RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 ZNF562Q6V9R5 426 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 PPP1R27Q86WC6 154 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 LRTM2Q8N967 370 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 OR5AU1Q8NGC0 362 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 OR51H1Q8NH63 302 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 RNASE8Q8TDE3 154 aaKnown RBP8.72□□□□□ -1.01
APTX-209ENST00000460940 ORAOV1Q8WV07 137 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 RPH3ALQ9UNE2 315 aa8.72□□□□□ -1.01
APTX-209ENST00000460940 A0A1B0GV50 99 aa8.71□□□□□ -1.01
APTX-209ENST00000460940 SRRM4A7MD48 611 aaKnown RBP8.71□□□□□ -1.01
APTX-209ENST00000460940 M0QZ24 198 aa8.71□□□□□ -1.01
APTX-209ENST00000460940 ATP6V0E1O15342 81 aa8.71□□□□□ -1.01
APTX-209ENST00000460940 SCGB1D1O95968 90 aa8.71□□□□□ -1.01
APTX-209ENST00000460940 CA2P00918 260 aa8.71□□□□□ -1.01
APTX-209ENST00000460940 PPBPP02775 128 aa8.71□□□□□ -1.01
APTX-209ENST00000460940 ATP6V0CP27449 155 aa8.71□□□□□ -1.01
APTX-209ENST00000460940 CEBPGP53567 150 aa8.71□□□□□ -1.01
APTX-209ENST00000460940 BRWD1-AS2P59051 145 aa8.71□□□□□ -1.01
APTX-209ENST00000460940 RPL23AP62750 156 aaKnown RBP8.71□□□□□ -1.01
APTX-209ENST00000460940 CX3CL1P78423 397 aa8.71□□□□□ -1.01
APTX-209ENST00000460940 OR5I1Q13606 314 aa8.71□□□□□ -1.01
APTX-209ENST00000460940 GNPNAT1Q96EK6 184 aaPredicted RBP8.71□□□□□ -1.01
APTX-209ENST00000460940 GPHA2Q96T91 129 aa8.71□□□□□ -1.01
APTX-209ENST00000460940 P2RX4Q99571 388 aa8.71□□□□□ -1.01
APTX-209ENST00000460940 SLC2A9Q9NRM0 540 aa8.71□□□□□ -1.01
APTX-209ENST00000460940 LINC01548A6NM66 108 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 TMEM238C9JI98 176 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 RAMP3O60896 148 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 TYMSP04818 313 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 SAA1P0DJI8 122 aaPredicted RBP8.7□□□□□ -1.02
APTX-209ENST00000460940 CD28P10747 220 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 F2RP25116 425 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 ELLP55199 621 aaPredicted RBP8.7□□□□□ -1.02
APTX-209ENST00000460940 VAMP2P63027 116 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 NDPQ00604 133 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 CFHR3Q02985 330 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 PRSS8Q16651 343 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 PHLDA2Q53GA4 152 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 TEX43Q6ZNM6 134 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 CCDC71LQ8N9Z2 235 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 NUDT10Q8NFP7 164 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 ARPC1AQ92747 370 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 C11orf1Q9H5F2 150 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 TPSG1Q9NRR2 321 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 TRAV41A0A0B4J266 112 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 C20orf202A1L168 122 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 FCN1O00602 326 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 ST8SIA3O43173 380 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 EWSR1Q01844 656 aaKnown RBP eCLIP8.7□□□□□ -1.02
APTX-209ENST00000460940 FOXE3Q13461 319 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 POU2AF1Q16633 256 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 TBC1D26Q86UD7 250 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 NDUFA11Q86Y39 141 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 MMD2Q8IY49 270 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 OR4A5Q8NH83 315 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 CLUHP3Q96NS8 147 aa8.7□□□□□ -1.02
APTX-209ENST00000460940 KBTBD11O94819 623 aa8.69□□□□□ -1.02
APTX-209ENST00000460940 CNIH1O95406 144 aa8.69□□□□□ -1.02
APTX-209ENST00000460940 IGHG4P01861 327 aa8.69□□□□□ -1.02
APTX-209ENST00000460940 ELANEP08246 267 aa8.69□□□□□ -1.02
APTX-209ENST00000460940 PIGPP57054 158 aa8.69□□□□□ -1.02
APTX-209ENST00000460940 TMEM267Q0VDI3 215 aaPredicted RBP8.69□□□□□ -1.02
APTX-209ENST00000460940 FXYD3Q14802 87 aa8.69□□□□□ -1.02
APTX-209ENST00000460940 RNF152Q8N8N0 203 aa8.69□□□□□ -1.02
APTX-209ENST00000460940 C11orf44Q8N8P7 122 aa8.69□□□□□ -1.02
APTX-209ENST00000460940 OR2D3Q8NGH3 330 aa8.69□□□□□ -1.02
APTX-209ENST00000460940 TMEM167AQ8TBQ9 72 aa8.69□□□□□ -1.02
APTX-209ENST00000460940 CITED2Q99967 270 aaPredicted RBP8.69□□□□□ -1.02
APTX-209ENST00000460940 RBKSQ9H477 322 aa8.69□□□□□ -1.02
APTX-209ENST00000460940 BET1LQ9NYM9 111 aa8.69□□□□□ -1.02
APTX-209ENST00000460940 LINC00527Q9UJ94 153 aa8.69□□□□□ -1.02
APTX-209ENST00000460940 TSSC4Q9Y5U2 329 aaPredicted RBP8.69□□□□□ -1.02
APTX-209ENST00000460940 MGAM2Q2M2H8 2515 aa8.69□□□□□ -1.02
APTX-209ENST00000460940 SERTM2A0A1B0GWG4 89 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 TCRBV4S1A1TA0A5B7 111 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 H0Y980 276 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 MPPED1O15442 326 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 ACTL6BO94805 426 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 S1PR2O95136 353 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 ERVK-16P61578 105 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 GNB1P62873 340 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 TMEM187Q14656 261 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 TMEM183BQ1AE95 376 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 C19orf54Q5BKX5 351 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 TCTEX1D4Q5JR98 221 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 PRR31Q5SQ13 230 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 ZNF329Q86UD4 541 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 ZNF430Q9H8G1 570 aaPredicted RBP8.68□□□□□ -1.02
APTX-209ENST00000460940 RCL1Q9Y2P8 373 aaKnown RBP8.68□□□□□ -1.02
APTX-209ENST00000460940 TOMM40O96008 361 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 BCL2P10415 239 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 RAB11AP62491 216 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 SSBP2P81877 361 aaPredicted RBP8.68□□□□□ -1.02
APTX-209ENST00000460940 ODF1Q14990 250 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 ECSCRQ19T08 205 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 MRGPRG-AS1Q2M3A8 158 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 CXorf66Q5JRM2 361 aaPredicted RBP8.68□□□□□ -1.02
APTX-209ENST00000460940 C10orf99Q6UWK7 81 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 VKORC1L1Q8N0U8 176 aa8.68□□□□□ -1.02
APTX-209ENST00000460940 OR51G1Q8NGK1 321 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms