RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 C19orf12Q9NSK7 152 aa1.78□□□□□ -2.12
GPNMB-205ENST00000463011 PTPRSQ13332 1948 aa1.78□□□□□ -2.13
GPNMB-205ENST00000463011 TRGV10A0A0A0MS01 117 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 TRAV1-1A0A0B4J248 108 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 ODAMA1E959 279 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 TLCD2A6NGC4 264 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 E7EQ34 232 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 CXCL1P09341 107 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 NBEAP1P0C6P0 100 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 DYNLT1P63172 113 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 SURF2Q15527 256 aaPredicted RBP1.77□□□□□ -2.13
GPNMB-205ENST00000463011 TMEM128Q5BJH2 165 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 ZNF826PQ6ZT77 177 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 C9orf163Q8N9P6 203 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 PPTC7Q8NI37 304 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 PYDC1Q8WXC3 89 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 SLC50A1Q9BRV3 221 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 EFCAB11Q9BUY7 163 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 CCDC32Q9BV29 185 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 YIPF3Q9GZM5 350 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 LHFPL6Q9Y693 200 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 RIMBP3CA6NJZ7 1639 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 RIMBP3BA6NNM3 1639 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 RIMBP3Q9UFD9 1639 aa1.77□□□□□ -2.13
GPNMB-205ENST00000463011 PLXNB1O43157 2135 aa1.76□□□□□ -2.13
GPNMB-205ENST00000463011 DOCK3Q8IZD9 2030 aa1.76□□□□□ -2.13
GPNMB-205ENST00000463011 CD109Q6YHK3 1445 aa1.76□□□□□ -2.13
GPNMB-205ENST00000463011 SETD5Q9C0A6 1442 aa1.76□□□□□ -2.13
GPNMB-205ENST00000463011 ZNF106Q9H2Y7 1883 aaKnown RBP1.76□□□□□ -2.13
GPNMB-205ENST00000463011 MGST1P10620 155 aaKnown RBP1.76□□□□□ -2.13
GPNMB-205ENST00000463011 KRTAP10-1P60331 282 aa1.76□□□□□ -2.13
GPNMB-205ENST00000463011 PHF13Q86YI8 300 aaPredicted RBP1.76□□□□□ -2.13
GPNMB-205ENST00000463011 LINC00471Q8N535 108 aa1.76□□□□□ -2.13
GPNMB-205ENST00000463011 OR4D11Q8NGI4 311 aa1.76□□□□□ -2.13
GPNMB-205ENST00000463011 NPCDR1Q9BY65 106 aa1.76□□□□□ -2.13
GPNMB-205ENST00000463011 BCL2L10Q9HD36 194 aa1.76□□□□□ -2.13
GPNMB-205ENST00000463011 TAS2R4Q9NYW5 299 aa1.76□□□□□ -2.13
GPNMB-205ENST00000463011 SMARCA4P51532 1647 aa1.76□□□□□ -2.13
GPNMB-205ENST00000463011 DOCK6Q96HP0 2047 aa1.76□□□□□ -2.13
GPNMB-205ENST00000463011 CAMSAP2Q08AD1 1489 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 TECPR2O15040 1411 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 PRORSD1PA6NEY8 169 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 TIMM17BO60830 172 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 GADD45GO95257 159 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 TMBIM6P55061 237 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 ARPP19P56211 112 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 MSMO1Q15800 293 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 RTL8BQ17RB0 113 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 RNASE10Q5GAN6 216 aaKnown RBP1.75□□□□□ -2.13
GPNMB-205ENST00000463011 SPANXN5Q5MJ07 72 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 C1orf140Q5VVS0 124 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 PP632Q6XCG6 107 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 C3orf56Q8N813 242 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 ST6GALNAC3Q8NDV1 305 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 BORCS8Q96FH0 119 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 CARD19Q96LW7 228 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 SLC25A21Q9BQT8 299 aaPredicted RBP1.75□□□□□ -2.13
GPNMB-205ENST00000463011 ADAT1Q9BUB4 502 aaKnown RBP1.75□□□□□ -2.13
GPNMB-205ENST00000463011 RTL8AQ9BWD3 113 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 NHP2Q9NX24 153 aaKnown RBP1.75□□□□□ -2.13
GPNMB-205ENST00000463011 GINS2Q9Y248 185 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 ASB4Q9Y574 426 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 GLI3P10071 1580 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 GREB1Q4ZG55 1949 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 CPAMD8Q8IZJ3 1885 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 SDK2Q58EX2 2172 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 CEP164Q9UPV0 1460 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 ARHGAP32A7KAX9 2087 aa1.75□□□□□ -2.13
GPNMB-205ENST00000463011 CCDC88AQ3V6T2 1871 aa1.74□□□□□ -2.13
GPNMB-205ENST00000463011 LOC105371267A0A1B0GV96 52 aa1.74□□□□□ -2.13
GPNMB-205ENST00000463011 TRDV1A0A1B0GX56 115 aa1.74□□□□□ -2.13
GPNMB-205ENST00000463011 K7ERJ3 54 aa1.74□□□□□ -2.13
GPNMB-205ENST00000463011 ASAH2BP0C7U1 165 aa1.74□□□□□ -2.13
GPNMB-205ENST00000463011 GPX2P18283 190 aa1.74□□□□□ -2.13
GPNMB-205ENST00000463011 MYL5Q02045 173 aa1.74□□□□□ -2.13
GPNMB-205ENST00000463011 ZNF846Q147U1 533 aa1.74□□□□□ -2.13
GPNMB-205ENST00000463011 ELOBQ15370 118 aa1.74□□□□□ -2.13
GPNMB-205ENST00000463011 ALX1Q15699 326 aa1.74□□□□□ -2.13
GPNMB-205ENST00000463011 ESRGQ1W209 222 aa1.74□□□□□ -2.13
GPNMB-205ENST00000463011 EIF5AL1Q6IS14 154 aaKnown RBP1.74□□□□□ -2.13
GPNMB-205ENST00000463011 TOMM20LQ6UXN7 152 aa1.74□□□□□ -2.13
GPNMB-205ENST00000463011 SKA2Q8WVK7 121 aaPredicted RBP1.74□□□□□ -2.13
GPNMB-205ENST00000463011 ZC2HC1AQ96GY0 325 aa1.74□□□□□ -2.13
GPNMB-205ENST00000463011 TEX37Q96LM6 180 aa1.74□□□□□ -2.13
GPNMB-205ENST00000463011 LRTM1Q9HBL6 345 aa1.74□□□□□ -2.13
GPNMB-205ENST00000463011 POPDC3Q9HBV1 291 aa1.74□□□□□ -2.13
GPNMB-205ENST00000463011 TMEM106BQ9NUM4 274 aa1.74□□□□□ -2.13
GPNMB-205ENST00000463011 LAMTOR3Q9UHA4 124 aa1.74□□□□□ -2.13
GPNMB-205ENST00000463011 NUBP2Q9Y5Y2 271 aa1.74□□□□□ -2.13
GPNMB-205ENST00000463011 PLXND1Q9Y4D7 1925 aa1.74□□□□□ -2.13
GPNMB-205ENST00000463011 FUOMA2VDF0 154 aa1.73□□□□□ -2.13
GPNMB-205ENST00000463011 H7BYZ3 331 aa1.73□□□□□ -2.13
GPNMB-205ENST00000463011 CRPP02741 224 aa1.73□□□□□ -2.13
GPNMB-205ENST00000463011 HLA-EP13747 358 aa1.73□□□□□ -2.13
GPNMB-205ENST00000463011 PLCXD2Q0VAA5 305 aa1.73□□□□□ -2.13
GPNMB-205ENST00000463011 HRCT1Q6UXD1 115 aa1.73□□□□□ -2.13
GPNMB-205ENST00000463011 ANGPTL5Q86XS5 388 aa1.73□□□□□ -2.13
GPNMB-205ENST00000463011 LINC00301Q8NCQ3 95 aa1.73□□□□□ -2.13
GPNMB-205ENST00000463011 THEM6Q8WUY1 208 aa1.73□□□□□ -2.13
GPNMB-205ENST00000463011 ZNF714Q96N38 554 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms