RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ARL2-SNX15V9GYD0 113 aa10.08□□□□□ -0.8
VAPB-203ENST00000463370 F8W735 103 aaPredicted RBP10.08□□□□□ -0.8
VAPB-203ENST00000463370 H7BYZ3 331 aa10.08□□□□□ -0.8
VAPB-203ENST00000463370 HYPMO75409 117 aa10.08□□□□□ -0.8
VAPB-203ENST00000463370 IGHV3-23P01764 117 aa10.08□□□□□ -0.8
VAPB-203ENST00000463370 PFN1P07737 140 aaKnown RBP10.08□□□□□ -0.8
VAPB-203ENST00000463370 TTC9CQ8N5M4 171 aa10.08□□□□□ -0.8
VAPB-203ENST00000463370 FAM210BQ96KR6 192 aa10.08□□□□□ -0.8
VAPB-203ENST00000463370 LINC00479Q96M42 142 aa10.08□□□□□ -0.8
VAPB-203ENST00000463370 RASL11BQ9BPW5 248 aa10.08□□□□□ -0.8
VAPB-203ENST00000463370 ZANQ9Y493 2812 aa10.07□□□□□ -0.8
VAPB-203ENST00000463370 IGHV1-69DA0A0B4J2H0 117 aa10.07□□□□□ -0.8
VAPB-203ENST00000463370 A0A0U1RQK1 487 aa10.07□□□□□ -0.8
VAPB-203ENST00000463370 A0A1W2PRE2 83 aa10.07□□□□□ -0.8
VAPB-203ENST00000463370 H3BTX0 84 aa10.07□□□□□ -0.8
VAPB-203ENST00000463370 IGHV1-69P01742 117 aa10.07□□□□□ -0.8
VAPB-203ENST00000463370 BRS3P32247 399 aa10.07□□□□□ -0.8
VAPB-203ENST00000463370 KRTAP10-9P60411 292 aa10.07□□□□□ -0.8
VAPB-203ENST00000463370 BCL6BQ8N143 479 aaPredicted RBP10.07□□□□□ -0.8
VAPB-203ENST00000463370 PTPN13Q12923 2485 aa10.07□□□□□ -0.8
VAPB-203ENST00000463370 NDUFB8O95169 186 aa10.07□□□□□ -0.8
VAPB-203ENST00000463370 HLA-DRB1P01911 266 aa10.07□□□□□ -0.8
VAPB-203ENST00000463370 COX6B1P14854 86 aa10.07□□□□□ -0.8
VAPB-203ENST00000463370 GALR1P47211 349 aa10.07□□□□□ -0.8
VAPB-203ENST00000463370 PLP1P60201 277 aa10.07□□□□□ -0.8
VAPB-203ENST00000463370 SNRPEP62304 92 aaKnown RBP10.07□□□□□ -0.8
VAPB-203ENST00000463370 PIFOQ8TCI5 191 aa10.07□□□□□ -0.8
VAPB-203ENST00000463370 CHD6Q8TD26 2715 aa10.06□□□□□ -0.8
VAPB-203ENST00000463370 USP9YO00507 2555 aaPredicted RBP10.06□□□□□ -0.8
VAPB-203ENST00000463370 OR2J3O76001 311 aa10.06□□□□□ -0.8
VAPB-203ENST00000463370 RD3LP0DJH9 198 aa10.06□□□□□ -0.8
VAPB-203ENST00000463370 BLNKQ8WV28 456 aa10.06□□□□□ -0.8
VAPB-203ENST00000463370 TENM4Q6N022 2769 aa10.06□□□□□ -0.8
VAPB-203ENST00000463370 ABCA12Q86UK0 2595 aa10.06□□□□□ -0.8
VAPB-203ENST00000463370 TRBV24-1A0A075B6N3 115 aa10.06□□□□□ -0.8
VAPB-203ENST00000463370 ATP6V0E1O15342 81 aa10.06□□□□□ -0.8
VAPB-203ENST00000463370 AVPP01185 164 aa10.06□□□□□ -0.8
VAPB-203ENST00000463370 TRGC2P03986 189 aa10.06□□□□□ -0.8
VAPB-203ENST00000463370 GP9P14770 177 aa10.06□□□□□ -0.8
VAPB-203ENST00000463370 RANP62826 216 aaKnown RBP10.06□□□□□ -0.8
VAPB-203ENST00000463370 OR5I1Q13606 314 aa10.06□□□□□ -0.8
VAPB-203ENST00000463370 CENPWQ5EE01 88 aa10.06□□□□□ -0.8
VAPB-203ENST00000463370 ZNF329Q86UD4 541 aa10.06□□□□□ -0.8
VAPB-203ENST00000463370 C1QL4Q86Z23 238 aa10.06□□□□□ -0.8
VAPB-203ENST00000463370 SFRP2Q96HF1 295 aa10.06□□□□□ -0.8
VAPB-203ENST00000463370 C1RLQ9NZP8 487 aa10.06□□□□□ -0.8
VAPB-203ENST00000463370 PRELID1Q9Y255 219 aa10.06□□□□□ -0.8
VAPB-203ENST00000463370 HELTA6NFD8 242 aa10.05□□□□□ -0.8
VAPB-203ENST00000463370 MSMBP08118 114 aa10.05□□□□□ -0.8
VAPB-203ENST00000463370 FAM3BP58499 235 aaPredicted RBP10.05□□□□□ -0.8
VAPB-203ENST00000463370 ECSCRQ19T08 205 aa10.05□□□□□ -0.8
VAPB-203ENST00000463370 OR1L6Q8NGR2 347 aa10.05□□□□□ -0.8
VAPB-203ENST00000463370 ANAPC16Q96DE5 110 aa10.05□□□□□ -0.8
VAPB-203ENST00000463370 SLC25A39Q9BZJ4 359 aaPredicted RBP10.05□□□□□ -0.8
VAPB-203ENST00000463370 C7orf69Q9H7B7 122 aa10.05□□□□□ -0.8
VAPB-203ENST00000463370 BIN3Q9NQY0 253 aa10.05□□□□□ -0.8
VAPB-203ENST00000463370 HIGD1AQ9Y241 93 aa10.05□□□□□ -0.8
VAPB-203ENST00000463370 ZNF469Q96JG9 3925 aaPredicted RBP10.04□□□□□ -0.8
VAPB-203ENST00000463370 G3V318 75 aa10.04□□□□□ -0.8
VAPB-203ENST00000463370 GNG5P63218 68 aa10.04□□□□□ -0.8
VAPB-203ENST00000463370 TEX38Q6PEX7 206 aa10.04□□□□□ -0.8
VAPB-203ENST00000463370 MAPK1IP1LQ8NDC0 245 aa10.04□□□□□ -0.8
VAPB-203ENST00000463370 HIF1ANQ9NWT6 349 aa10.04□□□□□ -0.8
VAPB-203ENST00000463370 MRPL27Q9P0M9 148 aaKnown RBP10.04□□□□□ -0.8
VAPB-203ENST00000463370 A0A1W2PPQ1 181 aa10.04□□□□□ -0.8
VAPB-203ENST00000463370 C5orf52A6NGY3 159 aa10.04□□□□□ -0.8
VAPB-203ENST00000463370 C9JCJ5 164 aa10.04□□□□□ -0.8
VAPB-203ENST00000463370 AMY1AP04745 511 aa10.04□□□□□ -0.8
VAPB-203ENST00000463370 MYCNOSP40205 109 aa10.04□□□□□ -0.8
VAPB-203ENST00000463370 C5orf56Q8N8D9 126 aa10.04□□□□□ -0.8
VAPB-203ENST00000463370 ZNF491Q8N8L2 437 aa10.04□□□□□ -0.8
VAPB-203ENST00000463370 SGMS2Q8NHU3 365 aa10.04□□□□□ -0.8
VAPB-203ENST00000463370 TMUB1Q9BVT8 246 aa10.04□□□□□ -0.8
VAPB-203ENST00000463370 GNG4P50150 75 aa10.03□□□□□ -0.8
VAPB-203ENST00000463370 NHLRC2Q8NBF2 726 aa10.03□□□□□ -0.8
VAPB-203ENST00000463370 IGF2BP2-AS1Q96M15 143 aa10.03□□□□□ -0.8
VAPB-203ENST00000463370 OR5B12Q96R08 314 aa10.03□□□□□ -0.8
VAPB-203ENST00000463370 PYGO2Q9BRQ0 406 aa10.03□□□□□ -0.8
VAPB-203ENST00000463370 A0A096LNT2 108 aa10.03□□□□□ -0.8
VAPB-203ENST00000463370 TRAV34A0A0B4J273 112 aa10.03□□□□□ -0.8
VAPB-203ENST00000463370 OR2T8A6NH00 312 aa10.03□□□□□ -0.8
VAPB-203ENST00000463370 SLC17A3O00476 420 aa10.03□□□□□ -0.8
VAPB-203ENST00000463370 PHOX2AO14813 284 aa10.03□□□□□ -0.8
VAPB-203ENST00000463370 GNG7O60262 68 aa10.03□□□□□ -0.8
VAPB-203ENST00000463370 IGLV2-8P01709 118 aa10.03□□□□□ -0.8
VAPB-203ENST00000463370 IL4P05112 153 aa10.03□□□□□ -0.8
VAPB-203ENST00000463370 NBEAP1P0C6P0 100 aa10.03□□□□□ -0.8
VAPB-203ENST00000463370 PAX1P15863 534 aa10.03□□□□□ -0.8
VAPB-203ENST00000463370 USF2Q15853 346 aaPredicted RBP10.03□□□□□ -0.8
VAPB-203ENST00000463370 Q56UQ5 140 aa10.03□□□□□ -0.8
VAPB-203ENST00000463370 UNQ5815/PRO19632Q6UWF5 114 aa10.03□□□□□ -0.8
VAPB-203ENST00000463370 ZNF600Q6ZNG1 722 aa10.03□□□□□ -0.8
VAPB-203ENST00000463370 C21orf62Q9NYP8 219 aa10.03□□□□□ -0.8
VAPB-203ENST00000463370 ANKRD17O75179 2603 aaKnown RBP10.02□□□□□ -0.8
VAPB-203ENST00000463370 MDFIC2A0A1B0GVS7 189 aa10.02□□□□□ -0.8
VAPB-203ENST00000463370 TOMM40O96008 361 aa10.02□□□□□ -0.8
VAPB-203ENST00000463370 CD99P14209 185 aa10.02□□□□□ -0.8
VAPB-203ENST00000463370 MFAP4P55083 255 aa10.02□□□□□ -0.8
VAPB-203ENST00000463370 RNF125Q96EQ8 232 aa10.02□□□□□ -0.8
VAPB-203ENST00000463370 LINC00527Q9UJ94 153 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms