RNA–Protein interactions for RNA: ENST00000460297.1

NME4-209, Transcript of NME/NM23 nucleoside diphosphate kinase 4, humanhuman

TSL 5

Gene NME4, Length 1,652 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME4-209ENST00000460297 SPSB3Q6PJ21 355 aa18.7■□□□□ 0.58
NME4-209ENST00000460297 IGHV3-35A0A0C4DH35 117 aa18.69■□□□□ 0.58
NME4-209ENST00000460297 CD28P10747 220 aa18.69■□□□□ 0.58
NME4-209ENST00000460297 M6PRP20645 277 aa18.69■□□□□ 0.58
NME4-209ENST00000460297 ARL3P36405 182 aa18.69■□□□□ 0.58
NME4-209ENST00000460297 TMEM41BQ5BJD5 291 aa18.69■□□□□ 0.58
NME4-209ENST00000460297 Q6ZRG5 221 aa18.69■□□□□ 0.58
NME4-209ENST00000460297 RPP25LQ8N5L8 163 aaKnown RBP18.69■□□□□ 0.58
NME4-209ENST00000460297 SCGB2A1O75556 95 aa18.69■□□□□ 0.58
NME4-209ENST00000460297 FABP1P07148 127 aa18.69■□□□□ 0.58
NME4-209ENST00000460297 RAB5CP51148 216 aa18.69■□□□□ 0.58
NME4-209ENST00000460297 ACOT6Q3I5F7 207 aaPredicted RBP18.69■□□□□ 0.58
NME4-209ENST00000460297 C18orf65Q6ZTR6 163 aa18.69■□□□□ 0.58
NME4-209ENST00000460297 C11orf44Q8N8P7 122 aa18.69■□□□□ 0.58
NME4-209ENST00000460297 MBP02144 154 aa18.68■□□□□ 0.58
NME4-209ENST00000460297 LGALS1P09382 135 aaKnown RBP18.68■□□□□ 0.58
NME4-209ENST00000460297 CDX1P47902 265 aaPredicted RBP18.68■□□□□ 0.58
NME4-209ENST00000460297 OR51G1Q8NGK1 321 aa18.68■□□□□ 0.58
NME4-209ENST00000460297 OR10G4Q8NGN3 311 aa18.68■□□□□ 0.58
NME4-209ENST00000460297 OR10G9Q8NGN4 311 aa18.68■□□□□ 0.58
NME4-209ENST00000460297 OR10G7Q8NGN6 311 aa18.68■□□□□ 0.58
NME4-209ENST00000460297 TMEM37Q8WXS4 190 aa18.68■□□□□ 0.58
NME4-209ENST00000460297 PEF1Q9UBV8 284 aaKnown RBP18.68■□□□□ 0.58
NME4-209ENST00000460297 BMPR1BO00238 502 aa18.67■□□□□ 0.58
NME4-209ENST00000460297 PATE2Q6UY27 113 aa18.67■□□□□ 0.58
NME4-209ENST00000460297 FAM213BQ8TBF2 198 aa18.67■□□□□ 0.58
NME4-209ENST00000460297 Q8WTZ3 238 aa18.67■□□□□ 0.58
NME4-209ENST00000460297 DOK5Q9P104 306 aa18.67■□□□□ 0.58
NME4-209ENST00000460297 PUS1Q9Y606 427 aaKnown RBP eCLIP18.67■□□□□ 0.58
NME4-209ENST00000460297 ZNF705EA8MWA4 302 aaPredicted RBP18.66■□□□□ 0.58
NME4-209ENST00000460297 I3L521 148 aa18.66■□□□□ 0.58
NME4-209ENST00000460297 OR2C1O95371 312 aa18.66■□□□□ 0.58
NME4-209ENST00000460297 NMBP08949 121 aa18.66■□□□□ 0.58
NME4-209ENST00000460297 PLP1P60201 277 aa18.66■□□□□ 0.58
NME4-209ENST00000460297 ZNF726P1Q15940 193 aa18.66■□□□□ 0.58
NME4-209ENST00000460297 ZNF600Q6ZNG1 722 aa18.66■□□□□ 0.58
NME4-209ENST00000460297 PRIMA1Q86XR5 153 aa18.66■□□□□ 0.58
NME4-209ENST00000460297 WI2-2373I1.2A0A1W2PRP0 233 aa18.66■□□□□ 0.58
NME4-209ENST00000460297 ORM2P19652 201 aa18.66■□□□□ 0.58
NME4-209ENST00000460297 KHDC1LQ5JSQ8 128 aa18.66■□□□□ 0.58
NME4-209ENST00000460297 FAM209BQ5JX69 171 aa18.66■□□□□ 0.58
NME4-209ENST00000460297 SSX7Q7RTT5 188 aa18.66■□□□□ 0.58
NME4-209ENST00000460297 A0A1B0GUS0 222 aa18.65■□□□□ 0.58
NME4-209ENST00000460297 EIF3GO75821 320 aaKnown RBP eCLIP18.65■□□□□ 0.583e-6■■■■□ 20.1
NME4-209ENST00000460297 IL4P05112 153 aa18.65■□□□□ 0.58
NME4-209ENST00000460297 LYZP61626 148 aa18.65■□□□□ 0.58
NME4-209ENST00000460297 DPPA3Q6W0C5 159 aa18.65■□□□□ 0.58
NME4-209ENST00000460297 OR1B1Q8NGR6 318 aa18.65■□□□□ 0.58
NME4-209ENST00000460297 RNF125Q96EQ8 232 aa18.65■□□□□ 0.58
NME4-209ENST00000460297 RCC1LQ96I51 464 aaKnown RBP18.65■□□□□ 0.58
NME4-209ENST00000460297 SEPSECSQ9HD40 501 aaKnown RBP18.65■□□□□ 0.58
NME4-209ENST00000460297 DNAJC4Q9NNZ3 241 aa18.65■□□□□ 0.58
NME4-209ENST00000460297 ATRQ13535 2644 aa18.65■□□□□ 0.58
NME4-209ENST00000460297 KRTAP10-3P60369 221 aa18.64■□□□□ 0.57
NME4-209ENST00000460297 RELQ04864 619 aaPredicted RBP18.64■□□□□ 0.57
NME4-209ENST00000460297 FAM122CQ6P4D5 195 aa18.64■□□□□ 0.57
NME4-209ENST00000460297 TOMM20LQ6UXN7 152 aa18.64■□□□□ 0.57
NME4-209ENST00000460297 CITED2Q99967 270 aaPredicted RBP18.64■□□□□ 0.57
NME4-209ENST00000460297 PBDC1Q9BVG4 233 aa18.64■□□□□ 0.57
NME4-209ENST00000460297 ZFAND3Q9H8U3 227 aa18.64■□□□□ 0.57
NME4-209ENST00000460297 COX7A2P2O60397 106 aa18.63■□□□□ 0.57
NME4-209ENST00000460297 OR5G3P0C626 314 aa18.63■□□□□ 0.57
NME4-209ENST00000460297 USF2Q15853 346 aaPredicted RBP18.63■□□□□ 0.57
NME4-209ENST00000460297 LRRC20Q8TCA0 184 aa18.63■□□□□ 0.57
NME4-209ENST00000460297 C4orf3Q8WVX3 66 aa18.63■□□□□ 0.57
NME4-209ENST00000460297 SAT2Q96F10 170 aaPredicted RBP18.63■□□□□ 0.57
NME4-209ENST00000460297 UHRF2Q96PU4 802 aa18.63■□□□□ 0.57
NME4-209ENST00000460297 SLC25A22Q9H936 323 aa18.63■□□□□ 0.57
NME4-209ENST00000460297 IGHV3OR16-8A0A075B7F1 116 aa18.63■□□□□ 0.57
NME4-209ENST00000460297 SEC14L6B5MCN3 397 aa18.63■□□□□ 0.57
NME4-209ENST00000460297 GGCTO75223 188 aaKnown RBP18.63■□□□□ 0.57
NME4-209ENST00000460297 HYPMO75409 117 aa18.63■□□□□ 0.57
NME4-209ENST00000460297 SPATA31B1PQ5VZV4 182 aa18.63■□□□□ 0.57
NME4-209ENST00000460297 OR1L4Q8NGR5 311 aa18.63■□□□□ 0.57
NME4-209ENST00000460297 GATAD1Q8WUU5 269 aa18.63■□□□□ 0.57
NME4-209ENST00000460297 WFDC12Q8WWY7 111 aa18.63■□□□□ 0.57
NME4-209ENST00000460297 FOXL1Q12952 345 aa18.62■□□□□ 0.57
NME4-209ENST00000460297 CLLU1Q5K131 121 aa18.62■□□□□ 0.57
NME4-209ENST00000460297 PXDC1Q5TGL8 231 aa18.62■□□□□ 0.57
NME4-209ENST00000460297 FAM78BQ5VT40 261 aa18.62■□□□□ 0.57
NME4-209ENST00000460297 C10orf113Q5VZT2 155 aa18.62■□□□□ 0.57
NME4-209ENST00000460297 KLHL30-AS1Q8NEE0 82 aa18.62■□□□□ 0.57
NME4-209ENST00000460297 PFDN5Q99471 154 aa18.62■□□□□ 0.57
NME4-209ENST00000460297 C19orf24Q9BVV8 132 aa18.62■□□□□ 0.57
NME4-209ENST00000460297 MRPL27Q9P0M9 148 aaKnown RBP18.62■□□□□ 0.57
NME4-209ENST00000460297 TENM1Q9UKZ4 2725 aa18.62■□□□□ 0.57
NME4-209ENST00000460297 IGHV4OR15-8A0A075B7B6 117 aa18.61■□□□□ 0.57
NME4-209ENST00000460297 A0A087WW49 117 aa18.61■□□□□ 0.57
NME4-209ENST00000460297 ELOA3CA0A087WX78 387 aaPredicted RBP18.61■□□□□ 0.57
NME4-209ENST00000460297 CDC34P49427 236 aaPredicted RBP18.61■□□□□ 0.57
NME4-209ENST00000460297 RAB14P61106 215 aa18.61■□□□□ 0.57
NME4-209ENST00000460297 DEFB136Q30KP8 78 aa18.61■□□□□ 0.57
NME4-209ENST00000460297 KRTAP24-1Q3LI83 254 aa18.61■□□□□ 0.57
NME4-209ENST00000460297 MORN5Q5VZ52 161 aa18.61■□□□□ 0.57
NME4-209ENST00000460297 RAB24Q969Q5 203 aa18.61■□□□□ 0.57
NME4-209ENST00000460297 ACTR3CQ9C0K3 210 aaPredicted RBP18.61■□□□□ 0.57
NME4-209ENST00000460297 RHOBP62745 196 aa18.6■□□□□ 0.57
NME4-209ENST00000460297 BLOC1S1P78537 153 aa18.6■□□□□ 0.57
NME4-209ENST00000460297 TSSC4Q9Y5U2 329 aaPredicted RBP18.6■□□□□ 0.57
NME4-209ENST00000460297 FBN1P35555 2871 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms