N111 149 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 RPEQ96AT9 228 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 FXYD5Q96DB9 178 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 HARBI1Q96MB7 349 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 MLST8Q9BVC4 326 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 C19orf71A6NCJ1 209 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 IGLL5B9A064 214 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 NPIPB6E9PJ23 425 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 E9PLD3 99 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 LINC01565O15544 149 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 HOXA3O43365 443 aaPredicted RBP3.14□□□□□ -1.91
CCNL1-204ENST00000464316 ACP1P24666 158 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 FCGR2BP31994 310 aaPredicted RBP3.14□□□□□ -1.91
CCNL1-204ENST00000464316 ARL3P36405 182 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 IFI27P40305 119 aaPredicted RBP3.14□□□□□ -1.91
CCNL1-204ENST00000464316 WFDC2Q14508 124 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 CCDC144NLQ6NUI1 221 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 GOLT1AQ6ZVE7 132 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 WDR86Q86TI4 376 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 DLX4Q92988 240 aaPredicted RBP3.14□□□□□ -1.91
CCNL1-204ENST00000464316 SPAG8Q99932 426 aaPredicted RBP3.14□□□□□ -1.91
CCNL1-204ENST00000464316 TM2D2Q9BX73 214 aa3.14□□□□□ -1.91
CCNL1-204ENST00000464316 COLQQ9Y215 455 aaPredicted RBP3.14□□□□□ -1.91
CCNL1-204ENST00000464316 KLF13Q9Y2Y9 288 aaPredicted RBP3.14□□□□□ -1.91
CCNL1-204ENST00000464316 ZNF407Q9C0G0 2248 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 ZNHIT1O43257 154 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 IGHV3-13P01766 116 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 SAA2P0DJI9 122 aaPredicted RBP3.13□□□□□ -1.91
CCNL1-204ENST00000464316 FGF6P10767 208 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 C5orf64Q2M2E5 130 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 GUSBP11Q6P575 273 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 ZNF562Q6V9R5 426 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 Q6ZS92 163 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 C8orf86Q6ZUL3 223 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 C8orf46Q8TAG6 207 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 ZC2HC1AQ96GY0 325 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 TP73-AS1Q9UF72 201 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 SRRM4A7MD48 611 aaKnown RBP3.13□□□□□ -1.91
CCNL1-204ENST00000464316 D6R8Y8 96 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 H3BMG7 143 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 TM4SF5O14894 197 aa3.13□□□□□ -1.91
CCNL1-204ENST00000464316 PLAUP00749 431 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms