RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 IFNA21P01568 189 aa1.68□□□□□ -2.14
SMC4-203ENST00000462668 PPIBP23284 216 aaKnown RBP1.68□□□□□ -2.14
SMC4-203ENST00000462668 CRHBPP24387 322 aa1.68□□□□□ -2.14
SMC4-203ENST00000462668 BLVRBP30043 206 aaPredicted RBP1.68□□□□□ -2.14
SMC4-203ENST00000462668 GABRA2P47869 451 aa1.68□□□□□ -2.14
SMC4-203ENST00000462668 ZNF2Q9BSG1 426 aaPredicted RBP1.68□□□□□ -2.14
SMC4-203ENST00000462668 UTP11Q9Y3A2 253 aaKnown RBP1.68□□□□□ -2.14
SMC4-203ENST00000462668 HEY1Q9Y5J3 304 aa1.68□□□□□ -2.14
SMC4-203ENST00000462668 NUBP2Q9Y5Y2 271 aa1.68□□□□□ -2.14
SMC4-203ENST00000462668 FBN1P35555 2871 aaKnown RBP1.68□□□□□ -2.14
SMC4-203ENST00000462668 EPPK1P58107 5090 aaKnown RBP1.68□□□□□ -2.14
SMC4-203ENST00000462668 ARRDC5A6NEK1 342 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 P0DMU3 169 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 FAM231AP0DMU4 169 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 FAM231CP0DMU5 169 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.67□□□□□ -2.14
SMC4-203ENST00000462668 ZNF561Q8N587 486 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 CNEP1R1Q8N9A8 125 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 OR8D2Q9GZM6 311 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 AMMECR1Q9Y4X0 333 aaPredicted RBP1.67□□□□□ -2.14
SMC4-203ENST00000462668 TRIOBPQ9H2D6 2365 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 ZNF462Q96JM2 2506 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 ZNF98A6NK75 572 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 K7EM74 188 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 GAS8-AS1O95177 125 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 PRR15Q8IV56 129 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 LYSMD1Q96S90 227 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 SERPINI1Q99574 410 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 RTL8AQ9BWD3 113 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 ENY2Q9NPA8 101 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 MARCOQ9UEW3 520 aaPredicted RBP1.67□□□□□ -2.14
SMC4-203ENST00000462668 FAM32AQ9Y421 112 aaKnown RBP1.67□□□□□ -2.14
SMC4-203ENST00000462668 NUP210Q8TEM1 1887 aaPredicted RBP1.67□□□□□ -2.14
SMC4-203ENST00000462668 AKAP13Q12802 2813 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 TRBV20OR9-2A0A075B6H5 130 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 SLC25A20O43772 301 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 DNAH10OSP0CZ25 163 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 LTC4SQ16873 150 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 AKR1C8PQ5T2L2 129 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 DEDD2Q8WXF8 326 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 CARD19Q96LW7 228 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 CYSLTR1Q9Y271 337 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 SVEP1Q4LDE5 3571 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 IGKV3D-20A0A0C4DH25 116 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 IGKV1-9A0A0C4DH69 117 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 COLCA2A8K830 154 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 KALRNO60229 2985 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 XCL1P47992 114 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 FOXF1Q12946 379 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 ARHGAP11BQ3KRB8 267 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 KTN1-AS1Q86SY8 53 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 ANKRD29Q8N6D5 301 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 H1FXQ92522 213 aaKnown RBP1.67□□□□□ -2.14
SMC4-203ENST00000462668 ULBP3Q9BZM4 244 aa1.67□□□□□ -2.14
SMC4-203ENST00000462668 EML5Q05BV3 1969 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 IGKV6D-41A0A0C4DH26 115 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 BUB1B-PAK6H3BSN5 160 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 RPL36A-HNRNPH2H7BZ11 118 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 LY6HO94772 140 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 FAM229BQ4G0N7 80 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 ZNF660Q6AZW8 331 aaPredicted RBP1.66□□□□□ -2.14
SMC4-203ENST00000462668 SPINT4Q6UDR6 99 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 TMEM136Q6ZRR5 245 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 OR4K13Q8NH42 304 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 NMNAT3Q96T66 252 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 MED29Q9NX70 200 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 ANK3Q12955 4377 aaKnown RBP1.66□□□□□ -2.14
SMC4-203ENST00000462668 HMCN1Q96RW7 5635 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 FRAS1Q86XX4 4008 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 TRAV41A0A0B4J266 112 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 ZNF14P17017 642 aaPredicted RBP1.66□□□□□ -2.14
SMC4-203ENST00000462668 RNASE4P34096 147 aaKnown RBP1.66□□□□□ -2.14
SMC4-203ENST00000462668 PSG9Q00887 426 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 GNA12Q03113 381 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 EBI3Q14213 229 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 SPCS2Q15005 226 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 AMTNQ6UX39 209 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 LCA10Q71F78 164 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 PLA2G2FQ9BZM2 168 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 SS18L2Q9UHA2 77 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 ERGIC3Q9Y282 383 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 GREB1Q4ZG55 1949 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 CROCCQ5TZA2 2017 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 CUL9Q8IWT3 2517 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 RPS3P23396 243 aaKnown RBP eCLIP1.66□□□□□ -2.14
SMC4-203ENST00000462668 PHBP35232 272 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 FLI1Q01543 452 aaPredicted RBP1.66□□□□□ -2.14
SMC4-203ENST00000462668 C3orf56Q8N813 242 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 TERB2Q8NHR7 220 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 RMND5BQ96G75 393 aaPredicted RBP1.66□□□□□ -2.14
SMC4-203ENST00000462668 IMUPQ9GZP8 106 aa1.66□□□□□ -2.14
SMC4-203ENST00000462668 C6orf62Q9GZU0 229 aaPredicted RBP1.66□□□□□ -2.14
SMC4-203ENST00000462668 TDRD6O60522 2096 aaKnown RBP1.65□□□□□ -2.14
SMC4-203ENST00000462668 A0A1B0GX51 115 aa1.65□□□□□ -2.14
SMC4-203ENST00000462668 RGS5O15539 181 aa1.65□□□□□ -2.14
SMC4-203ENST00000462668 DHFRP00374 187 aa1.65□□□□□ -2.14
SMC4-203ENST00000462668 SOD1P00441 154 aa1.65□□□□□ -2.14
SMC4-203ENST00000462668 NRASP01111 189 aa1.65□□□□□ -2.14
SMC4-203ENST00000462668 HRASP01112 189 aa1.65□□□□□ -2.14
SMC4-203ENST00000462668 KRASP01116 189 aa1.65□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms