RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 CLEC2AQ6UVW9 174 aa17.26■□□□□ 0.35
PDLIM2-216ENST00000464275 OR1L6Q8NGR2 347 aa17.26■□□□□ 0.35
PDLIM2-216ENST00000464275 TRAPPC1Q9Y5R8 145 aa17.26■□□□□ 0.35
PDLIM2-216ENST00000464275 COX7A2P2O60397 106 aa17.25■□□□□ 0.35
PDLIM2-216ENST00000464275 TMEM11P17152 192 aa17.24■□□□□ 0.35
PDLIM2-216ENST00000464275 RPL19P84098 196 aaKnown RBP17.24■□□□□ 0.35
PDLIM2-216ENST00000464275 PAX1P15863 534 aa17.24■□□□□ 0.35
PDLIM2-216ENST00000464275 C10orf113Q5VZT2 155 aa17.24■□□□□ 0.35
PDLIM2-216ENST00000464275 RUSC1-AS1Q66K80 236 aa17.24■□□□□ 0.35
PDLIM2-216ENST00000464275 OCC1Q8TAD7 63 aa17.24■□□□□ 0.35
PDLIM2-216ENST00000464275 ZNF503Q96F45 646 aa17.24■□□□□ 0.35
PDLIM2-216ENST00000464275 AJUBAQ96IF1 538 aa17.24■□□□□ 0.35
PDLIM2-216ENST00000464275 IL36BQ9NZH7 164 aa17.24■□□□□ 0.35
PDLIM2-216ENST00000464275 NCBP2LA6PVI3 153 aaKnown RBP17.23■□□□□ 0.35
PDLIM2-216ENST00000464275 OR7C2O60412 319 aa17.23■□□□□ 0.35
PDLIM2-216ENST00000464275 FAM106CPP0CH98 169 aa17.23■□□□□ 0.35
PDLIM2-216ENST00000464275 GZMBP10144 247 aa17.23■□□□□ 0.35
PDLIM2-216ENST00000464275 BRS3P32247 399 aa17.23■□□□□ 0.35
PDLIM2-216ENST00000464275 PAX8Q06710 450 aa17.23■□□□□ 0.35
PDLIM2-216ENST00000464275 CLEC12BQ2HXU8 276 aa17.23■□□□□ 0.35
PDLIM2-216ENST00000464275 C9orf152Q5JTZ5 239 aa17.23■□□□□ 0.35
PDLIM2-216ENST00000464275 ZNF562Q6V9R5 426 aa17.23■□□□□ 0.35
PDLIM2-216ENST00000464275 MED13LQ71F56 2210 aa17.23■□□□□ 0.35
PDLIM2-216ENST00000464275 IGHV4-61A0A0C4DH41 118 aa17.22■□□□□ 0.35
PDLIM2-216ENST00000464275 I3L2K1 104 aa17.22■□□□□ 0.35
PDLIM2-216ENST00000464275 PATE2Q6UY27 113 aa17.22■□□□□ 0.35
PDLIM2-216ENST00000464275 NOL4LQ96MY1 436 aaPredicted RBP17.22■□□□□ 0.35
PDLIM2-216ENST00000464275 IGHV3-21A0A0B4J1V1 117 aa17.22■□□□□ 0.35
PDLIM2-216ENST00000464275 NPFFO15130 113 aa17.22■□□□□ 0.35
PDLIM2-216ENST00000464275 OR10J4P0C629 311 aa17.22■□□□□ 0.35
PDLIM2-216ENST00000464275 SAA4P35542 130 aa17.22■□□□□ 0.35
PDLIM2-216ENST00000464275 GBGT1Q8N5D6 347 aa17.22■□□□□ 0.35
PDLIM2-216ENST00000464275 FAM167A-AS1Q96KT0 104 aa17.22■□□□□ 0.35
PDLIM2-216ENST00000464275 SLC25A2Q9BXI2 301 aa17.22■□□□□ 0.35
PDLIM2-216ENST00000464275 C1RLQ9NZP8 487 aa17.22■□□□□ 0.35
PDLIM2-216ENST00000464275 ABCA2Q9BZC7 2435 aa17.22■□□□□ 0.35
PDLIM2-216ENST00000464275 DDTP30046 118 aa17.21■□□□□ 0.35
PDLIM2-216ENST00000464275 ARPC1AQ92747 370 aa17.21■□□□□ 0.35
PDLIM2-216ENST00000464275 TRBV9A0A0B4J1U6 114 aa17.2■□□□□ 0.34
PDLIM2-216ENST00000464275 CX3CL1P78423 397 aa17.2■□□□□ 0.34
PDLIM2-216ENST00000464275 FAM103A1Q9BTL3 118 aaKnown RBP17.2■□□□□ 0.34
PDLIM2-216ENST00000464275 CENPVL3A0A0U1RRI6 287 aa17.2■□□□□ 0.34
PDLIM2-216ENST00000464275 PGPEP1LA6NFU8 196 aa17.2■□□□□ 0.34
PDLIM2-216ENST00000464275 ZNF355PQ9NSJ1 428 aa17.2■□□□□ 0.34
PDLIM2-216ENST00000464275 AURKAIP1Q9NWT8 199 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-216ENST00000464275 A0A1W2PRE2 83 aa17.19■□□□□ 0.34
PDLIM2-216ENST00000464275 NPIPB5A8MRT5 1133 aa17.19■□□□□ 0.34
PDLIM2-216ENST00000464275 COX19Q49B96 90 aa17.19■□□□□ 0.34
PDLIM2-216ENST00000464275 MORN5Q5VZ52 161 aa17.19■□□□□ 0.34
PDLIM2-216ENST00000464275 REC114Q7Z4M0 266 aa17.19■□□□□ 0.34
PDLIM2-216ENST00000464275 OR5AU1Q8NGC0 362 aa17.19■□□□□ 0.34
PDLIM2-216ENST00000464275 TACC2O95359 2948 aa17.19■□□□□ 0.34
PDLIM2-216ENST00000464275 TRAV5A0A0B4J249 113 aa17.19■□□□□ 0.34
PDLIM2-216ENST00000464275 RD3LP0DJH9 198 aa17.19■□□□□ 0.34
PDLIM2-216ENST00000464275 IQCJQ1A5X6 159 aa17.19■□□□□ 0.34
PDLIM2-216ENST00000464275 FAM120AOSQ5T036 256 aa17.19■□□□□ 0.34
PDLIM2-216ENST00000464275 PERPQ96FX8 193 aa17.19■□□□□ 0.34
PDLIM2-216ENST00000464275 COX6B1P14854 86 aa17.18■□□□□ 0.34
PDLIM2-216ENST00000464275 GNG4P50150 75 aa17.18■□□□□ 0.34
PDLIM2-216ENST00000464275 PLP1P60201 277 aa17.18■□□□□ 0.34
PDLIM2-216ENST00000464275 Q8N9W7 124 aa17.18■□□□□ 0.34
PDLIM2-216ENST00000464275 IGHV4-30-2A0A087WSY4 118 aa17.17■□□□□ 0.34
PDLIM2-216ENST00000464275 HELTA6NFD8 242 aa17.17■□□□□ 0.34
PDLIM2-216ENST00000464275 K7EIM0 57 aa17.17■□□□□ 0.34
PDLIM2-216ENST00000464275 K7EN84 100 aa17.17■□□□□ 0.34
PDLIM2-216ENST00000464275 IGLC1P0CG04 106 aa17.17■□□□□ 0.34
PDLIM2-216ENST00000464275 DSCR9P59020 149 aa17.17■□□□□ 0.34
PDLIM2-216ENST00000464275 RPEL1Q2QD12 228 aa17.17■□□□□ 0.34
PDLIM2-216ENST00000464275 ASPHD1Q5U4P2 390 aa17.17■□□□□ 0.34
PDLIM2-216ENST00000464275 LINC00305Q7Z4B0 112 aa17.17■□□□□ 0.34
PDLIM2-216ENST00000464275 TTC9CQ8N5M4 171 aa17.17■□□□□ 0.34
PDLIM2-216ENST00000464275 ORM2P19652 201 aa17.17■□□□□ 0.34
PDLIM2-216ENST00000464275 UBE2L3P68036 154 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-216ENST00000464275 SRSF1Q07955 248 aaKnown RBP eCLIP17.17■□□□□ 0.34
PDLIM2-216ENST00000464275 LBHQ53QV2 105 aaPredicted RBP17.17■□□□□ 0.34
PDLIM2-216ENST00000464275 PIP4P2Q8N4L2 257 aa17.17■□□□□ 0.34
PDLIM2-216ENST00000464275 OR1B1Q8NGR6 318 aa17.17■□□□□ 0.34
PDLIM2-216ENST00000464275 PAXXQ9BUH6 204 aa17.17■□□□□ 0.34
PDLIM2-216ENST00000464275 EPG5Q9HCE0 2579 aa17.16■□□□□ 0.34
PDLIM2-216ENST00000464275 SPTAN1Q13813 2472 aaKnown RBP17.16■□□□□ 0.34
PDLIM2-216ENST00000464275 HYPMO75409 117 aa17.16■□□□□ 0.34
PDLIM2-216ENST00000464275 NDPQ00604 133 aa17.16■□□□□ 0.34
PDLIM2-216ENST00000464275 GSX1Q9H4S2 264 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-216ENST00000464275 OSTCQ9NRP0 149 aa17.16■□□□□ 0.34
PDLIM2-216ENST00000464275 HLA-DRB1P01911 266 aa17.15■□□□□ 0.34
PDLIM2-216ENST00000464275 TIGITQ495A1 244 aa17.15■□□□□ 0.34
PDLIM2-216ENST00000464275 C14orf144Q96I85 54 aa17.15■□□□□ 0.34
PDLIM2-216ENST00000464275 RBM14Q96PK6 669 aaKnown RBP17.15■□□□□ 0.34
PDLIM2-216ENST00000464275 RASL11BQ9BPW5 248 aa17.15■□□□□ 0.34
PDLIM2-216ENST00000464275 USP9XQ93008 2570 aaPredicted RBP17.15■□□□□ 0.34
PDLIM2-216ENST00000464275 IGHV7-81A0A0B4J1V7 117 aa17.15■□□□□ 0.34
PDLIM2-216ENST00000464275 MT-ND6P03923 174 aa17.15■□□□□ 0.34
PDLIM2-216ENST00000464275 CENPWQ5EE01 88 aa17.15■□□□□ 0.34
PDLIM2-216ENST00000464275 STXBP6Q8NFX7 210 aa17.15■□□□□ 0.34
PDLIM2-216ENST00000464275 IGLV11-55A0A075B6I3 123 aa17.14■□□□□ 0.33
PDLIM2-216ENST00000464275 IGHV1-69DA0A0B4J2H0 117 aa17.14■□□□□ 0.33
PDLIM2-216ENST00000464275 IGHV1-69P01742 117 aa17.14■□□□□ 0.33
PDLIM2-216ENST00000464275 ESDP10768 282 aa17.14■□□□□ 0.33
PDLIM2-216ENST00000464275 WDR73Q6P4I2 378 aa17.14■□□□□ 0.33
PDLIM2-216ENST00000464275 V9GYV3 84 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms